RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 RNF181Q9P0P0 153 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 SNCAIPQ9Y6H5 919 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 GOLGA6L9A6NEM1 432 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 KLK7P49862 253 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 ETF1P62495 437 aaKnown RBP18.41■□□□□ 0.54
CCDC40-201ENST00000269318 PRKG1Q13976 671 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 TMEM132BQ14DG7 1078 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 DLK2Q6UY11 383 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 NEK9Q8TD19 979 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 NACC1Q96RE7 527 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 RMDN3Q96TC7 470 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 NUP58Q9BVL2 599 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 NDST4Q9H3R1 872 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 ADGRG1Q9Y653 693 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 TRAF5O00463 557 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 HOXD13P35453 343 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 MTMR1Q13613 665 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 BMT2Q1RMZ1 405 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 EDRF1Q3B7T1 1238 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 FIGNQ5HY92 759 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 FKBP15Q5T1M5 1219 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 SNRNP48Q6IEG0 339 aaKnown RBP18.41■□□□□ 0.54
CCDC40-201ENST00000269318 NSMFQ6X4W1 530 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 SYT10Q6XYQ8 523 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 PPP4R3CPQ6ZMV5 832 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 PURBQ96QR8 312 aaKnown RBP18.41■□□□□ 0.54
CCDC40-201ENST00000269318 LXNQ9BS40 222 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 SYT17Q9BSW7 474 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 OLFML3Q9NRN5 406 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 TMOD4Q9NZQ9 345 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 LUC7L2Q9Y383 392 aaKnown RBP18.41■□□□□ 0.54
CCDC40-201ENST00000269318 COL4A3BPQ9Y5P4 624 aa18.41■□□□□ 0.54
CCDC40-201ENST00000269318 CCDC175P0C221 793 aa18.4■□□□□ 0.54
CCDC40-201ENST00000269318 YBX3P16989 372 aaKnown RBP eCLIP18.4■□□□□ 0.54
CCDC40-201ENST00000269318 MARSP56192 900 aaKnown RBP18.4■□□□□ 0.54
CCDC40-201ENST00000269318 BAATQ14032 418 aaPredicted RBP18.4■□□□□ 0.54
CCDC40-201ENST00000269318 VGLL4Q14135 290 aa18.4■□□□□ 0.54
CCDC40-201ENST00000269318 CYP26C1Q6V0L0 522 aa18.4■□□□□ 0.54
CCDC40-201ENST00000269318 OR8K1Q8NGG5 319 aa18.4■□□□□ 0.54
CCDC40-201ENST00000269318 BCAS3Q9H6U6 928 aa18.4■□□□□ 0.54
CCDC40-201ENST00000269318 PKD2L1Q9P0L9 805 aa18.4■□□□□ 0.54
CCDC40-201ENST00000269318 SIK3Q9Y2K2 1263 aa18.4■□□□□ 0.54
CCDC40-201ENST00000269318 MYPNQ86TC9 1320 aa18.39■□□□□ 0.54
CCDC40-201ENST00000269318 DDX39AO00148 427 aaKnown RBP18.39■□□□□ 0.53
CCDC40-201ENST00000269318 TBCAO75347 108 aaKnown RBP18.39■□□□□ 0.53
CCDC40-201ENST00000269318 GAP43P17677 238 aa18.39■□□□□ 0.53
CCDC40-201ENST00000269318 MAP3K9P80192 1104 aa18.39■□□□□ 0.53
CCDC40-201ENST00000269318 BANK1Q8NDB2 785 aa18.39■□□□□ 0.53
CCDC40-201ENST00000269318 MRPL44Q9H9J2 332 aaKnown RBP18.39■□□□□ 0.53
CCDC40-201ENST00000269318 KCND2Q9NZV8 630 aa18.39■□□□□ 0.53
CCDC40-201ENST00000269318 TRAF3IP3Q9Y228 551 aa18.39■□□□□ 0.53
CCDC40-201ENST00000269318 SPDYE16A6NNV3 312 aaPredicted RBP18.39■□□□□ 0.53
CCDC40-201ENST00000269318 ADM5C9JUS6 153 aa18.39■□□□□ 0.53
CCDC40-201ENST00000269318 CTIFO43310 598 aaKnown RBP18.39■□□□□ 0.53
CCDC40-201ENST00000269318 MYBP10242 640 aa18.39■□□□□ 0.53
CCDC40-201ENST00000269318 KNOP1Q1ED39 458 aaKnown RBP18.39■□□□□ 0.53
CCDC40-201ENST00000269318 XRRA1Q6P2D8 792 aa18.39■□□□□ 0.53
CCDC40-201ENST00000269318 MIER3Q7Z3K6 550 aa18.39■□□□□ 0.53
CCDC40-201ENST00000269318 RBM46Q8TBY0 533 aaKnown RBP18.39■□□□□ 0.53
CCDC40-201ENST00000269318 TEX13BQ9BXU2 312 aa18.39■□□□□ 0.53
CCDC40-201ENST00000269318 TBC1D22BQ9NU19 505 aa18.39■□□□□ 0.53
CCDC40-201ENST00000269318 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.39■□□□□ 0.53
CCDC40-201ENST00000269318 PHLPP2Q6ZVD8 1323 aa18.38■□□□□ 0.53
CCDC40-201ENST00000269318 A0A1W2PQJ5 194 aa18.38■□□□□ 0.53
CCDC40-201ENST00000269318 FANCGO15287 622 aa18.38■□□□□ 0.53
CCDC40-201ENST00000269318 GNA14O95837 355 aa18.38■□□□□ 0.53
CCDC40-201ENST00000269318 TRIM21P19474 475 aaKnown RBP18.38■□□□□ 0.53
CCDC40-201ENST00000269318 ZNF131P52739 623 aa18.38■□□□□ 0.53
CCDC40-201ENST00000269318 ARHGEF16Q5VV41 709 aa18.38■□□□□ 0.53
CCDC40-201ENST00000269318 WDR59Q6PJI9 974 aa18.38■□□□□ 0.53
CCDC40-201ENST00000269318 DCPSQ96C86 337 aaKnown RBP18.38■□□□□ 0.53
CCDC40-201ENST00000269318 IQCDQ96DY2 449 aa18.38■□□□□ 0.53
CCDC40-201ENST00000269318 POLD4Q9HCU8 107 aa18.38■□□□□ 0.53
CCDC40-201ENST00000269318 AGPAT5Q9NUQ2 364 aa18.38■□□□□ 0.53
CCDC40-201ENST00000269318 OTOFQ9HC10 1997 aa18.38■□□□□ 0.53
CCDC40-201ENST00000269318 P4HBP07237 508 aaKnown RBP18.37■□□□□ 0.53
CCDC40-201ENST00000269318 MYCLP12524 364 aaPredicted RBP18.37■□□□□ 0.53
CCDC40-201ENST00000269318 ZBED6P86452 979 aa18.37■□□□□ 0.53
CCDC40-201ENST00000269318 MEA1Q16626 185 aa18.37■□□□□ 0.53
CCDC40-201ENST00000269318 VSIG10LQ86VR7 867 aa18.37■□□□□ 0.53
CCDC40-201ENST00000269318 SULF1Q8IWU6 871 aa18.37■□□□□ 0.53
CCDC40-201ENST00000269318 CHP1Q99653 195 aa18.37■□□□□ 0.53
CCDC40-201ENST00000269318 HOXC10Q9NYD6 342 aa18.37■□□□□ 0.53
CCDC40-201ENST00000269318 LOC285556D6RIA3 1793 aa18.37■□□□□ 0.53
CCDC40-201ENST00000269318 PDXKO00764 312 aa18.37■□□□□ 0.53
CCDC40-201ENST00000269318 ATP9AO75110 1047 aa18.37■□□□□ 0.53
CCDC40-201ENST00000269318 PRPF6O94906 941 aaKnown RBP18.37■□□□□ 0.53
CCDC40-201ENST00000269318 GUCY2CP25092 1073 aa18.37■□□□□ 0.53
CCDC40-201ENST00000269318 C9orf131Q5VYM1 1079 aa18.37■□□□□ 0.53
CCDC40-201ENST00000269318 TRIM59Q8IWR1 403 aa18.37■□□□□ 0.53
CCDC40-201ENST00000269318 FIZ1Q96SL8 496 aa18.37■□□□□ 0.53
CCDC40-201ENST00000269318 ZSWIM4Q9H7M6 989 aa18.37■□□□□ 0.53
CCDC40-201ENST00000269318 LOXHD1Q8IVV2 1947 aa18.36■□□□□ 0.53
CCDC40-201ENST00000269318 PTPRFP10586 1907 aa18.36■□□□□ 0.53
CCDC40-201ENST00000269318 SFI1A8K8P3 1242 aa18.36■□□□□ 0.53
CCDC40-201ENST00000269318 FAM13AO94988 1023 aa18.36■□□□□ 0.53
CCDC40-201ENST00000269318 LYPLA2O95372 231 aa18.36■□□□□ 0.53
CCDC40-201ENST00000269318 ADAM9Q13443 819 aa18.36■□□□□ 0.53
CCDC40-201ENST00000269318 CCDC40Q4G0X9 1142 aa18.36■□□□□ 0.53
CCDC40-201ENST00000269318 MAF1Q9H063 256 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms