RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 NR1D1P20393 614 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 LSP1P33241 339 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 IFT88Q13099 833 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 ZNF211Q13398 564 aaPredicted RBP18.42■□□□□ 0.54
SQLE-201ENST00000265896 NBPF9Q3BBW0 867 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 ZCWPW2Q504Y3 356 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 NGLY1Q96IV0 654 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 SH3GL2Q99962 352 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 GGA1Q9UJY5 639 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 PCDHA1Q9Y5I3 950 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 DAPK3O43293 454 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 AADACL2Q6P093 401 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 U2AF1L4Q8WU68 220 aaKnown RBP18.42■□□□□ 0.54
SQLE-201ENST00000265896 SPATA31A5Q5VU36 1347 aa18.41■□□□□ 0.54
SQLE-201ENST00000265896 SPATA31A7Q8IWB4 1347 aa18.41■□□□□ 0.54
SQLE-201ENST00000265896 GPATCH11Q8N954 259 aa18.41■□□□□ 0.54
SQLE-201ENST00000265896 CUL5Q93034 780 aa18.41■□□□□ 0.54
SQLE-201ENST00000265896 SH2D3AQ9BRG2 576 aa18.41■□□□□ 0.54
SQLE-201ENST00000265896 KIAA1551Q9HCM1 1747 aa18.41■□□□□ 0.54
SQLE-201ENST00000265896 SCN7AQ01118 1682 aa18.41■□□□□ 0.54
SQLE-201ENST00000265896 LRRN2O75325 713 aa18.41■□□□□ 0.54
SQLE-201ENST00000265896 LCA5LO95447 670 aa18.41■□□□□ 0.54
SQLE-201ENST00000265896 PAK2Q13177 524 aa18.41■□□□□ 0.54
SQLE-201ENST00000265896 TMEM119Q4V9L6 283 aa18.41■□□□□ 0.54
SQLE-201ENST00000265896 ZC2HC1CQ53FD0 456 aaPredicted RBP18.41■□□□□ 0.54
SQLE-201ENST00000265896 MEI1Q5TIA1 1274 aa18.41■□□□□ 0.54
SQLE-201ENST00000265896 TRIM59Q8IWR1 403 aa18.41■□□□□ 0.54
SQLE-201ENST00000265896 IQCKQ8N0W5 287 aa18.41■□□□□ 0.54
SQLE-201ENST00000265896 INPP4AQ96PE3 977 aaPredicted RBP18.41■□□□□ 0.54
SQLE-201ENST00000265896 TRIM51Q9BSJ1 452 aa18.41■□□□□ 0.54
SQLE-201ENST00000265896 USP40Q9NVE5 1235 aa18.41■□□□□ 0.54
SQLE-201ENST00000265896 AKAP3O75969 853 aa18.4■□□□□ 0.54
SQLE-201ENST00000265896 MNAT1P51948 309 aa18.4■□□□□ 0.54
SQLE-201ENST00000265896 COG2Q14746 738 aa18.4■□□□□ 0.54
SQLE-201ENST00000265896 PRR5LQ6MZQ0 368 aa18.4■□□□□ 0.54
SQLE-201ENST00000265896 EFCAB13Q8IY85 973 aa18.4■□□□□ 0.54
SQLE-201ENST00000265896 TTI1O43156 1089 aa18.4■□□□□ 0.54
SQLE-201ENST00000265896 GDF11O95390 407 aa18.4■□□□□ 0.54
SQLE-201ENST00000265896 UCHL3P15374 230 aa18.4■□□□□ 0.54
SQLE-201ENST00000265896 ZNF543Q08ER8 600 aa18.4■□□□□ 0.54
SQLE-201ENST00000265896 ICE2Q659A1 982 aa18.4■□□□□ 0.54
SQLE-201ENST00000265896 ALKBH5Q6P6C2 394 aaKnown RBP18.4■□□□□ 0.54
SQLE-201ENST00000265896 DAAM2Q86T65 1068 aa18.4■□□□□ 0.54
SQLE-201ENST00000265896 CATSPER3Q86XQ3 398 aa18.4■□□□□ 0.54
SQLE-201ENST00000265896 CCDC65Q8IXS2 484 aa18.4■□□□□ 0.54
SQLE-201ENST00000265896 REEP2Q9BRK0 252 aa18.4■□□□□ 0.54
SQLE-201ENST00000265896 BHMT2Q9H2M3 363 aa18.4■□□□□ 0.54
SQLE-201ENST00000265896 PJA2O43164 708 aa18.39■□□□□ 0.54
SQLE-201ENST00000265896 GCNT3O95395 438 aa18.39■□□□□ 0.54
SQLE-201ENST00000265896 QRICH1Q2TAL8 776 aa18.39■□□□□ 0.54
SQLE-201ENST00000265896 TRAPPC3LQ5T215 181 aa18.39■□□□□ 0.54
SQLE-201ENST00000265896 METTL13Q8N6R0 699 aa18.39■□□□□ 0.54
SQLE-201ENST00000265896 USP38Q8NB14 1042 aa18.39■□□□□ 0.54
SQLE-201ENST00000265896 MDM1Q8TC05 714 aa18.39■□□□□ 0.54
SQLE-201ENST00000265896 A0A087WUV0 522 aaPredicted RBP18.39■□□□□ 0.53
SQLE-201ENST00000265896 CETN3O15182 167 aa18.39■□□□□ 0.53
SQLE-201ENST00000265896 SART1O43290 800 aaKnown RBP18.39■□□□□ 0.53
SQLE-201ENST00000265896 CTNNA1P35221 906 aaKnown RBP18.39■□□□□ 0.53
SQLE-201ENST00000265896 OTUD6BQ8N6M0 293 aa18.39■□□□□ 0.53
SQLE-201ENST00000265896 GOPCQ9HD26 462 aa18.39■□□□□ 0.53
SQLE-201ENST00000265896 RIC8AQ9NPQ8 531 aa18.39■□□□□ 0.53
SQLE-201ENST00000265896 GDF3Q9NR23 364 aa18.39■□□□□ 0.53
SQLE-201ENST00000265896 PKD2L1Q9P0L9 805 aa18.39■□□□□ 0.53
SQLE-201ENST00000265896 LEMD3Q9Y2U8 911 aa18.39■□□□□ 0.53
SQLE-201ENST00000265896 PNMA6FA0A0J9YX94 578 aa18.39■□□□□ 0.53
SQLE-201ENST00000265896 SSU72P8A0A1W2PR75 194 aa18.39■□□□□ 0.53
SQLE-201ENST00000265896 KRIT1O00522 736 aa18.39■□□□□ 0.53
SQLE-201ENST00000265896 HSD17B3P37058 310 aa18.39■□□□□ 0.53
SQLE-201ENST00000265896 RBM5P52756 815 aaKnown RBP eCLIP18.39■□□□□ 0.53
SQLE-201ENST00000265896 UBAP2Q5T6F2 1119 aaKnown RBP18.39■□□□□ 0.53
SQLE-201ENST00000265896 CERS5Q8N5B7 392 aa18.39■□□□□ 0.53
SQLE-201ENST00000265896 KCTD10Q9H3F6 313 aa18.39■□□□□ 0.53
SQLE-201ENST00000265896 ARMCX3Q9UH62 379 aaPredicted RBP18.39■□□□□ 0.53
SQLE-201ENST00000265896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.38■□□□□ 0.53
SQLE-201ENST00000265896 TMEM110-MUSTN1A8MSY1 372 aa18.38■□□□□ 0.53
SQLE-201ENST00000265896 PRLRP16471 622 aa18.38■□□□□ 0.53
SQLE-201ENST00000265896 HOXD13P35453 343 aa18.38■□□□□ 0.53
SQLE-201ENST00000265896 CTTNQ14247 550 aaKnown RBP18.38■□□□□ 0.53
SQLE-201ENST00000265896 ARHGAP44Q17R89 818 aa18.38■□□□□ 0.53
SQLE-201ENST00000265896 EXOC3L4Q17RC7 722 aa18.38■□□□□ 0.53
SQLE-201ENST00000265896 GLYCTKQ8IVS8 523 aa18.38■□□□□ 0.53
SQLE-201ENST00000265896 SERPINB13Q9UIV8 391 aa18.38■□□□□ 0.53
SQLE-201ENST00000265896 FBXL5Q9UKA1 691 aa18.38■□□□□ 0.53
SQLE-201ENST00000265896 TLDC2A0PJX2 215 aa18.38■□□□□ 0.53
SQLE-201ENST00000265896 TTLL1O95922 423 aa18.38■□□□□ 0.53
SQLE-201ENST00000265896 SPRED3Q2MJR0 410 aa18.38■□□□□ 0.53
SQLE-201ENST00000265896 GANQ9H2C0 597 aa18.38■□□□□ 0.53
SQLE-201ENST00000265896 NOC2LQ9Y3T9 749 aaKnown RBP18.38■□□□□ 0.53
SQLE-201ENST00000265896 PCDHA2Q9Y5H9 948 aa18.38■□□□□ 0.53
SQLE-201ENST00000265896 ROBO3Q96MS0 1386 aa18.38■□□□□ 0.53
SQLE-201ENST00000265896 TRIM49P0CI25 452 aa18.37■□□□□ 0.53
SQLE-201ENST00000265896 TRIM49CP0CI26 452 aa18.37■□□□□ 0.53
SQLE-201ENST00000265896 NMT1P30419 496 aaKnown RBP18.37■□□□□ 0.53
SQLE-201ENST00000265896 MRPL12P52815 198 aaKnown RBP18.37■□□□□ 0.53
SQLE-201ENST00000265896 PDIA5Q14554 519 aa18.37■□□□□ 0.53
SQLE-201ENST00000265896 UAP1Q16222 522 aaPredicted RBP18.37■□□□□ 0.53
SQLE-201ENST00000265896 CDC37Q16543 378 aaPredicted RBP18.37■□□□□ 0.53
SQLE-201ENST00000265896 ALS2CLQ60I27 953 aa18.37■□□□□ 0.53
SQLE-201ENST00000265896 KCNV1Q6PIU1 500 aa18.37■□□□□ 0.53
SQLE-201ENST00000265896 PEX26Q7Z412 305 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms