RNA–Protein interactions for RNA: ENST00000265732.9

RBM48-201, Transcript of RNA binding motif protein 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM48, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48-201ENST00000265732 PDXDC2PQ6P474 469 aa11.05□□□□□ -0.64
RBM48-201ENST00000265732 ABHD15Q6UXT9 468 aa11.05□□□□□ -0.64
RBM48-201ENST00000265732 CKAP2LQ8IYA6 745 aa11.05□□□□□ -0.64
RBM48-201ENST00000265732 KAT2BQ92831 832 aa11.05□□□□□ -0.64
RBM48-201ENST00000265732 ZNF302Q9NR11 478 aa11.05□□□□□ -0.64
RBM48-201ENST00000265732 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.05□□□□□ -0.64
RBM48-201ENST00000265732 TSHZ2Q9NRE2 1034 aa11.05□□□□□ -0.64
RBM48-201ENST00000265732 CEP131Q9UPN4 1083 aa11.05□□□□□ -0.64
RBM48-201ENST00000265732 MROH7Q68CQ1 1323 aa11.05□□□□□ -0.64
RBM48-201ENST00000265732 LAD1O00515 517 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 EVI5O60447 810 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 F13A1P00488 732 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 SF3A1Q15459 793 aaKnown RBP11.04□□□□□ -0.64
RBM48-201ENST00000265732 TRIM60Q495X7 471 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 NFRKBQ6P4R8 1299 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 CCDC60Q8IWA6 550 aaPredicted RBP11.04□□□□□ -0.64
RBM48-201ENST00000265732 RDM1Q8NG50 284 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 GABBR1Q9UBS5 961 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 VAV3Q9UKW4 847 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 GRIN2DO15399 1336 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 EMSYQ7Z589 1322 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 POTEMA6NI47 508 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 DCDC2CA8MYV0 355 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 LGR5O75473 907 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 BMP15O95972 392 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 RGS19P49795 217 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 RTP1P59025 263 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 DTHD1Q6ZMT9 781 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 PLPPR4Q7Z2D5 763 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 C4orf32Q8N8J7 132 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 TNPO1Q92973 898 aaKnown RBP11.04□□□□□ -0.64
RBM48-201ENST00000265732 PCYT2Q99447 389 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 SEZ6LQ9BYH1 1024 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 RAB34Q9BZG1 259 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 RNPEPQ9H4A4 650 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 TRPC6Q9Y210 931 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 NOD1Q9Y239 953 aa11.04□□□□□ -0.64
RBM48-201ENST00000265732 IGKV6D-21A0A0A0MT36 114 aa11.03□□□□□ -0.64
RBM48-201ENST00000265732 POTEB3A0JP26 581 aa11.03□□□□□ -0.64
RBM48-201ENST00000265732 EML1O00423 815 aa11.03□□□□□ -0.64
RBM48-201ENST00000265732 SLC26A2P50443 739 aa11.03□□□□□ -0.64
RBM48-201ENST00000265732 ATP2C1P98194 919 aaPredicted RBP11.03□□□□□ -0.64
RBM48-201ENST00000265732 TLE2Q04725 743 aa11.03□□□□□ -0.64
RBM48-201ENST00000265732 C1orf53Q5VUE5 145 aa11.03□□□□□ -0.64
RBM48-201ENST00000265732 POTEBQ6S5H4 581 aa11.03□□□□□ -0.64
RBM48-201ENST00000265732 BANK1Q8NDB2 785 aa11.03□□□□□ -0.64
RBM48-201ENST00000265732 AFAP1L1Q8TED9 768 aa11.03□□□□□ -0.64
RBM48-201ENST00000265732 ATP6V0A1Q93050 837 aa11.03□□□□□ -0.64
RBM48-201ENST00000265732 ZNF396Q96N95 335 aaPredicted RBP11.03□□□□□ -0.64
RBM48-201ENST00000265732 FTOQ9C0B1 505 aaKnown RBP eCLIP11.03□□□□□ -0.64
RBM48-201ENST00000265732 HDAC6Q9UBN7 1215 aa11.03□□□□□ -0.64
RBM48-201ENST00000265732 CLIC4Q9Y696 253 aa11.03□□□□□ -0.64
RBM48-201ENST00000265732 LOXHD1Q8IVV2 1947 aa11.02□□□□□ -0.64
RBM48-201ENST00000265732 LAMA3Q16787 3333 aa11.02□□□□□ -0.64
RBM48-201ENST00000265732 VWA3AA6NCI4 1184 aa11.02□□□□□ -0.65
RBM48-201ENST00000265732 HAS3O00219 553 aa11.02□□□□□ -0.65
RBM48-201ENST00000265732 TLR3O15455 904 aaKnown RBP11.02□□□□□ -0.65
RBM48-201ENST00000265732 BRD1O95696 1058 aa11.02□□□□□ -0.65
RBM48-201ENST00000265732 P4HBP07237 508 aaKnown RBP11.02□□□□□ -0.65
RBM48-201ENST00000265732 SMIM10L2AP0DMW4 78 aa11.02□□□□□ -0.65
RBM48-201ENST00000265732 SMIM10L2BP0DMW5 78 aa11.02□□□□□ -0.65
RBM48-201ENST00000265732 PRPHP41219 470 aa11.02□□□□□ -0.65
RBM48-201ENST00000265732 CDK7P50613 346 aa11.02□□□□□ -0.65
RBM48-201ENST00000265732 NUCB2P80303 420 aa11.02□□□□□ -0.65
RBM48-201ENST00000265732 CYP4A11Q02928 519 aa11.02□□□□□ -0.65
RBM48-201ENST00000265732 MLLT1Q03111 559 aaPredicted RBP11.02□□□□□ -0.65
RBM48-201ENST00000265732 SPIRE1Q08AE8 756 aa11.02□□□□□ -0.65
RBM48-201ENST00000265732 SNX17Q15036 470 aa11.02□□□□□ -0.65
RBM48-201ENST00000265732 B3GNT9Q6UX72 402 aa11.02□□□□□ -0.65
RBM48-201ENST00000265732 C7orf61Q8IZ16 206 aa11.02□□□□□ -0.65
RBM48-201ENST00000265732 USP28Q96RU2 1077 aa11.02□□□□□ -0.65
RBM48-201ENST00000265732 PRDM5Q9NQX1 630 aaPredicted RBP11.02□□□□□ -0.65
RBM48-201ENST00000265732 TRMT13Q9NUP7 481 aaKnown RBP11.02□□□□□ -0.65
RBM48-201ENST00000265732 TFIP11Q9UBB9 837 aaKnown RBP11.02□□□□□ -0.65
RBM48-201ENST00000265732 LRWD1Q9UFC0 647 aa11.02□□□□□ -0.65
RBM48-201ENST00000265732 PRKAG2Q9UGJ0 569 aa11.02□□□□□ -0.65
RBM48-201ENST00000265732 ATP6V1DQ9Y5K8 247 aa11.02□□□□□ -0.65
RBM48-201ENST00000265732 MAFBQ9Y5Q3 323 aaPredicted RBP11.02□□□□□ -0.65
RBM48-201ENST00000265732 C17orf102A2RUQ5 167 aa11.01□□□□□ -0.65
RBM48-201ENST00000265732 B4GALT4O60513 344 aa11.01□□□□□ -0.65
RBM48-201ENST00000265732 GNAT1P11488 350 aa11.01□□□□□ -0.65
RBM48-201ENST00000265732 NCLP19338 710 aaKnown RBP11.01□□□□□ -0.65
RBM48-201ENST00000265732 QARSP47897 775 aaKnown RBP11.01□□□□□ -0.65
RBM48-201ENST00000265732 FXR2P51116 673 aaKnown RBP eCLIP11.01□□□□□ -0.65
RBM48-201ENST00000265732 PSMC5P62195 406 aa11.01□□□□□ -0.65
RBM48-201ENST00000265732 IGBP1P78318 339 aa11.01□□□□□ -0.65
RBM48-201ENST00000265732 PPFIA1Q13136 1202 aa11.01□□□□□ -0.65
RBM48-201ENST00000265732 PLCB4Q15147 1175 aa11.01□□□□□ -0.65
RBM48-201ENST00000265732 EPHA7Q15375 998 aa11.01□□□□□ -0.65
RBM48-201ENST00000265732 PTGISQ16647 500 aa11.01□□□□□ -0.65
RBM48-201ENST00000265732 UGCGQ16739 394 aa11.01□□□□□ -0.65
RBM48-201ENST00000265732 ARL6IP4Q66PJ3 421 aaKnown RBP11.01□□□□□ -0.65
RBM48-201ENST00000265732 ANKRD33Q7Z3H0 272 aa11.01□□□□□ -0.65
RBM48-201ENST00000265732 TPH2Q8IWU9 490 aa11.01□□□□□ -0.65
RBM48-201ENST00000265732 SLC43A3Q8NBI5 491 aa11.01□□□□□ -0.65
RBM48-201ENST00000265732 ERMNQ8TAM6 284 aa11.01□□□□□ -0.65
RBM48-201ENST00000265732 TOX2Q96NM4 488 aa11.01□□□□□ -0.65
RBM48-201ENST00000265732 EIF2AK1Q9BQI3 630 aaKnown RBP11.01□□□□□ -0.65
RBM48-201ENST00000265732 TRPV6Q9H1D0 765 aa11.01□□□□□ -0.65
RBM48-201ENST00000265732 SETD4Q9NVD3 440 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms