RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 NUCKS1Q9H1E3 243 aaKnown RBP13.73□□□□□ -0.21
HERC6-201ENST00000264346 PDS5AQ29RF7 1337 aaKnown RBP13.72□□□□□ -0.21
HERC6-201ENST00000264346 NR3C1P04150 777 aa13.72□□□□□ -0.21
HERC6-201ENST00000264346 MYBP10242 640 aa13.72□□□□□ -0.21
HERC6-201ENST00000264346 TNNI1P19237 187 aa13.72□□□□□ -0.21
HERC6-201ENST00000264346 SLC9A1P19634 815 aa13.72□□□□□ -0.21
HERC6-201ENST00000264346 CTNNA2P26232 953 aa13.72□□□□□ -0.21
HERC6-201ENST00000264346 PSMD2Q13200 908 aa13.72□□□□□ -0.21
HERC6-201ENST00000264346 SH3RF1Q7Z6J0 888 aa13.72□□□□□ -0.21
HERC6-201ENST00000264346 MRRFQ96E11 262 aaKnown RBP13.72□□□□□ -0.21
HERC6-201ENST00000264346 EIF2AK1Q9BQI3 630 aaKnown RBP13.72□□□□□ -0.21
HERC6-201ENST00000264346 REEP2Q9BRK0 252 aa13.72□□□□□ -0.21
HERC6-201ENST00000264346 PAGR1Q9BTK6 254 aa13.72□□□□□ -0.21
HERC6-201ENST00000264346 PRR12Q9ULL5 1215 aa13.72□□□□□ -0.21
HERC6-201ENST00000264346 A0A1W2PQC6 194 aa13.72□□□□□ -0.21
HERC6-201ENST00000264346 HGSO14964 777 aaPredicted RBP13.72□□□□□ -0.21
HERC6-201ENST00000264346 POLD1P28340 1107 aa13.72□□□□□ -0.21
HERC6-201ENST00000264346 DCAF4Q8WV16 495 aa13.72□□□□□ -0.21
HERC6-201ENST00000264346 SELENOSQ9BQE4 189 aa13.72□□□□□ -0.21
HERC6-201ENST00000264346 RNF40O75150 1001 aa13.72□□□□□ -0.21
HERC6-201ENST00000264346 SHMT1P34896 483 aa13.72□□□□□ -0.21
HERC6-201ENST00000264346 PSMC6P62333 389 aa13.72□□□□□ -0.21
HERC6-201ENST00000264346 TBX2Q13207 712 aaPredicted RBP13.72□□□□□ -0.21
HERC6-201ENST00000264346 PNKPQ96T60 521 aa13.72□□□□□ -0.21
HERC6-201ENST00000264346 POLRMTO00411 1230 aaKnown RBP13.71□□□□□ -0.21
HERC6-201ENST00000264346 PEX3P56589 373 aa13.71□□□□□ -0.21
HERC6-201ENST00000264346 MESDQ14696 234 aa13.71□□□□□ -0.21
HERC6-201ENST00000264346 ZNF746Q6NUN9 644 aaPredicted RBP13.71□□□□□ -0.21
HERC6-201ENST00000264346 METTL14Q9HCE5 456 aaKnown RBP13.71□□□□□ -0.21
HERC6-201ENST00000264346 MED24O75448 989 aa13.71□□□□□ -0.21
HERC6-201ENST00000264346 SERPING1P05155 500 aa13.71□□□□□ -0.21
HERC6-201ENST00000264346 IL1R1P14778 569 aa13.71□□□□□ -0.21
HERC6-201ENST00000264346 PSMC2P35998 433 aaKnown RBP13.71□□□□□ -0.21
HERC6-201ENST00000264346 PDIA5Q14554 519 aa13.71□□□□□ -0.21
HERC6-201ENST00000264346 NPY5RQ15761 445 aa13.71□□□□□ -0.21
HERC6-201ENST00000264346 CCDC114Q96M63 670 aa13.71□□□□□ -0.21
HERC6-201ENST00000264346 AMFRQ9UKV5 643 aa13.71□□□□□ -0.21
HERC6-201ENST00000264346 GCLMP48507 274 aa13.71□□□□□ -0.22
HERC6-201ENST00000264346 PPP1R7Q15435 360 aa13.71□□□□□ -0.22
HERC6-201ENST00000264346 KNOP1Q1ED39 458 aaKnown RBP13.71□□□□□ -0.22
HERC6-201ENST00000264346 CEP85LQ5SZL2 805 aa13.71□□□□□ -0.22
HERC6-201ENST00000264346 GJB7Q6PEY0 223 aa13.71□□□□□ -0.22
HERC6-201ENST00000264346 CATSPER3Q86XQ3 398 aa13.71□□□□□ -0.22
HERC6-201ENST00000264346 NACC1Q96RE7 527 aa13.71□□□□□ -0.22
HERC6-201ENST00000264346 DUSP9Q99956 384 aaKnown RBP13.71□□□□□ -0.22
HERC6-201ENST00000264346 UBE2TQ9NPD8 197 aaPredicted RBP13.71□□□□□ -0.22
HERC6-201ENST00000264346 NFU1Q9UMS0 254 aa13.71□□□□□ -0.22
HERC6-201ENST00000264346 BAZ2AQ9UIF9 1905 aaKnown RBP13.7□□□□□ -0.22
HERC6-201ENST00000264346 N4BP1O75113 896 aaKnown RBP13.7□□□□□ -0.22
HERC6-201ENST00000264346 MYL7Q01449 175 aa13.7□□□□□ -0.22
HERC6-201ENST00000264346 CCDC93Q567U6 631 aa13.7□□□□□ -0.22
HERC6-201ENST00000264346 STRIP1Q5VSL9 837 aa13.7□□□□□ -0.22
HERC6-201ENST00000264346 ELOA2Q8IYF1 753 aaPredicted RBP13.7□□□□□ -0.22
HERC6-201ENST00000264346 TNFRSF25Q93038 417 aa13.7□□□□□ -0.22
HERC6-201ENST00000264346 RPGRIP1Q96KN7 1286 aa13.7□□□□□ -0.22
HERC6-201ENST00000264346 EIF3CLB5ME19 914 aaKnown RBP13.7□□□□□ -0.22
HERC6-201ENST00000264346 NDUFAB1O14561 156 aa13.7□□□□□ -0.22
HERC6-201ENST00000264346 BCRP11274 1271 aa13.7□□□□□ -0.22
HERC6-201ENST00000264346 SPP2Q13103 211 aa13.7□□□□□ -0.22
HERC6-201ENST00000264346 PAK2Q13177 524 aa13.7□□□□□ -0.22
HERC6-201ENST00000264346 POMGNT1Q8WZA1 660 aa13.7□□□□□ -0.22
HERC6-201ENST00000264346 PNMA5Q96PV4 448 aa13.7□□□□□ -0.22
HERC6-201ENST00000264346 EIF3CQ99613 913 aaKnown RBP13.7□□□□□ -0.22
HERC6-201ENST00000264346 RIOX1Q9H6W3 641 aa13.7□□□□□ -0.22
HERC6-201ENST00000264346 ZNF408Q9H9D4 720 aa13.7□□□□□ -0.22
HERC6-201ENST00000264346 IPO5O00410 1097 aaKnown RBP13.7□□□□□ -0.22
HERC6-201ENST00000264346 AP3B2Q13367 1082 aa13.7□□□□□ -0.22
HERC6-201ENST00000264346 HHIPL2Q6UWX4 724 aa13.7□□□□□ -0.22
HERC6-201ENST00000264346 GSTA5Q7RTV2 222 aa13.7□□□□□ -0.22
HERC6-201ENST00000264346 PAIP2Q9BPZ3 127 aaKnown RBP13.7□□□□□ -0.22
HERC6-201ENST00000264346 CHORDC1Q9UHD1 332 aaPredicted RBP13.7□□□□□ -0.22
HERC6-201ENST00000264346 FAM184BQ9ULE4 1060 aa13.7□□□□□ -0.22
HERC6-201ENST00000264346 ITIH6Q6UXX5 1313 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 EBAG9O00559 213 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 HNRNPDLO14979 420 aaKnown RBP13.69□□□□□ -0.22
HERC6-201ENST00000264346 CETN2P41208 172 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 MKRN4PQ13434 485 aaPredicted RBP13.69□□□□□ -0.22
HERC6-201ENST00000264346 CCDC26Q8TAB7 109 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 ZNF526Q8TF50 670 aaPredicted RBP13.69□□□□□ -0.22
HERC6-201ENST00000264346 COG1Q8WTW3 980 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 OSBPL9Q96SU4 736 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 LRRC1Q9BTT6 524 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 SYNCQ9H7C4 482 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 ANKFY1Q9P2R3 1169 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 ZBTB39O15060 712 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 SASH3O75995 380 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 APOBEC3HQ6NTF7 200 aaKnown RBP13.69□□□□□ -0.22
HERC6-201ENST00000264346 USP37Q86T82 979 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 LDHDQ86WU2 507 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 DAGLBQ8NCG7 672 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 IFT74Q96LB3 600 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 CAPN6Q9Y6Q1 641 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 LRRIQ4A6NIV6 560 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 LIG3P49916 1009 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 ZNF668Q96K58 619 aaPredicted RBP13.69□□□□□ -0.22
HERC6-201ENST00000264346 LXNQ9BS40 222 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 TAOK3Q9H2K8 898 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 BLOC1S4Q9NUP1 217 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 TMOD4Q9NZQ9 345 aa13.69□□□□□ -0.22
HERC6-201ENST00000264346 COL1A1P02452 1464 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms