RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 ZNF445P59923 1031 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 MTMR2Q13614 643 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 MTMR3Q13615 1198 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 AFG1LQ8WV93 481 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 SPATA33Q96N06 139 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 RNF146Q9NTX7 359 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 ABCC12Q96J65 1359 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 SLCO1A2P46721 670 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 IFNAR2P48551 515 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 MAP7D3Q8IWC1 876 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 AP1M1Q9BXS5 423 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 HACD3Q9P035 362 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 FAM8A1Q9UBU6 413 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 H7C1W4 665 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 CLEC10AQ8IUN9 316 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 SIRT2Q8IXJ6 389 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 SLC35F6Q8N357 371 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 FAM213AQ9BRX8 229 aa13.16□□□□□ -0.3
SPG11-201ENST00000261866 RPAP3Q9H6T3 665 aaPredicted RBP13.16□□□□□ -0.3
SPG11-201ENST00000261866 CHD1O14646 1710 aa13.15□□□□□ -0.3
SPG11-201ENST00000261866 PPP6R3Q5H9R7 873 aaPredicted RBP13.15□□□□□ -0.3
SPG11-201ENST00000261866 HABP4Q5JVS0 413 aaKnown RBP13.15□□□□□ -0.3
SPG11-201ENST00000261866 ARHGEF18Q6ZSZ5 1173 aa13.15□□□□□ -0.3
SPG11-201ENST00000261866 CDHR1Q96JP9 859 aa13.15□□□□□ -0.3
SPG11-201ENST00000261866 STRBPQ96SI9 672 aaKnown RBP13.15□□□□□ -0.3
SPG11-201ENST00000261866 IPO11Q9UI26 975 aaKnown RBP13.15□□□□□ -0.3
SPG11-201ENST00000261866 TMEM62Q0P6H9 643 aa13.15□□□□□ -0.3
SPG11-201ENST00000261866 TMEM206Q9H813 350 aa13.15□□□□□ -0.3
SPG11-201ENST00000261866 PNMA2Q9UL42 364 aa13.15□□□□□ -0.3
SPG11-201ENST00000261866 LMNB1P20700 586 aa13.15□□□□□ -0.3
SPG11-201ENST00000261866 ARL4AP40617 200 aa13.15□□□□□ -0.3
SPG11-201ENST00000261866 SGO2Q562F6 1265 aa13.15□□□□□ -0.3
SPG11-201ENST00000261866 RC3H1Q5TC82 1133 aaKnown RBP13.15□□□□□ -0.3
SPG11-201ENST00000261866 C1orf228Q6PIY5 440 aa13.15□□□□□ -0.3
SPG11-201ENST00000261866 POTEDQ86YR6 584 aa13.15□□□□□ -0.3
SPG11-201ENST00000261866 PDCD7Q8N8D1 485 aaKnown RBP13.15□□□□□ -0.3
SPG11-201ENST00000261866 STAP2Q9UGK3 403 aa13.15□□□□□ -0.3
SPG11-201ENST00000261866 SSH2Q76I76 1423 aa13.15□□□□□ -0.3
SPG11-201ENST00000261866 LRRD1A4D1F6 860 aa13.15□□□□□ -0.3
SPG11-201ENST00000261866 HOXC10Q9NYD6 342 aa13.15□□□□□ -0.3
SPG11-201ENST00000261866 WDR91A4D1P6 747 aa13.15□□□□□ -0.3
SPG11-201ENST00000261866 TRIM49BA6NDI0 452 aa13.15□□□□□ -0.3
SPG11-201ENST00000261866 PPP6R2O75170 966 aa13.15□□□□□ -0.3
SPG11-201ENST00000261866 MMEL1Q495T6 779 aa13.15□□□□□ -0.3
SPG11-201ENST00000261866 LAD1O00515 517 aa13.15□□□□□ -0.31
SPG11-201ENST00000261866 PRPSAP2O60256 369 aa13.15□□□□□ -0.31
SPG11-201ENST00000261866 PDZD8Q8NEN9 1154 aa13.15□□□□□ -0.31
SPG11-201ENST00000261866 RAET1EQ8TD07 263 aa13.15□□□□□ -0.31
SPG11-201ENST00000261866 NOC2LQ9Y3T9 749 aaKnown RBP13.15□□□□□ -0.31
SPG11-201ENST00000261866 CPP00450 1065 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 CTSHP09668 335 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 TMED2Q15363 201 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 SPDL1Q96EA4 605 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 GOLGA8CPA6NN73 597 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 SOX5P35711 763 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 MXI1P50539 228 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 RCN2Q14257 317 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 ZNF568Q3ZCX4 644 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 ZNF302Q9NR11 478 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 GABBR1Q9UBS5 961 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 HEXIM1O94992 359 aaKnown RBP13.14□□□□□ -0.31
SPG11-201ENST00000261866 GNGT1P63211 74 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 PSMD2Q13200 908 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 C10orf76Q5T2E6 689 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 PIDD1Q9HB75 910 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 GBP1P32455 592 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 GLYCTKQ8IVS8 523 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 ADGRF4Q8IZF3 695 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 MORC4Q8TE76 937 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 MIS12Q9H081 205 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 HECW2Q9P2P5 1572 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 INHBAP08476 426 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 NSUN2Q08J23 767 aaKnown RBP eCLIP13.14□□□□□ -0.31
SPG11-201ENST00000261866 EXOC8Q8IYI6 725 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 CCDC51Q96ER9 411 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 FRMD3A2A2Y4 597 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 SEC31AO94979 1220 aaKnown RBP13.14□□□□□ -0.31
SPG11-201ENST00000261866 ADORA2BP29275 332 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 PLTPP55058 493 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 BBS5Q8N3I7 341 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 PYCARDQ9ULZ3 195 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 ITM2BQ9Y287 266 aa13.14□□□□□ -0.31
SPG11-201ENST00000261866 ZNF157P51786 506 aaPredicted RBP13.13□□□□□ -0.31
SPG11-201ENST00000261866 THOC5Q13769 683 aaKnown RBP13.13□□□□□ -0.31
SPG11-201ENST00000261866 IQCB1Q15051 598 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 FEM1BQ9UK73 627 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 RNF123Q5XPI4 1314 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 PP2D1A8MPX8 630 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 ZBTB5O15062 677 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 PFDN6O15212 129 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 SAAL1Q96ER3 474 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 VCX3BQ9H321 246 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 NGRNQ9NPE2 291 aaKnown RBP13.13□□□□□ -0.31
SPG11-201ENST00000261866 POTEB3A0JP26 581 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 POTECB2RU33 542 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 MCF2LO15068 1137 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 MED7O43513 233 aa13.13□□□□□ -0.31
SPG11-201ENST00000261866 TROVE2P10155 538 aaKnown RBP eCLIP13.13□□□□□ -0.31
SPG11-201ENST00000261866 GARSP41250 739 aaKnown RBP13.13□□□□□ -0.31
SPG11-201ENST00000261866 SLC7A5Q01650 507 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms