RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 PTK2Q05397 1052 aa17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 CYP2W1Q8TAV3 490 aa17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 SYN2Q92777 582 aaPredicted RBP17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 KRT12Q99456 494 aa17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 IKZF4Q9H2S9 585 aa17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 HDAC9Q9UKV0 1011 aa17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 CETN3O15182 167 aa17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 KRT14P02533 472 aa17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 ARHGAP4P98171 946 aa17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 SPIRE1Q08AE8 756 aa17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 KCNA1Q09470 495 aa17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 GIT2Q14161 759 aa17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 ASIC2Q16515 512 aa17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 SLFN13Q68D06 897 aa17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 FOXR2Q6PJQ5 311 aa17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 SFR1Q86XK3 245 aa17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 SP8Q8IXZ3 490 aa17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 PROCA1Q8NCQ7 364 aaPredicted RBP17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 REEP2Q9BRK0 252 aa17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 QTRT2Q9H974 415 aaKnown RBP17.98■□□□□ 0.47
TM9SF1-201ENST00000261789 GRID2IPA4D2P6 1211 aa17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 FAM86B1E9PN63 330 aa17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 HEXIM1O94992 359 aaKnown RBP17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 GNA14O95837 355 aa17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 FAM86B2P0C5J1 330 aa17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 MARSP56192 900 aaKnown RBP17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 DCAF17Q5H9S7 520 aaPredicted RBP17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 ZNF571Q7Z3V5 609 aaPredicted RBP17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 KIAA0825Q8IV33 1275 aa17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 NUCKS1Q9H1E3 243 aaKnown RBP17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 DBNDD1Q9H9R9 158 aa17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 SFI1A8K8P3 1242 aa17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 SPATA31C1P0DKV0 1188 aa17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 USP11P51784 963 aa17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 GUCY2FP51841 1108 aa17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 TTMPQ5BVD1 217 aa17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 MEI1Q5TIA1 1274 aa17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 KCTD16Q68DU8 428 aa17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 SIAH1Q8IUQ4 282 aa17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 ETNPPLQ8TBG4 499 aa17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 TEKT1Q969V4 418 aa17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 AIPL1Q9NZN9 384 aa17.97■□□□□ 0.47
TM9SF1-201ENST00000261789 FRMD3A2A2Y4 597 aa17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 G3V3G9 751 aa17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 GDF11O95390 407 aa17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 HOXA13P31271 388 aaPredicted RBP17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 CASP4P49662 377 aa17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 DCAF8Q5TAQ9 597 aa17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 IRF2BP2Q7Z5L9 587 aa17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 SH2D3CQ8N5H7 860 aa17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 ZIM3Q96PE6 472 aa17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 RASSF4Q9H2L5 321 aa17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 AJAP1Q9UKB5 411 aaPredicted RBP17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 BRWD3Q6RI45 1802 aa17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 CLIC2O15247 247 aa17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 POLD1P28340 1107 aa17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 IRAK1P51617 712 aa17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 IKQ13123 557 aaPredicted RBP17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 TCERG1LQ5VWI1 586 aa17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 EMBQ6PCB8 327 aa17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 GJB7Q6PEY0 223 aa17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 KLHL7Q8IXQ5 586 aa17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 RBM46Q8TBY0 533 aaKnown RBP17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 PCDHGC5Q9Y5F6 944 aa17.96■□□□□ 0.47
TM9SF1-201ENST00000261789 PPFIA4O75335 1185 aa17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 AKAP3O75969 853 aa17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 UCHL3P15374 230 aa17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 CRKP46108 304 aa17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 RBM5P52756 815 aaKnown RBP eCLIP17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 CERKLQ49MI3 558 aaPredicted RBP17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 DPY19L2P1Q6NXN4 242 aa17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 LENG9Q96B70 501 aa17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 SPAG5Q96R06 1193 aa17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 SH3GL2Q99962 352 aa17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 ARMCX3Q9UH62 379 aaPredicted RBP17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 SMCHD1A6NHR9 2005 aa17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 UBR3Q6ZT12 1888 aa17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 CYP3A7-CYP3A51PA0A087WV96 503 aa17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 CYP3A7P24462 503 aa17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 PON1P27169 355 aa17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 KNOP1Q1ED39 458 aaKnown RBP17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 CCDC43Q96MW1 224 aaKnown RBP17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 INPP4AQ96PE3 977 aaPredicted RBP17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 BHMT2Q9H2M3 363 aa17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 RGL1Q9NZL6 768 aa17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 TSKSQ9UJT2 592 aa17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 DNM3Q9UQ16 869 aa17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 LTBP1Q14766 1721 aa17.95■□□□□ 0.46
TM9SF1-201ENST00000261789 KCNK3O14649 394 aa17.94■□□□□ 0.46
TM9SF1-201ENST00000261789 SHOX2O60902 331 aaPredicted RBP17.94■□□□□ 0.46
TM9SF1-201ENST00000261789 HSF2BPO75031 334 aa17.94■□□□□ 0.46
TM9SF1-201ENST00000261789 NOP2P46087 812 aaKnown RBP17.94■□□□□ 0.46
TM9SF1-201ENST00000261789 EDRF1Q3B7T1 1238 aa17.94■□□□□ 0.46
TM9SF1-201ENST00000261789 SH3BP5LQ7L8J4 393 aa17.94■□□□□ 0.46
TM9SF1-201ENST00000261789 ZC3H3Q8IXZ2 948 aaKnown RBP17.94■□□□□ 0.46
TM9SF1-201ENST00000261789 IFT20Q8IY31 132 aa17.94■□□□□ 0.46
TM9SF1-201ENST00000261789 SLFN12Q8IYM2 578 aa17.94■□□□□ 0.46
TM9SF1-201ENST00000261789 CASKIN2Q8WXE0 1202 aa17.94■□□□□ 0.46
TM9SF1-201ENST00000261789 CRYGNQ8WXF5 182 aa17.94■□□□□ 0.46
TM9SF1-201ENST00000261789 RUFY1Q96T51 708 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms