RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 TRAPPC10P48553 1259 aa15.38■□□□□ 0.05
CUX2-201ENST00000261726 ZC3H12BQ5HYM0 836 aaKnown RBP15.38■□□□□ 0.05
CUX2-201ENST00000261726 DSTYKQ6XUX3 929 aa15.38■□□□□ 0.05
CUX2-201ENST00000261726 EXOC8Q8IYI6 725 aa15.38■□□□□ 0.05
CUX2-201ENST00000261726 NOVA2Q9UNW9 492 aaKnown RBP15.38■□□□□ 0.05
CUX2-201ENST00000261726 ZBED1O96006 694 aa15.37■□□□□ 0.05
CUX2-201ENST00000261726 HDLBPQ00341 1268 aaKnown RBP15.37■□□□□ 0.05
CUX2-201ENST00000261726 TRIM15Q9C019 465 aa15.37■□□□□ 0.05
CUX2-201ENST00000261726 SPATS2LQ9NUQ6 558 aaKnown RBP15.37■□□□□ 0.05
CUX2-201ENST00000261726 C1orf228Q6PIY5 440 aa15.37■□□□□ 0.05
CUX2-201ENST00000261726 ZBTB38Q8NAP3 1195 aaPredicted RBP15.37■□□□□ 0.05
CUX2-201ENST00000261726 PIK3C2GO75747 1445 aa15.37■□□□□ 0.05
CUX2-201ENST00000261726 HSPA4LO95757 839 aa15.37■□□□□ 0.05
CUX2-201ENST00000261726 HLA-DPA1P20036 260 aa15.37■□□□□ 0.05
CUX2-201ENST00000261726 TRIML2Q8N7C3 387 aa15.37■□□□□ 0.05
CUX2-201ENST00000261726 JPH2Q9BR39 696 aaPredicted RBP15.37■□□□□ 0.05
CUX2-201ENST00000261726 RRP15Q9Y3B9 282 aaKnown RBP15.37■□□□□ 0.05
CUX2-201ENST00000261726 ZNF804BA4D1E1 1349 aa15.37■□□□□ 0.05
CUX2-201ENST00000261726 TTLL1O95922 423 aa15.37■□□□□ 0.05
CUX2-201ENST00000261726 UPF3AQ9H1J1 476 aaKnown RBP15.37■□□□□ 0.05
CUX2-201ENST00000261726 ZSWIM6Q9HCJ5 1215 aa15.37■□□□□ 0.05
CUX2-201ENST00000261726 TSR3Q9UJK0 312 aaKnown RBP15.37■□□□□ 0.05
CUX2-201ENST00000261726 KDM5AP29375 1690 aaKnown RBP15.37■□□□□ 0.05
CUX2-201ENST00000261726 A0A087WWV3 80 aa15.37■□□□□ 0.05
CUX2-201ENST00000261726 E2F6O75461 281 aa15.37■□□□□ 0.05
CUX2-201ENST00000261726 HSPA6P17066 643 aa15.37■□□□□ 0.05
CUX2-201ENST00000261726 NNTQ13423 1086 aa15.37■□□□□ 0.05
CUX2-201ENST00000261726 TBCKQ8TEA7 893 aa15.37■□□□□ 0.05
CUX2-201ENST00000261726 KCNQ3O43525 872 aa15.37■□□□□ 0.05
CUX2-201ENST00000261726 ANP32DO95626 131 aa15.37■□□□□ 0.05
CUX2-201ENST00000261726 ADORA1P30542 326 aa15.37■□□□□ 0.05
CUX2-201ENST00000261726 PDCD6IPQ8WUM4 868 aaKnown RBP15.37■□□□□ 0.05
CUX2-201ENST00000261726 SOS2Q07890 1332 aaPredicted RBP15.36■□□□□ 0.05
CUX2-201ENST00000261726 FAM95CA0A1B0GW59 222 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 SOWAHDA6NJG2 315 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 M0R2C6 588 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 PHKA1P46020 1223 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 FLOT2Q14254 428 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 GPT2Q8TD30 523 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 PYROXD1Q8WU10 500 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 LZICQ8WZA0 190 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 COA7Q96BR5 231 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 FAF2Q96CS3 445 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 MAGEF1Q9HAY2 307 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 OCM2P0CE71 109 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 OCMP0CE72 109 aaPredicted RBP15.36■□□□□ 0.05
CUX2-201ENST00000261726 DAB2P98082 770 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 DRP2Q13474 957 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 PKP1Q13835 747 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 ASPRV1Q53RT3 343 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 CHAMP1Q96JM3 812 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 ZBTB18Q99592 522 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 ZC4H2Q9NQZ6 224 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 SPTLC3Q9NUV7 552 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 DYNLL1P63167 89 aaKnown RBP15.36■□□□□ 0.05
CUX2-201ENST00000261726 RABGGTAQ92696 567 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 N4BP2L2Q92802 583 aaPredicted RBP15.36■□□□□ 0.05
CUX2-201ENST00000261726 EAF2Q96CJ1 260 aaPredicted RBP15.36■□□□□ 0.05
CUX2-201ENST00000261726 MRFAP1L1Q96HT8 127 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 GREM2Q9H772 168 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 PCDHA5Q9Y5H7 936 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 WDR17Q8IZU2 1322 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 ACSL3O95573 720 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 SNAP25P60880 206 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 PIGSQ96S52 555 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 ADD3Q9UEY8 706 aaKnown RBP15.36■□□□□ 0.05
CUX2-201ENST00000261726 MAN2A1Q16706 1144 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 ARL13BQ3SXY8 428 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 NLRP4Q96MN2 994 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 TMEM206Q9H813 350 aa15.36■□□□□ 0.05
CUX2-201ENST00000261726 RPF1Q9H9Y2 349 aaKnown RBP15.36■□□□□ 0.05
CUX2-201ENST00000261726 KITP10721 976 aa15.35■□□□□ 0.05
CUX2-201ENST00000261726 RAP1GDS1P52306 607 aa15.35■□□□□ 0.05
CUX2-201ENST00000261726 DHTKD1Q96HY7 919 aaPredicted RBP15.35■□□□□ 0.05
CUX2-201ENST00000261726 NHEJ1Q9H9Q4 299 aaPredicted RBP15.35■□□□□ 0.05
CUX2-201ENST00000261726 DR1Q01658 176 aa15.35■□□□□ 0.05
CUX2-201ENST00000261726 ANO4Q32M45 955 aa15.35■□□□□ 0.05
CUX2-201ENST00000261726 USPL1Q5W0Q7 1092 aa15.35■□□□□ 0.05
CUX2-201ENST00000261726 COG4Q9H9E3 785 aa15.35■□□□□ 0.05
CUX2-201ENST00000261726 F5H423 210 aaPredicted RBP15.35■□□□□ 0.05
CUX2-201ENST00000261726 RASGRF2O14827 1237 aa15.35■□□□□ 0.05
CUX2-201ENST00000261726 DBNDD1Q9H9R9 158 aa15.35■□□□□ 0.05
CUX2-201ENST00000261726 TRPC5Q9UL62 973 aaPredicted RBP15.35■□□□□ 0.05
CUX2-201ENST00000261726 IQANK1A0A1B0GTG1 560 aa15.35■□□□□ 0.05
CUX2-201ENST00000261726 SYCE1LA8MT33 242 aa15.35■□□□□ 0.05
CUX2-201ENST00000261726 LAD1O00515 517 aa15.35■□□□□ 0.05
CUX2-201ENST00000261726 TAC1P20366 129 aa15.35■□□□□ 0.05
CUX2-201ENST00000261726 UBE2SQ16763 222 aa15.35■□□□□ 0.05
CUX2-201ENST00000261726 ZNF658Q5TYW1 1059 aaPredicted RBP15.35■□□□□ 0.05
CUX2-201ENST00000261726 SNX2O60749 519 aa15.35■□□□□ 0.05
CUX2-201ENST00000261726 FMNL1O95466 1100 aaPredicted RBP15.35■□□□□ 0.05
CUX2-201ENST00000261726 RNF219Q5W0B1 726 aaPredicted RBP15.35■□□□□ 0.05
CUX2-201ENST00000261726 DHX38Q92620 1227 aaKnown RBP15.35■□□□□ 0.05
CUX2-201ENST00000261726 TTC17Q96AE7 1141 aa15.35■□□□□ 0.05
CUX2-201ENST00000261726 EDEM3Q9BZQ6 932 aa15.35■□□□□ 0.05
CUX2-201ENST00000261726 OR6B3Q8NGW1 331 aa15.34■□□□□ 0.05
CUX2-201ENST00000261726 CCHCR1Q8TD31 782 aa15.34■□□□□ 0.05
CUX2-201ENST00000261726 SMYD3Q9H7B4 428 aa15.34■□□□□ 0.05
CUX2-201ENST00000261726 PSMA2P25787 234 aa15.34■□□□□ 0.05
CUX2-201ENST00000261726 PPARGP37231 505 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms