RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 TNNC1P63316 161 aa21.21■□□□□ 0.99
SCARB1-201ENST00000261693 CEP85LQ5SZL2 805 aa21.21■□□□□ 0.99
SCARB1-201ENST00000261693 KDM7AQ6ZMT4 941 aa21.21■□□□□ 0.99
SCARB1-201ENST00000261693 FAM170AA1A519 330 aa21.21■□□□□ 0.99
SCARB1-201ENST00000261693 INPP5BP32019 993 aa21.21■□□□□ 0.99
SCARB1-201ENST00000261693 ERVK-9P63128 1117 aa21.21■□□□□ 0.99
SCARB1-201ENST00000261693 GTF2IP78347 998 aa21.21■□□□□ 0.99
SCARB1-201ENST00000261693 C15orf52Q6ZUT6 534 aaKnown RBP21.21■□□□□ 0.99
SCARB1-201ENST00000261693 IRF2BP2Q7Z5L9 587 aa21.21■□□□□ 0.99
SCARB1-201ENST00000261693 POLLQ9UGP5 575 aa21.21■□□□□ 0.99
SCARB1-201ENST00000261693 GAKO14976 1311 aa21.21■□□□□ 0.99
SCARB1-201ENST00000261693 ZNF831Q5JPB2 1677 aa21.2■□□□□ 0.98
SCARB1-201ENST00000261693 ZBTB5O15062 677 aa21.2■□□□□ 0.98
SCARB1-201ENST00000261693 HPDP32754 393 aaPredicted RBP21.2■□□□□ 0.98
SCARB1-201ENST00000261693 PSMC6P62333 389 aa21.2■□□□□ 0.98
SCARB1-201ENST00000261693 GABPAQ06546 454 aa21.2■□□□□ 0.98
SCARB1-201ENST00000261693 DCAF17Q5H9S7 520 aaPredicted RBP21.2■□□□□ 0.98
SCARB1-201ENST00000261693 HYIQ5T013 277 aa21.2■□□□□ 0.98
SCARB1-201ENST00000261693 FBXW10Q5XX13 1052 aa21.2■□□□□ 0.98
SCARB1-201ENST00000261693 SLF2Q8IX21 1173 aa21.2■□□□□ 0.98
SCARB1-201ENST00000261693 MREGQ8N565 214 aa21.2■□□□□ 0.98
SCARB1-201ENST00000261693 OR2W6PQ8NHA6 318 aa21.2■□□□□ 0.98
SCARB1-201ENST00000261693 WHAMMQ8TF30 809 aa21.2■□□□□ 0.98
SCARB1-201ENST00000261693 FAM163AQ96GL9 167 aaPredicted RBP21.2■□□□□ 0.98
SCARB1-201ENST00000261693 IGKV6D-41A0A0C4DH26 115 aa21.2■□□□□ 0.98
SCARB1-201ENST00000261693 KIF4AO95239 1232 aa21.2■□□□□ 0.98
SCARB1-201ENST00000261693 UCHL3P15374 230 aa21.2■□□□□ 0.98
SCARB1-201ENST00000261693 HOXA7P31268 230 aaPredicted RBP21.2■□□□□ 0.98
SCARB1-201ENST00000261693 SEC24CP53992 1094 aa21.2■□□□□ 0.98
SCARB1-201ENST00000261693 PPP1R18Q6NYC8 613 aa21.2■□□□□ 0.98
SCARB1-201ENST00000261693 C6orf229H3BNL8 230 aa21.19■□□□□ 0.98
SCARB1-201ENST00000261693 ATP6V1G3Q96LB4 118 aa21.19■□□□□ 0.98
SCARB1-201ENST00000261693 PLIN4Q96Q06 1357 aa21.19■□□□□ 0.98
SCARB1-201ENST00000261693 GCFC2P16383 781 aaKnown RBP21.19■□□□□ 0.98
SCARB1-201ENST00000261693 ATP2B4P23634 1241 aa21.19■□□□□ 0.98
SCARB1-201ENST00000261693 SLC12A3P55017 1021 aa21.19■□□□□ 0.98
SCARB1-201ENST00000261693 PABPC4Q13310 644 aaKnown RBP eCLIP21.19■□□□□ 0.986e-20■□□□□ 9.8
SCARB1-201ENST00000261693 TRAPPC3LQ5T215 181 aa21.19■□□□□ 0.98
SCARB1-201ENST00000261693 PRR5LQ6MZQ0 368 aa21.19■□□□□ 0.98
SCARB1-201ENST00000261693 RBM46Q8TBY0 533 aaKnown RBP21.19■□□□□ 0.98
SCARB1-201ENST00000261693 TAF1DQ9H5J8 278 aaPredicted RBP21.19■□□□□ 0.98
SCARB1-201ENST00000261693 BCAS3Q9H6U6 928 aa21.19■□□□□ 0.98
SCARB1-201ENST00000261693 TMEM59LQ9UK28 342 aa21.19■□□□□ 0.98
SCARB1-201ENST00000261693 TMCO5BA8MYB1 307 aa21.18■□□□□ 0.98
SCARB1-201ENST00000261693 GTF2A1P52655 376 aaPredicted RBP21.18■□□□□ 0.98
SCARB1-201ENST00000261693 TCERG1LQ5VWI1 586 aa21.18■□□□□ 0.98
SCARB1-201ENST00000261693 ARMCX3Q9UH62 379 aaPredicted RBP21.18■□□□□ 0.98
SCARB1-201ENST00000261693 SERPINB13Q9UIV8 391 aa21.18■□□□□ 0.98
SCARB1-201ENST00000261693 ATF5Q9Y2D1 282 aaPredicted RBP21.18■□□□□ 0.98
SCARB1-201ENST00000261693 AHDC1Q5TGY3 1603 aaPredicted RBP21.18■□□□□ 0.98
SCARB1-201ENST00000261693 ATAD5Q96QE3 1844 aa21.18■□□□□ 0.98
SCARB1-201ENST00000261693 ALKBH5Q6P6C2 394 aaKnown RBP21.18■□□□□ 0.98
SCARB1-201ENST00000261693 DDX47Q9H0S4 455 aaKnown RBP21.18■□□□□ 0.98
SCARB1-201ENST00000261693 DHX36Q9H2U1 1008 aaKnown RBP21.18■□□□□ 0.98
SCARB1-201ENST00000261693 NAGPAQ9UK23 515 aa21.18■□□□□ 0.98
SCARB1-201ENST00000261693 RIMBP2O15034 1052 aa21.17■□□□□ 0.98
SCARB1-201ENST00000261693 PON1P27169 355 aa21.17■□□□□ 0.98
SCARB1-201ENST00000261693 ECHS1P30084 290 aa21.17■□□□□ 0.98
SCARB1-201ENST00000261693 USP11P51784 963 aa21.17■□□□□ 0.98
SCARB1-201ENST00000261693 EXOC3L4Q17RC7 722 aa21.17■□□□□ 0.98
SCARB1-201ENST00000261693 DPY19L2P1Q6NXN4 242 aa21.17■□□□□ 0.98
SCARB1-201ENST00000261693 GJB7Q6PEY0 223 aa21.17■□□□□ 0.98
SCARB1-201ENST00000261693 CATSPER3Q86XQ3 398 aa21.17■□□□□ 0.98
SCARB1-201ENST00000261693 CD302Q8IX05 232 aa21.17■□□□□ 0.98
SCARB1-201ENST00000261693 EPN3Q9H201 632 aa21.17■□□□□ 0.98
SCARB1-201ENST00000261693 AJAP1Q9UKB5 411 aaPredicted RBP21.17■□□□□ 0.98
SCARB1-201ENST00000261693 A6NNZ2 444 aa21.17■□□□□ 0.98
SCARB1-201ENST00000261693 MYBP10242 640 aa21.17■□□□□ 0.98
SCARB1-201ENST00000261693 HOXD13P35453 343 aa21.17■□□□□ 0.98
SCARB1-201ENST00000261693 HSD17B3P37058 310 aa21.17■□□□□ 0.98
SCARB1-201ENST00000261693 HSPA9P38646 679 aaKnown RBP21.17■□□□□ 0.98
SCARB1-201ENST00000261693 EDRF1Q3B7T1 1238 aa21.17■□□□□ 0.98
SCARB1-201ENST00000261693 TUBB8Q3ZCM7 444 aa21.17■□□□□ 0.98
SCARB1-201ENST00000261693 NAA35Q5VZE5 725 aa21.17■□□□□ 0.98
SCARB1-201ENST00000261693 SFR1Q86XK3 245 aa21.17■□□□□ 0.98
SCARB1-201ENST00000261693 TBC1D16Q8TBP0 767 aa21.17■□□□□ 0.98
SCARB1-201ENST00000261693 MXD3Q9BW11 206 aa21.17■□□□□ 0.98
SCARB1-201ENST00000261693 ISCUQ9H1K1 167 aa21.17■□□□□ 0.98
SCARB1-201ENST00000261693 PPP1R37O75864 691 aa21.16■□□□□ 0.98
SCARB1-201ENST00000261693 AFPP02771 609 aaKnown RBP21.16■□□□□ 0.98
SCARB1-201ENST00000261693 PRR16Q569H4 304 aa21.16■□□□□ 0.98
SCARB1-201ENST00000261693 B4GALNT4Q76KP1 1039 aa21.16■□□□□ 0.98
SCARB1-201ENST00000261693 LRRC57Q8N9N7 239 aa21.16■□□□□ 0.98
SCARB1-201ENST00000261693 NEUROG2Q9H2A3 272 aa21.16■□□□□ 0.98
SCARB1-201ENST00000261693 KCNMB3Q9NPA1 279 aa21.16■□□□□ 0.98
SCARB1-201ENST00000261693 PCDHA1Q9Y5I3 950 aa21.16■□□□□ 0.98
SCARB1-201ENST00000261693 AKAP3O75969 853 aa21.16■□□□□ 0.98
SCARB1-201ENST00000261693 ITGA4P13612 1032 aa21.16■□□□□ 0.98
SCARB1-201ENST00000261693 SHMT1P34896 483 aa21.16■□□□□ 0.98
SCARB1-201ENST00000261693 SNAP25P60880 206 aa21.16■□□□□ 0.98
SCARB1-201ENST00000261693 ITGB3BPQ13352 177 aaPredicted RBP21.16■□□□□ 0.98
SCARB1-201ENST00000261693 GIT2Q14161 759 aa21.16■□□□□ 0.98
SCARB1-201ENST00000261693 PTGISQ16647 500 aa21.16■□□□□ 0.98
SCARB1-201ENST00000261693 QRICH1Q2TAL8 776 aa21.16■□□□□ 0.98
SCARB1-201ENST00000261693 ZC3H3Q8IXZ2 948 aaKnown RBP21.16■□□□□ 0.98
SCARB1-201ENST00000261693 METTL13Q8N6R0 699 aa21.16■□□□□ 0.98
SCARB1-201ENST00000261693 TBC1D22AQ8WUA7 517 aa21.16■□□□□ 0.98
SCARB1-201ENST00000261693 REEP2Q9BRK0 252 aa21.16■□□□□ 0.98
SCARB1-201ENST00000261693 ANO3Q9BYT9 981 aa21.16■□□□□ 0.98
SCARB1-201ENST00000261693 RSPH10B2B2RC85 870 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms