RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 WDR59Q6PJI9 974 aa19.62■□□□□ 0.73
SSB-201ENST00000260956 ZC3H3Q8IXZ2 948 aaKnown RBP19.62■□□□□ 0.73
SSB-201ENST00000260956 TMOD4Q9NZQ9 345 aa19.62■□□□□ 0.73
SSB-201ENST00000260956 REXO2Q9Y3B8 237 aaKnown RBP19.62■□□□□ 0.73
SSB-201ENST00000260956 E9PMD0 336 aa19.61■□□□□ 0.73
SSB-201ENST00000260956 TLR2O60603 784 aa19.61■□□□□ 0.73
SSB-201ENST00000260956 KRT9P35527 623 aa19.61■□□□□ 0.73
SSB-201ENST00000260956 STAT2P52630 851 aa19.61■□□□□ 0.73
SSB-201ENST00000260956 FIGNQ5HY92 759 aa19.61■□□□□ 0.73
SSB-201ENST00000260956 FAM83BQ5T0W9 1011 aa19.61■□□□□ 0.73
SSB-201ENST00000260956 ZNF296Q8WUU4 475 aaPredicted RBP19.61■□□□□ 0.73
SSB-201ENST00000260956 FGFBP2Q9BYJ0 223 aa19.61■□□□□ 0.73
SSB-201ENST00000260956 CPA4Q9UI42 421 aa19.61■□□□□ 0.73
SSB-201ENST00000260956 PLA2G4BP0C869 781 aa19.6■□□□□ 0.73
SSB-201ENST00000260956 ARSHQ5FYA8 562 aa19.6■□□□□ 0.73
SSB-201ENST00000260956 CYP26C1Q6V0L0 522 aa19.6■□□□□ 0.73
SSB-201ENST00000260956 FAM20AQ96MK3 541 aa19.6■□□□□ 0.73
SSB-201ENST00000260956 ZFYVE28Q9HCC9 887 aa19.6■□□□□ 0.73
SSB-201ENST00000260956 GOPCQ9HD26 462 aa19.6■□□□□ 0.73
SSB-201ENST00000260956 MAGEC2Q9UBF1 373 aaPredicted RBP19.6■□□□□ 0.73
SSB-201ENST00000260956 SIK3Q9Y2K2 1263 aa19.6■□□□□ 0.73
SSB-201ENST00000260956 SLC45A1Q9Y2W3 748 aa19.6■□□□□ 0.73
SSB-201ENST00000260956 PARP14Q460N5 1801 aa19.6■□□□□ 0.73
SSB-201ENST00000260956 MSH4O15457 936 aa19.59■□□□□ 0.73
SSB-201ENST00000260956 TPM1P09493 284 aa19.59■□□□□ 0.73
SSB-201ENST00000260956 USP14P54578 494 aa19.59■□□□□ 0.73
SSB-201ENST00000260956 PRR16Q569H4 304 aa19.59■□□□□ 0.73
SSB-201ENST00000260956 C17orf99Q6UX52 265 aa19.59■□□□□ 0.73
SSB-201ENST00000260956 RPAP3Q9H6T3 665 aaPredicted RBP19.59■□□□□ 0.73
SSB-201ENST00000260956 KIAA1024Q9UPX6 916 aa19.59■□□□□ 0.73
SSB-201ENST00000260956 CASP8AP2Q9UKL3 1982 aa19.59■□□□□ 0.73
SSB-201ENST00000260956 POTEFA5A3E0 1075 aa19.59■□□□□ 0.73
SSB-201ENST00000260956 TADA3O75528 432 aa19.59■□□□□ 0.73
SSB-201ENST00000260956 RPA1P27694 616 aa19.59■□□□□ 0.73
SSB-201ENST00000260956 HOXA13P31271 388 aaPredicted RBP19.59■□□□□ 0.73
SSB-201ENST00000260956 KLK7P49862 253 aa19.59■□□□□ 0.73
SSB-201ENST00000260956 FAM26FQ5R3K3 315 aa19.59■□□□□ 0.73
SSB-201ENST00000260956 POTEGQ6S5H5 508 aa19.59■□□□□ 0.73
SSB-201ENST00000260956 CATSPERGQ6ZRH7 1159 aa19.59■□□□□ 0.73
SSB-201ENST00000260956 CATSPER3Q86XQ3 398 aa19.59■□□□□ 0.73
SSB-201ENST00000260956 RETREG2Q8NC44 543 aa19.59■□□□□ 0.73
SSB-201ENST00000260956 ACRBPQ8NEB7 543 aa19.59■□□□□ 0.73
SSB-201ENST00000260956 OR8K1Q8NGG5 319 aa19.59■□□□□ 0.73
SSB-201ENST00000260956 EEF2KMTQ96G04 330 aa19.59■□□□□ 0.73
SSB-201ENST00000260956 CHP1Q99653 195 aa19.59■□□□□ 0.73
SSB-201ENST00000260956 A0A1W2PQJ5 194 aa19.58■□□□□ 0.72
SSB-201ENST00000260956 SPDYE3A6NKU9 549 aa19.58■□□□□ 0.72
SSB-201ENST00000260956 GNG11P61952 73 aa19.58■□□□□ 0.72
SSB-201ENST00000260956 IRX2Q9BZI1 471 aaPredicted RBP19.58■□□□□ 0.72
SSB-201ENST00000260956 BCRP11274 1271 aa19.57■□□□□ 0.72
SSB-201ENST00000260956 CTGFP29279 349 aa19.57■□□□□ 0.72
SSB-201ENST00000260956 IKQ13123 557 aaPredicted RBP19.57■□□□□ 0.72
SSB-201ENST00000260956 ELF2Q15723 593 aa19.57■□□□□ 0.72
SSB-201ENST00000260956 COL13A1Q5TAT6 717 aaPredicted RBP19.57■□□□□ 0.72
SSB-201ENST00000260956 GPBP1Q86WP2 473 aa19.57■□□□□ 0.72
SSB-201ENST00000260956 PDCL2Q8N4E4 241 aa19.57■□□□□ 0.72
SSB-201ENST00000260956 CYP2W1Q8TAV3 490 aa19.57■□□□□ 0.72
SSB-201ENST00000260956 UIMC1Q96RL1 719 aa19.57■□□□□ 0.72
SSB-201ENST00000260956 PARK7Q99497 189 aaKnown RBP19.57■□□□□ 0.72
SSB-201ENST00000260956 KCTD10Q9H3F6 313 aa19.57■□□□□ 0.72
SSB-201ENST00000260956 TXNRD2Q9NNW7 524 aa19.57■□□□□ 0.72
SSB-201ENST00000260956 PANK4Q9NVE7 773 aa19.57■□□□□ 0.72
SSB-201ENST00000260956 FBXO28Q9NVF7 368 aa19.57■□□□□ 0.72
SSB-201ENST00000260956 MRFAP1Q9Y605 127 aa19.57■□□□□ 0.72
SSB-201ENST00000260956 ECM2O94769 699 aaPredicted RBP19.56■□□□□ 0.72
SSB-201ENST00000260956 PRKCSHP14314 528 aaPredicted RBP19.56■□□□□ 0.72
SSB-201ENST00000260956 IDEP14735 1019 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 HNRNPH3P31942 346 aaKnown RBP19.56■□□□□ 0.72
SSB-201ENST00000260956 TRAF1Q13077 416 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 LRRC41Q15345 812 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 MAN2A1Q16706 1144 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 HAUS3Q68CZ6 603 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 MYOCDQ8IZQ8 938 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 TBC1D5Q92609 795 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 ARHGAP39Q9C0H5 1083 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 LUC7L2Q9Y383 392 aaKnown RBP19.56■□□□□ 0.72
SSB-201ENST00000260956 NPHP3-ACAD11A0A0J9YXS1 232 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 ABL1P00519 1130 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 MTIF2P46199 727 aaKnown RBP19.56■□□□□ 0.72
SSB-201ENST00000260956 PSMC6P62333 389 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 HERVK_113P62684 666 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 CDK17Q00537 523 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 GHRHRQ02643 423 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 VWA3BQ502W6 1294 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 FAM160B2Q86V87 743 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 ANKRD13CQ8N6S4 541 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 SYT2Q8N9I0 419 aaPredicted RBP19.56■□□□□ 0.72
SSB-201ENST00000260956 LPAR1Q92633 364 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 POLR3CQ9BUI4 534 aaPredicted RBP19.56■□□□□ 0.72
SSB-201ENST00000260956 NOC4LQ9BVI4 516 aaKnown RBP19.56■□□□□ 0.72
SSB-201ENST00000260956 NUP58Q9BVL2 599 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 SH2D4AQ9H788 454 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 AGPAT5Q9NUQ2 364 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 RBPJLQ9UBG7 517 aa19.56■□□□□ 0.72
SSB-201ENST00000260956 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.56■□□□□ 0.72
SSB-201ENST00000260956 V9GYY5 206 aaPredicted RBP19.56■□□□□ 0.72
SSB-201ENST00000260956 ZNF536O15090 1300 aa19.55■□□□□ 0.72
SSB-201ENST00000260956 EML1O00423 815 aa19.55■□□□□ 0.72
SSB-201ENST00000260956 MARCH6O60337 910 aa19.55■□□□□ 0.72
SSB-201ENST00000260956 MARSP56192 900 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms