RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 MYL1P05976 194 aa19.52■□□□□ 0.72
SRSF1-201ENST00000258962 ARP10275 920 aa19.52■□□□□ 0.72
SRSF1-201ENST00000258962 ITGB5P18084 799 aa19.52■□□□□ 0.72
SRSF1-201ENST00000258962 ALDH5A1P51649 535 aaPredicted RBP19.52■□□□□ 0.72
SRSF1-201ENST00000258962 SETQ01105 290 aaPredicted RBP19.52■□□□□ 0.72
SRSF1-201ENST00000258962 PCNX4Q63HM2 1172 aa19.52■□□□□ 0.72
SRSF1-201ENST00000258962 ARRDC4Q8NCT1 418 aa19.52■□□□□ 0.72
SRSF1-201ENST00000258962 CDK5RAP3Q96JB5 506 aa19.52■□□□□ 0.72
SRSF1-201ENST00000258962 IKBKBO14920 756 aa19.51■□□□□ 0.71
SRSF1-201ENST00000258962 SLC26A4O43511 780 aa19.51■□□□□ 0.71
SRSF1-201ENST00000258962 KLRC4O43908 158 aa19.51■□□□□ 0.71
SRSF1-201ENST00000258962 PSMD10O75832 226 aa19.51■□□□□ 0.71
SRSF1-201ENST00000258962 MYCNP04198 464 aaPredicted RBP19.51■□□□□ 0.71
SRSF1-201ENST00000258962 CCT6AP40227 531 aaKnown RBP19.51■□□□□ 0.71
SRSF1-201ENST00000258962 MRPS9P82933 396 aaKnown RBP19.51■□□□□ 0.71
SRSF1-201ENST00000258962 PDE4DQ08499 809 aa19.51■□□□□ 0.71
SRSF1-201ENST00000258962 NCAPH2Q6IBW4 605 aa19.51■□□□□ 0.71
SRSF1-201ENST00000258962 NECAB2Q7Z6G3 386 aa19.51■□□□□ 0.71
SRSF1-201ENST00000258962 RAD54LQ92698 747 aa19.51■□□□□ 0.71
SRSF1-201ENST00000258962 TRIM44Q96DX7 344 aaPredicted RBP19.51■□□□□ 0.71
SRSF1-201ENST00000258962 PAWRQ96IZ0 340 aaKnown RBP19.51■□□□□ 0.71
SRSF1-201ENST00000258962 PXMP2Q9NR77 195 aa19.51■□□□□ 0.71
SRSF1-201ENST00000258962 UBIAD1Q9Y5Z9 338 aa19.51■□□□□ 0.71
SRSF1-201ENST00000258962 ASTN1O14525 1302 aa19.51■□□□□ 0.71
SRSF1-201ENST00000258962 KDM3AQ9Y4C1 1321 aa19.51■□□□□ 0.71
SRSF1-201ENST00000258962 MED24O75448 989 aa19.51■□□□□ 0.71
SRSF1-201ENST00000258962 EIF2AK2P19525 551 aaKnown RBP19.51■□□□□ 0.71
SRSF1-201ENST00000258962 PLCB2Q00722 1185 aa19.51■□□□□ 0.71
SRSF1-201ENST00000258962 MCM6Q14566 821 aa19.51■□□□□ 0.71
SRSF1-201ENST00000258962 PGM5Q15124 567 aa19.51■□□□□ 0.71
SRSF1-201ENST00000258962 CCDC144BQ3MJ40 725 aa19.51■□□□□ 0.71
SRSF1-201ENST00000258962 NIPA1Q7RTP0 329 aa19.51■□□□□ 0.71
SRSF1-201ENST00000258962 NSUN6Q8TEA1 469 aaKnown RBP19.51■□□□□ 0.71
SRSF1-201ENST00000258962 RMDN3Q96TC7 470 aa19.51■□□□□ 0.71
SRSF1-201ENST00000258962 PDCD2LQ9BRP1 358 aa19.51■□□□□ 0.71
SRSF1-201ENST00000258962 KIAA1217Q5T5P2 1943 aa19.5■□□□□ 0.71
SRSF1-201ENST00000258962 POTEB3A0JP26 581 aa19.5■□□□□ 0.71
SRSF1-201ENST00000258962 CD44P16070 742 aaKnown RBP19.5■□□□□ 0.71
SRSF1-201ENST00000258962 LRCH2Q5VUJ6 765 aa19.5■□□□□ 0.71
SRSF1-201ENST00000258962 POTEBQ6S5H4 581 aa19.5■□□□□ 0.71
SRSF1-201ENST00000258962 EEPD1Q7L9B9 569 aa19.5■□□□□ 0.71
SRSF1-201ENST00000258962 MORC4Q8TE76 937 aa19.5■□□□□ 0.71
SRSF1-201ENST00000258962 LARP4BQ92615 738 aaKnown RBP19.5■□□□□ 0.71
SRSF1-201ENST00000258962 C7orf25Q9BPX7 421 aa19.5■□□□□ 0.71
SRSF1-201ENST00000258962 HTATIP2Q9BUP3 242 aa19.5■□□□□ 0.71
SRSF1-201ENST00000258962 TRIM9Q9C026 710 aa19.5■□□□□ 0.71
SRSF1-201ENST00000258962 HSD3B7Q9H2F3 369 aa19.5■□□□□ 0.71
SRSF1-201ENST00000258962 VTA1Q9NP79 307 aa19.5■□□□□ 0.71
SRSF1-201ENST00000258962 XPNPEP3Q9NQH7 507 aa19.5■□□□□ 0.71
SRSF1-201ENST00000258962 DACH1Q9UI36 760 aa19.5■□□□□ 0.71
SRSF1-201ENST00000258962 EML1O00423 815 aa19.49■□□□□ 0.71
SRSF1-201ENST00000258962 MYL5Q02045 173 aa19.49■□□□□ 0.71
SRSF1-201ENST00000258962 KCNB1Q14721 858 aa19.49■□□□□ 0.71
SRSF1-201ENST00000258962 ARHGEF16Q5VV41 709 aa19.49■□□□□ 0.71
SRSF1-201ENST00000258962 SARM1Q6SZW1 724 aa19.49■□□□□ 0.71
SRSF1-201ENST00000258962 UBE2Q1Q7Z7E8 422 aa19.49■□□□□ 0.71
SRSF1-201ENST00000258962 SMYD4Q8IYR2 804 aaPredicted RBP19.49■□□□□ 0.71
SRSF1-201ENST00000258962 MED15Q96RN5 788 aa19.49■□□□□ 0.71
SRSF1-201ENST00000258962 ZNF577Q9BSK1 485 aa19.49■□□□□ 0.71
SRSF1-201ENST00000258962 NT5C3AQ9H0P0 336 aa19.49■□□□□ 0.71
SRSF1-201ENST00000258962 RMND1Q9NWS8 449 aa19.49■□□□□ 0.71
SRSF1-201ENST00000258962 MCM3APO60318 1980 aa19.48■□□□□ 0.71
SRSF1-201ENST00000258962 SMTNL1A8MU46 457 aa19.48■□□□□ 0.71
SRSF1-201ENST00000258962 PPP1R3GB7ZBB8 358 aa19.48■□□□□ 0.71
SRSF1-201ENST00000258962 KBTBD13C9JR72 458 aa19.48■□□□□ 0.71
SRSF1-201ENST00000258962 SPATA31C1P0DKV0 1188 aa19.48■□□□□ 0.71
SRSF1-201ENST00000258962 PPP2R5CQ13362 524 aa19.48■□□□□ 0.71
SRSF1-201ENST00000258962 DHX8Q14562 1220 aaKnown RBP19.48■□□□□ 0.71
SRSF1-201ENST00000258962 KMT5BQ4FZB7 885 aa19.48■□□□□ 0.71
SRSF1-201ENST00000258962 HAUS3Q68CZ6 603 aa19.48■□□□□ 0.71
SRSF1-201ENST00000258962 B3GNT9Q6UX72 402 aa19.48■□□□□ 0.71
SRSF1-201ENST00000258962 SV2BQ7L1I2 683 aa19.48■□□□□ 0.71
SRSF1-201ENST00000258962 CATSPER3Q86XQ3 398 aa19.48■□□□□ 0.71
SRSF1-201ENST00000258962 FBXO16Q8IX29 292 aaPredicted RBP19.48■□□□□ 0.71
SRSF1-201ENST00000258962 DIS3LQ8TF46 1054 aaKnown RBP19.48■□□□□ 0.71
SRSF1-201ENST00000258962 IWS1Q96ST2 819 aa19.48■□□□□ 0.71
SRSF1-201ENST00000258962 WDR11Q9BZH6 1224 aa19.48■□□□□ 0.71
SRSF1-201ENST00000258962 KATNBL1Q9H079 304 aa19.48■□□□□ 0.71
SRSF1-201ENST00000258962 C11orf49Q9H6J7 331 aa19.48■□□□□ 0.71
SRSF1-201ENST00000258962 SPC25Q9HBM1 224 aa19.48■□□□□ 0.71
SRSF1-201ENST00000258962 JADE2Q9NQC1 790 aa19.48■□□□□ 0.71
SRSF1-201ENST00000258962 MYMKA6NI61 221 aa19.47■□□□□ 0.71
SRSF1-201ENST00000258962 DUSP11O75319 330 aaKnown RBP19.47■□□□□ 0.71
SRSF1-201ENST00000258962 RPA1P27694 616 aa19.47■□□□□ 0.71
SRSF1-201ENST00000258962 TNFAIP2Q03169 654 aa19.47■□□□□ 0.71
SRSF1-201ENST00000258962 GJC2Q5T442 439 aaPredicted RBP19.47■□□□□ 0.71
SRSF1-201ENST00000258962 ZNF658Q5TYW1 1059 aaPredicted RBP19.47■□□□□ 0.71
SRSF1-201ENST00000258962 IQSEC1Q6DN90 963 aa19.47■□□□□ 0.71
SRSF1-201ENST00000258962 RNF180Q86T96 592 aa19.47■□□□□ 0.71
SRSF1-201ENST00000258962 ERMNQ8TAM6 284 aa19.47■□□□□ 0.71
SRSF1-201ENST00000258962 KCNH7Q9NS40 1196 aa19.47■□□□□ 0.71
SRSF1-201ENST00000258962 KIAA1024Q9UPX6 916 aa19.47■□□□□ 0.71
SRSF1-201ENST00000258962 LRRC37A2A6NM11 1700 aa19.47■□□□□ 0.71
SRSF1-201ENST00000258962 E9PMD0 336 aa19.46■□□□□ 0.71
SRSF1-201ENST00000258962 IPO5O00410 1097 aaKnown RBP19.46■□□□□ 0.71
SRSF1-201ENST00000258962 DNM1LO00429 736 aa19.46■□□□□ 0.71
SRSF1-201ENST00000258962 GAS7O60861 476 aa19.46■□□□□ 0.71
SRSF1-201ENST00000258962 RHOBTB3O94955 611 aa19.46■□□□□ 0.71
SRSF1-201ENST00000258962 MYCLP12524 364 aaPredicted RBP19.46■□□□□ 0.71
SRSF1-201ENST00000258962 ZNF75DP51815 510 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms