RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 RIMS1Q86UR5 1692 aaKnown RBP8.39□□□□□ -1.07
GPNMB-201ENST00000258733 VPS37CA5D8V6 355 aaPredicted RBP8.39□□□□□ -1.07
GPNMB-201ENST00000258733 NVLO15381 856 aaKnown RBP8.39□□□□□ -1.07
GPNMB-201ENST00000258733 ATP9AO75110 1047 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 EPN2O95208 641 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 ASLP04424 464 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 UBA7P41226 1012 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 CBX5P45973 191 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 PPP2R2AP63151 447 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 EXOSC9Q06265 439 aaKnown RBP8.39□□□□□ -1.07
GPNMB-201ENST00000258733 MAP3K12Q12852 859 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 CYTH1Q15438 398 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 MTERF2Q49AM1 385 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 HIBCHQ6NVY1 386 aaPredicted RBP8.39□□□□□ -1.07
GPNMB-201ENST00000258733 CATSPER4Q7RTX7 472 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 CLVS1Q8IUQ0 354 aaPredicted RBP8.39□□□□□ -1.07
GPNMB-201ENST00000258733 CCDC83Q8IWF9 413 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 SLC38A6Q8IZM9 456 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 CRACR2BQ8N4Y2 399 aaPredicted RBP8.39□□□□□ -1.07
GPNMB-201ENST00000258733 OR7G1Q8NGA0 311 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 PTPRN2Q92932 1015 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 RBM18Q96H35 190 aaKnown RBP8.39□□□□□ -1.07
GPNMB-201ENST00000258733 ANKRD36BP1Q96IX9 119 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 NLRP3Q96P20 1036 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 SETDB2Q96T68 719 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 BCL2L13Q9BXK5 485 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 C12orf10Q9HB07 376 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 GDPD2Q9HCC8 539 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 SH3GLB2Q9NR46 395 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 DLGAP2Q9P1A6 1054 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 PPP2R3BQ9Y5P8 575 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 TRPM1Q7Z4N2 1603 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 DNM1LO00429 736 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 IFRD1O00458 451 aaPredicted RBP8.39□□□□□ -1.07
GPNMB-201ENST00000258733 EXTL3O43909 919 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 ZNF16P17020 682 aaPredicted RBP8.39□□□□□ -1.07
GPNMB-201ENST00000258733 NAGAP17050 411 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 KCNJ6P48051 423 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 TRIM28Q13263 835 aaKnown RBP8.39□□□□□ -1.07
GPNMB-201ENST00000258733 PDE3AQ14432 1141 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 MYLK3Q32MK0 819 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 ANKRD20A8PQ5CZ79 823 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 SH3D19Q5HYK7 790 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 PHLDB3Q6NSJ2 640 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 C16orf54Q6UWD8 224 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 BTN2A1Q7KYR7 527 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 METTL3Q86U44 580 aaKnown RBP8.39□□□□□ -1.07
GPNMB-201ENST00000258733 DZIP1LQ8IYY4 767 aaKnown RBP8.39□□□□□ -1.07
GPNMB-201ENST00000258733 HAPLN3Q96S86 360 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 NUF2Q9BZD4 464 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 API5Q9BZZ5 524 aaKnown RBP8.39□□□□□ -1.07
GPNMB-201ENST00000258733 DNAJC25Q9H1X3 360 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 DCTPP1Q9H773 170 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 ANKZF1Q9H8Y5 726 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 FARSBQ9NSD9 589 aaKnown RBP8.39□□□□□ -1.07
GPNMB-201ENST00000258733 CCDC87Q9NVE4 849 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 SAP30BPQ9UHR5 308 aaKnown RBP8.39□□□□□ -1.07
GPNMB-201ENST00000258733 DDX19BQ9UMR2 479 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 SNX9Q9Y5X1 595 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 EMILIN1Q9Y6C2 1016 aa8.39□□□□□ -1.07
GPNMB-201ENST00000258733 MYBBP1AQ9BQG0 1328 aaKnown RBP8.39□□□□□ -1.07
GPNMB-201ENST00000258733 GOLGA8KD6RF30 607 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 YKT6O15498 198 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 SCTRP47872 440 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 SCNN1DP51172 638 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 PRKCEQ02156 737 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 SF3B3Q15393 1217 aaKnown RBP8.38□□□□□ -1.07
GPNMB-201ENST00000258733 CTC1Q2NKJ3 1217 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 NDUFAF5Q5TEU4 345 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 IL23RQ5VWK5 629 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 GATAD2AQ86YP4 633 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 HACE1Q8IYU2 909 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 NATD1Q8N6N6 113 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 ARL8AQ96BM9 186 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 INTS12Q96CB8 462 aaKnown RBP8.38□□□□□ -1.07
GPNMB-201ENST00000258733 TTC1Q99614 292 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 SH3GL2Q99962 352 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 CALN1Q9BXU9 219 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 KRT23Q9C075 422 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 TUT1Q9H6E5 874 aaKnown RBP8.38□□□□□ -1.07
GPNMB-201ENST00000258733 SEPT11Q9NVA2 429 aaKnown RBP8.38□□□□□ -1.07
GPNMB-201ENST00000258733 USH1CQ9Y6N9 552 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 PLXNC1O60486 1568 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 ANKRD34BA5PLL1 514 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 OR5K4A6NMS3 321 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 TBX3O15119 743 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 ORC4O43929 436 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 LILRB3O75022 631 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 CBFA2T3O75081 653 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 TRPA1O75762 1119 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 OR5F1O95221 314 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 CCND1P24385 295 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 TRAPPC10P48553 1259 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 ACADVLP49748 655 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 NLRP6P59044 892 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 SPIDRQ14159 915 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 SPCS2Q15005 226 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 KRT71Q3SY84 523 aa8.38□□□□□ -1.07
GPNMB-201ENST00000258733 FASTKD5Q7L8L6 764 aaKnown RBP8.38□□□□□ -1.07
GPNMB-201ENST00000258733 SLC51BQ86UW2 128 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms