RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 TCHPQ9BT92 498 aa10.02□□□□□ -0.81
CKAP2-201ENST00000258607 NFKBIEO00221 500 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 KCNH2Q12809 1159 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 FSTL1Q12841 308 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 ARSHQ5FYA8 562 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 NT5DC1Q5TFE4 455 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 HAUS3Q68CZ6 603 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 STYK1Q6J9G0 422 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 ANKRD35Q8N283 1001 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 SCFD1Q8WVM8 642 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 FAM151AQ8WW52 585 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 RIN2Q8WYP3 895 aaPredicted RBP10.01□□□□□ -0.81
CKAP2-201ENST00000258607 VCPKMTQ9H867 229 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 KCNH7Q9NS40 1196 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 RNF181Q9P0P0 153 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 ANKFY1Q9P2R3 1169 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 CAPN6Q9Y6Q1 641 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 MYH1P12882 1939 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 ZNF541Q9H0D2 1346 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 MYCP01106 439 aaPredicted RBP10.01□□□□□ -0.81
CKAP2-201ENST00000258607 ASNSP08243 561 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 DNM2P50570 870 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 KLHL30Q0D2K2 578 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 VWA3BQ502W6 1294 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 TAB3Q8N5C8 712 aaPredicted RBP10.01□□□□□ -0.81
CKAP2-201ENST00000258607 UNC45AQ9H3U1 944 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 ELP3Q9H9T3 547 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 NYAP2Q9P242 653 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 MYO1AQ9UBC5 1043 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 ARMCX3Q9UH62 379 aaPredicted RBP10.01□□□□□ -0.81
CKAP2-201ENST00000258607 ANKRD65E5RJM6 399 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 KCNA3P22001 575 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 KIAA0753Q2KHM9 967 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 GALNT17Q6IS24 598 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 TRIM50Q86XT4 487 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 TMEM130Q8N3G9 435 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 SUPT20HQ8NEM7 779 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 SPATA20Q8TB22 786 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 CLMNQ96JQ2 1002 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 PARD6BQ9BYG5 372 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 ZMYND15Q9H091 742 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 PLCB1Q9NQ66 1216 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 RNF146Q9NTX7 359 aa10.01□□□□□ -0.81
CKAP2-201ENST00000258607 PDS5AQ29RF7 1337 aaKnown RBP10□□□□□ -0.81
CKAP2-201ENST00000258607 ATMINO43313 823 aaPredicted RBP10□□□□□ -0.81
CKAP2-201ENST00000258607 ITGB5P18084 799 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 VCAM1P19320 739 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 GTF2F1P35269 517 aaKnown RBP eCLIP10□□□□□ -0.81
CKAP2-201ENST00000258607 KIF11P52732 1056 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 MTMR1Q13613 665 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 CEP55Q53EZ4 464 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 UHMK1Q8TAS1 419 aaKnown RBP10□□□□□ -0.81
CKAP2-201ENST00000258607 U2AF1L4Q8WU68 220 aaKnown RBP10□□□□□ -0.81
CKAP2-201ENST00000258607 ERO1AQ96HE7 468 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 PI4K2AQ9BTU6 479 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 COL4A3BPQ9Y5P4 624 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 FAM237AA0A1B0GTK4 181 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 AKAP3O75969 853 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 XRCC5P13010 732 aaKnown RBP10□□□□□ -0.81
CKAP2-201ENST00000258607 FKBP3Q00688 224 aaKnown RBP10□□□□□ -0.81
CKAP2-201ENST00000258607 ZNF394Q53GI3 561 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 WDR59Q6PJI9 974 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 C7orf43Q8WVR3 580 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 ANKS1AQ92625 1134 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 AK8Q96MA6 479 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 NAPGQ99747 312 aaPredicted RBP10□□□□□ -0.81
CKAP2-201ENST00000258607 TOPORSQ9NS56 1045 aaPredicted RBP10□□□□□ -0.81
CKAP2-201ENST00000258607 GCNT4Q9P109 453 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 SEPT9Q9UHD8 586 aaPredicted RBP10□□□□□ -0.81
CKAP2-201ENST00000258607 FHOD1Q9Y613 1164 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 PRRC2BQ5JSZ5 2229 aaKnown RBP10□□□□□ -0.81
CKAP2-201ENST00000258607 CCDC88AQ3V6T2 1871 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 A0A1B0GUL6 1792 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 ZSCAN5CA6NGD5 496 aaPredicted RBP10□□□□□ -0.81
CKAP2-201ENST00000258607 CYLC1P35663 651 aaPredicted RBP10□□□□□ -0.81
CKAP2-201ENST00000258607 UGCGQ16739 394 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 SWSAP1Q6NVH7 229 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 RNF207Q6ZRF8 634 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 TMTC1Q8IUR5 882 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 PPM1KQ8N3J5 372 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 DCAF4Q8WV16 495 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 TMEM143Q96AN5 459 aa10□□□□□ -0.81
CKAP2-201ENST00000258607 REXO2Q9Y3B8 237 aaKnown RBP10□□□□□ -0.81
CKAP2-201ENST00000258607 LAMB2P55268 1798 aa9.99□□□□□ -0.81
CKAP2-201ENST00000258607 KLRG2A4D1S0 409 aaPredicted RBP9.99□□□□□ -0.81
CKAP2-201ENST00000258607 CTAGE15A4D2H0 777 aa9.99□□□□□ -0.81
CKAP2-201ENST00000258607 CTAGE8P0CG41 777 aa9.99□□□□□ -0.81
CKAP2-201ENST00000258607 SPATA31C1P0DKV0 1188 aa9.99□□□□□ -0.81
CKAP2-201ENST00000258607 C15orf52Q6ZUT6 534 aaKnown RBP9.99□□□□□ -0.81
CKAP2-201ENST00000258607 CTAGE6Q86UF2 777 aa9.99□□□□□ -0.81
CKAP2-201ENST00000258607 CTAGE4Q8IX94 777 aa9.99□□□□□ -0.81
CKAP2-201ENST00000258607 COG1Q8WTW3 980 aa9.99□□□□□ -0.81
CKAP2-201ENST00000258607 DNAJC19Q96DA6 116 aa9.99□□□□□ -0.81
CKAP2-201ENST00000258607 MMS19Q96T76 1030 aa9.99□□□□□ -0.81
CKAP2-201ENST00000258607 IDI2Q9BXS1 227 aa9.99□□□□□ -0.81
CKAP2-201ENST00000258607 ARHGAP20Q9P2F6 1191 aa9.99□□□□□ -0.81
CKAP2-201ENST00000258607 IGKV6D-41A0A0C4DH26 115 aa9.99□□□□□ -0.81
CKAP2-201ENST00000258607 SMIM23A6NLE4 172 aa9.99□□□□□ -0.81
CKAP2-201ENST00000258607 HIP1RO75146 1068 aa9.99□□□□□ -0.81
CKAP2-201ENST00000258607 GUCY2FP51841 1108 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms