RNA–Protein interactions for RNA: ENST00000257818.2

LMO2-201, Transcript of LIM domain only 2, humanhuman

TSL 1 (best) BASIC

Gene LMO2, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-201ENST00000257818 DNAJC19Q96DA6 116 aa27.13■■□□□ 1.93
LMO2-201ENST00000257818 PCDHGC5Q9Y5F6 944 aa27.13■■□□□ 1.93
LMO2-201ENST00000257818 GRID2IPA4D2P6 1211 aa27.12■■□□□ 1.93
LMO2-201ENST00000257818 INPP5BP32019 993 aa27.12■■□□□ 1.93
LMO2-201ENST00000257818 FKBP3Q00688 224 aaKnown RBP27.12■■□□□ 1.93
LMO2-201ENST00000257818 PDIA5Q14554 519 aa27.12■■□□□ 1.93
LMO2-201ENST00000257818 CD302Q8IX05 232 aa27.12■■□□□ 1.93
LMO2-201ENST00000257818 TBC1D5Q92609 795 aa27.12■■□□□ 1.93
LMO2-201ENST00000257818 MRIQ9BWK5 157 aa27.12■■□□□ 1.93
LMO2-201ENST00000257818 MPHOSPH10O00566 681 aaKnown RBP27.11■■□□□ 1.93
LMO2-201ENST00000257818 SMARCA1P28370 1054 aa27.11■■□□□ 1.93
LMO2-201ENST00000257818 COASYQ13057 564 aa27.11■■□□□ 1.93
LMO2-201ENST00000257818 CCDC40Q4G0X9 1142 aa27.11■■□□□ 1.93
LMO2-201ENST00000257818 PACSIN1Q9BY11 444 aa27.11■■□□□ 1.93
LMO2-201ENST00000257818 FGFBP2Q9BYJ0 223 aa27.11■■□□□ 1.93
LMO2-201ENST00000257818 NUCKS1Q9H1E3 243 aaKnown RBP27.11■■□□□ 1.93
LMO2-201ENST00000257818 FAM196BA6NMK8 535 aa27.11■■□□□ 1.93
LMO2-201ENST00000257818 TRAF5O00463 557 aa27.11■■□□□ 1.93
LMO2-201ENST00000257818 PPIP5K2O43314 1243 aa27.11■■□□□ 1.93
LMO2-201ENST00000257818 CLSTN1O94985 981 aa27.11■■□□□ 1.93
LMO2-201ENST00000257818 GUCY1A3Q02108 690 aa27.11■■□□□ 1.93
LMO2-201ENST00000257818 SLC18A3Q16572 532 aa27.11■■□□□ 1.93
LMO2-201ENST00000257818 EMC10Q5UCC4 262 aa27.11■■□□□ 1.93
LMO2-201ENST00000257818 FBXW10Q5XX13 1052 aa27.11■■□□□ 1.93
LMO2-201ENST00000257818 A0A087X0T9 212 aa27.1■■□□□ 1.93
LMO2-201ENST00000257818 ZEB2O60315 1214 aa27.1■■□□□ 1.93
LMO2-201ENST00000257818 FAM228BP0C875 321 aa27.1■■□□□ 1.93
LMO2-201ENST00000257818 LSP1P33241 339 aa27.1■■□□□ 1.93
LMO2-201ENST00000257818 RNASE9P60153 205 aaKnown RBP27.1■■□□□ 1.93
LMO2-201ENST00000257818 KRT79Q5XKE5 535 aa27.1■■□□□ 1.93
LMO2-201ENST00000257818 COA7Q96BR5 231 aa27.1■■□□□ 1.93
LMO2-201ENST00000257818 RIOX1Q9H6W3 641 aa27.1■■□□□ 1.93
LMO2-201ENST00000257818 KANSL2Q9H9L4 492 aa27.1■■□□□ 1.93
LMO2-201ENST00000257818 FAM198AQ9UFP1 575 aa27.1■■□□□ 1.93
LMO2-201ENST00000257818 DDTLA6NHG4 134 aaPredicted RBP27.1■■□□□ 1.93
LMO2-201ENST00000257818 YDJCA8MPS7 323 aa27.1■■□□□ 1.93
LMO2-201ENST00000257818 TTLL1O95922 423 aa27.1■■□□□ 1.93
LMO2-201ENST00000257818 CDC37Q16543 378 aaPredicted RBP27.1■■□□□ 1.93
LMO2-201ENST00000257818 DNAJC18Q9H819 358 aa27.1■■□□□ 1.93
LMO2-201ENST00000257818 ATXN2Q99700 1313 aaKnown RBP27.09■■□□□ 1.93
LMO2-201ENST00000257818 RAB34Q9BZG1 259 aa27.09■■□□□ 1.93
LMO2-201ENST00000257818 RAD51CO43502 376 aa27.09■■□□□ 1.93
LMO2-201ENST00000257818 HDLBPQ00341 1268 aaKnown RBP27.09■■□□□ 1.93
LMO2-201ENST00000257818 KCNV1Q6PIU1 500 aa27.09■■□□□ 1.93
LMO2-201ENST00000257818 B4GALNT4Q76KP1 1039 aa27.09■■□□□ 1.93
LMO2-201ENST00000257818 MYBP10242 640 aa27.08■■□□□ 1.93
LMO2-201ENST00000257818 NR1D1P20393 614 aa27.08■■□□□ 1.93
LMO2-201ENST00000257818 HOXA7P31268 230 aaPredicted RBP27.08■■□□□ 1.93
LMO2-201ENST00000257818 ARID5AQ03989 594 aa27.08■■□□□ 1.93
LMO2-201ENST00000257818 KIAA0753Q2KHM9 967 aa27.08■■□□□ 1.93
LMO2-201ENST00000257818 LRRC27Q9C0I9 530 aa27.08■■□□□ 1.93
LMO2-201ENST00000257818 EPN3Q9H201 632 aa27.08■■□□□ 1.93
LMO2-201ENST00000257818 GPCPD1Q9NPB8 672 aa27.08■■□□□ 1.93
LMO2-201ENST00000257818 LUC7LQ9NQ29 371 aaKnown RBP27.08■■□□□ 1.93
LMO2-201ENST00000257818 SERPINA10Q9UK55 444 aa27.08■■□□□ 1.93
LMO2-201ENST00000257818 MYO3BQ8WXR4 1341 aa27.08■■□□□ 1.93
LMO2-201ENST00000257818 ADCY7P51828 1080 aa27.07■■□□□ 1.92
LMO2-201ENST00000257818 RAPGEF1Q13905 1077 aa27.07■■□□□ 1.92
LMO2-201ENST00000257818 CC2D2BQ6DHV5 1058 aa27.07■■□□□ 1.92
LMO2-201ENST00000257818 SH3BP5LQ7L8J4 393 aa27.07■■□□□ 1.92
LMO2-201ENST00000257818 TRIM59Q8IWR1 403 aa27.07■■□□□ 1.92
LMO2-201ENST00000257818 USP38Q8NB14 1042 aa27.07■■□□□ 1.92
LMO2-201ENST00000257818 WHAMMQ8TF30 809 aa27.07■■□□□ 1.92
LMO2-201ENST00000257818 GJA10Q969M2 543 aa27.07■■□□□ 1.92
LMO2-201ENST00000257818 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.07■■□□□ 1.92
LMO2-201ENST00000257818 TBC1D7Q9P0N9 293 aa27.07■■□□□ 1.92
LMO2-201ENST00000257818 ADAMTS1Q9UHI8 967 aa27.07■■□□□ 1.92
LMO2-201ENST00000257818 HNRNPH1P31943 449 aaKnown RBP27.07■■□□□ 1.92
LMO2-201ENST00000257818 SHROOM1Q2M3G4 852 aaPredicted RBP27.07■■□□□ 1.92
LMO2-201ENST00000257818 FAM26FQ5R3K3 315 aa27.07■■□□□ 1.92
LMO2-201ENST00000257818 ATP6V1G3Q96LB4 118 aa27.07■■□□□ 1.92
LMO2-201ENST00000257818 IDI2Q9BXS1 227 aa27.07■■□□□ 1.92
LMO2-201ENST00000257818 PANK4Q9NVE7 773 aa27.07■■□□□ 1.92
LMO2-201ENST00000257818 TMEM59LQ9UK28 342 aa27.07■■□□□ 1.92
LMO2-201ENST00000257818 NAA35Q5VZE5 725 aa27.06■■□□□ 1.92
LMO2-201ENST00000257818 FAM133AQ8N9E0 248 aa27.06■■□□□ 1.92
LMO2-201ENST00000257818 SUPT20HQ8NEM7 779 aa27.06■■□□□ 1.92
LMO2-201ENST00000257818 TDRD3Q9H7E2 651 aaKnown RBP27.06■■□□□ 1.92
LMO2-201ENST00000257818 SIPA1L1O43166 1804 aa27.06■■□□□ 1.92
LMO2-201ENST00000257818 SNHG28P0DPA3 235 aa27.06■■□□□ 1.92
LMO2-201ENST00000257818 BAG6P46379 1132 aa27.06■■□□□ 1.92
LMO2-201ENST00000257818 ENOX2Q16206 610 aaKnown RBP27.06■■□□□ 1.92
LMO2-201ENST00000257818 TTLL6Q8N841 843 aa27.06■■□□□ 1.92
LMO2-201ENST00000257818 CEP63Q96MT8 703 aa27.06■■□□□ 1.92
LMO2-201ENST00000257818 AIPL1Q9NZN9 384 aa27.06■■□□□ 1.92
LMO2-201ENST00000257818 HSPA9P38646 679 aaKnown RBP27.05■■□□□ 1.92
LMO2-201ENST00000257818 FNTAP49354 379 aa27.05■■□□□ 1.92
LMO2-201ENST00000257818 PTGISQ16647 500 aa27.05■■□□□ 1.92
LMO2-201ENST00000257818 ASPRV1Q53RT3 343 aa27.05■■□□□ 1.92
LMO2-201ENST00000257818 KLHL7Q8IXQ5 586 aa27.05■■□□□ 1.92
LMO2-201ENST00000257818 C1orf131Q8NDD1 294 aaKnown RBP27.05■■□□□ 1.92
LMO2-201ENST00000257818 HAS1Q92839 578 aa27.05■■□□□ 1.92
LMO2-201ENST00000257818 GANQ9H2C0 597 aa27.05■■□□□ 1.92
LMO2-201ENST00000257818 DHX36Q9H2U1 1008 aaKnown RBP27.05■■□□□ 1.92
LMO2-201ENST00000257818 PCDHA2Q9Y5H9 948 aa27.05■■□□□ 1.92
LMO2-201ENST00000257818 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.05■■□□□ 1.921e-7■■■□□ 17.2
LMO2-201ENST00000257818 C10orf71Q711Q0 1435 aa27.05■■□□□ 1.92
LMO2-201ENST00000257818 PPP1R37O75864 691 aa27.05■■□□□ 1.92
LMO2-201ENST00000257818 MARSP56192 900 aaKnown RBP27.05■■□□□ 1.92
LMO2-201ENST00000257818 KLHL30Q0D2K2 578 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms