RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 TMEM260Q9NX78 707 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 WDR91A4D1P6 747 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 GSCP56915 257 aaPredicted RBP13.4□□□□□ -0.26
USP30-201ENST00000257548 EVX2Q03828 476 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 ZNF844Q08AG5 666 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 ZRSR2Q15696 482 aaKnown RBP13.4□□□□□ -0.26
USP30-201ENST00000257548 THEMIS2Q5TEJ8 643 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 BRINP3Q76B58 766 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 LRP10Q7Z4F1 713 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 SH3RF1Q7Z6J0 888 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 UBOX5O94941 541 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 RHOBTB3O94955 611 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 GCNT3O95395 438 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 FLT3P36888 993 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 PLCB3Q01970 1234 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 ITGB3BPQ13352 177 aaPredicted RBP13.4□□□□□ -0.26
USP30-201ENST00000257548 SLC29A2Q14542 456 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 GLIS3Q8NEA6 775 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 ANKS1AQ92625 1134 aa13.4□□□□□ -0.26
USP30-201ENST00000257548 THRAP3Q9Y2W1 955 aaKnown RBP13.4□□□□□ -0.26
USP30-201ENST00000257548 ZNF335Q9H4Z2 1342 aaPredicted RBP13.4□□□□□ -0.27
USP30-201ENST00000257548 SFI1A8K8P3 1242 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 CHMP2AO43633 222 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 PLCG2P16885 1265 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 PPP1R2P41236 205 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 PFKFB3Q16875 520 aaPredicted RBP13.39□□□□□ -0.27
USP30-201ENST00000257548 TSNAXIP1Q2TAA8 658 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 ARMC9Q7Z3E5 817 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 FAM205AQ6ZU69 1335 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 MSH2P43246 934 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 RAD23BP54727 409 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 TROAPQ12815 778 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 PABPC4Q13310 644 aaKnown RBP eCLIP13.39□□□□□ -0.27
USP30-201ENST00000257548 IL17AQ16552 155 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 SEL1L2Q5TEA6 688 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 ARMC3Q5W041 872 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 KRT25Q7Z3Z0 450 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 ELOA2Q8IYF1 753 aaPredicted RBP13.39□□□□□ -0.27
USP30-201ENST00000257548 FBXL16Q8N461 479 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 CAVIN3Q969G5 261 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 PLCB1Q9NQ66 1216 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 MCM8Q9UJA3 840 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 PCDHA12Q9UN75 941 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 OVOS2A0A0G2JMS6 1433 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 KCNJ2P63252 427 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 PSMD2Q13200 908 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 LONRF1Q17RB8 773 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 SRRM1Q8IYB3 904 aaKnown RBP13.39□□□□□ -0.27
USP30-201ENST00000257548 METTL13Q8N6R0 699 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 NUCKS1Q9H1E3 243 aaKnown RBP13.39□□□□□ -0.27
USP30-201ENST00000257548 SEMA6BQ9H3T3 888 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 FAM114A2Q9NRY5 505 aa13.39□□□□□ -0.27
USP30-201ENST00000257548 POC1B-GALNT4F8VUJ3 575 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 SLC9A1P19634 815 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 CYP2J2P51589 502 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 IFI35P80217 286 aaPredicted RBP13.38□□□□□ -0.27
USP30-201ENST00000257548 CADPS2Q86UW7 1296 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 STMN2Q93045 179 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 MCUR1Q96AQ8 359 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 TRIM4Q9C037 500 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 CNOT10Q9H9A5 744 aaKnown RBP13.38□□□□□ -0.27
USP30-201ENST00000257548 MROH5Q6ZUA9 1318 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 JCADQ9P266 1359 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 MYMKA6NI61 221 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 DDAH1O94760 285 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 EEF2P13639 858 aaKnown RBP13.38□□□□□ -0.27
USP30-201ENST00000257548 ALDH3A1P30838 453 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 PDE6CP51160 858 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 PMS2P54278 862 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 KCNH2Q12809 1159 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 GLYCTKQ8IVS8 523 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 ZSCAN29Q8IWY8 852 aaPredicted RBP13.38□□□□□ -0.27
USP30-201ENST00000257548 SCYL3Q8IZE3 742 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 ZNF507Q8TCN5 953 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 PARD3BQ8TEW8 1205 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 AGAP11Q8TF27 550 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.38□□□□□ -0.27
USP30-201ENST00000257548 LRRC27Q9C0I9 530 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 ABCF3Q9NUQ8 709 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 MTUS1Q9ULD2 1270 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 HEG1Q9ULI3 1381 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 NPHP3-ACAD11A0A0J9YXS1 232 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 THAP12O43422 761 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 TRAPPC3O43617 180 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 KCNJ1P48048 391 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 ELF3P78545 371 aaPredicted RBP13.38□□□□□ -0.27
USP30-201ENST00000257548 PTK2Q05397 1052 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 SLC18A3Q16572 532 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 SPRED3Q2MJR0 410 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 VPS52Q8N1B4 723 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 PIGSQ96S52 555 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 CNOT8Q9UFF9 292 aaKnown RBP13.38□□□□□ -0.27
USP30-201ENST00000257548 TCEAL9Q9UHQ7 104 aa13.38□□□□□ -0.27
USP30-201ENST00000257548 ATP2A2P16615 1042 aaKnown RBP13.37□□□□□ -0.27
USP30-201ENST00000257548 MEA1Q16626 185 aa13.37□□□□□ -0.27
USP30-201ENST00000257548 SYCE1Q8N0S2 351 aa13.37□□□□□ -0.27
USP30-201ENST00000257548 SPICE1Q8N0Z3 855 aa13.37□□□□□ -0.27
USP30-201ENST00000257548 LRRC47Q8N1G4 583 aaKnown RBP13.37□□□□□ -0.27
USP30-201ENST00000257548 ZCWPW1Q9H0M4 648 aa13.37□□□□□ -0.27
USP30-201ENST00000257548 ISCUQ9H1K1 167 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms