RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 CCDC170Q8IYT3 715 aa17.38■□□□□ 0.37
LRFN1-201ENST00000248668 RABGAP1Q9Y3P9 1069 aa17.38■□□□□ 0.37
LRFN1-201ENST00000248668 PCDHA13Q9Y5I0 950 aa17.38■□□□□ 0.37
LRFN1-201ENST00000248668 GCOM1H8Y6P7 765 aaPredicted RBP17.38■□□□□ 0.37
LRFN1-201ENST00000248668 VIL1P09327 827 aaKnown RBP17.38■□□□□ 0.37
LRFN1-201ENST00000248668 POLR2MP0CAP2 368 aa17.38■□□□□ 0.37
LRFN1-201ENST00000248668 NAP1L1P55209 391 aaKnown RBP17.38■□□□□ 0.37
LRFN1-201ENST00000248668 MAEAQ7L5Y9 396 aa17.38■□□□□ 0.37
LRFN1-201ENST00000248668 CAGE1Q8TC20 777 aa17.38■□□□□ 0.37
LRFN1-201ENST00000248668 AGBL1Q96MI9 1066 aa17.38■□□□□ 0.37
LRFN1-201ENST00000248668 SAR1BQ9Y6B6 198 aa17.38■□□□□ 0.37
LRFN1-201ENST00000248668 TULP2O00295 520 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 TBCAO75347 108 aaKnown RBP17.37■□□□□ 0.37
LRFN1-201ENST00000248668 EGFRP00533 1210 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 VAV2P52735 878 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 MRPS25P82663 173 aaKnown RBP17.37■□□□□ 0.37
LRFN1-201ENST00000248668 RAPGEF1Q13905 1077 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 SPDYE2Q495Y8 402 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 FIGNQ5HY92 759 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 SYT2Q8N9I0 419 aaPredicted RBP17.37■□□□□ 0.37
LRFN1-201ENST00000248668 GMLQ99445 158 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 ABCB11O95342 1321 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 IGLV3-22A0A075B6J6 115 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 BUB1O43683 1085 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 ZMYND10O75800 440 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 MOXD1Q6UVY6 613 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 DNAAF5Q86Y56 855 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 FAM20AQ96MK3 541 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 ZCCHC17Q9NP64 241 aaKnown RBP17.37■□□□□ 0.37
LRFN1-201ENST00000248668 ARP10275 920 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 CXCR5P32302 372 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 VSNL1P62760 191 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 RASSF7Q02833 373 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 PLS1Q14651 629 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 WHAMMP3Q1A5X7 153 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 PDXDC1Q6P996 788 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 TRAPPC11Q7Z392 1133 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 NIM1KQ8IY84 436 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.37■□□□□ 0.37
LRFN1-201ENST00000248668 ZNF341Q9BYN7 854 aa17.37■□□□□ 0.37
LRFN1-201ENST00000248668 CETN3O15182 167 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 NOL4O94818 638 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 HOXD13P35453 343 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 CASP4P49662 377 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 LONRF2Q1L5Z9 754 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 ZC2HC1CQ53FD0 456 aaPredicted RBP17.36■□□□□ 0.37
LRFN1-201ENST00000248668 RTKN2Q8IZC4 609 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 SH2D3AQ9BRG2 576 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 VCPKMTQ9H867 229 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 SMARCAL1Q9NZC9 954 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 FEZ2Q9UHY8 353 aaPredicted RBP17.36■□□□□ 0.37
LRFN1-201ENST00000248668 GAS7O60861 476 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 NMT1P30419 496 aaKnown RBP17.36■□□□□ 0.37
LRFN1-201ENST00000248668 CXCL9Q07325 125 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 KCNH2Q12809 1159 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 LDHDQ86WU2 507 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 PCDHB13Q9Y5F0 798 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 TBX3O15119 743 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 KCNA3P22001 575 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 INPP5BP32019 993 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 MAGEA1P43355 309 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 MMP14P50281 582 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 TRIM59Q8IWR1 403 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 FAM133AQ8N9E0 248 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 SALL4Q9UJQ4 1053 aa17.36■□□□□ 0.37
LRFN1-201ENST00000248668 MYH10P35580 1976 aa17.35■□□□□ 0.37
LRFN1-201ENST00000248668 WNT10BO00744 389 aa17.35■□□□□ 0.37
LRFN1-201ENST00000248668 NCK2O43639 380 aa17.35■□□□□ 0.37
LRFN1-201ENST00000248668 CIITAP33076 1130 aa17.35■□□□□ 0.37
LRFN1-201ENST00000248668 MYCT1Q8N699 235 aa17.35■□□□□ 0.37
LRFN1-201ENST00000248668 TLR2O60603 784 aa17.35■□□□□ 0.37
LRFN1-201ENST00000248668 SLC9A1P19634 815 aa17.35■□□□□ 0.37
LRFN1-201ENST00000248668 KNOP1Q1ED39 458 aaKnown RBP17.35■□□□□ 0.37
LRFN1-201ENST00000248668 BANK1Q8NDB2 785 aa17.35■□□□□ 0.37
LRFN1-201ENST00000248668 CHURC1Q8WUH1 139 aa17.35■□□□□ 0.37
LRFN1-201ENST00000248668 GDAP1L1Q96MZ0 367 aa17.35■□□□□ 0.37
LRFN1-201ENST00000248668 ABCB6Q9NP58 842 aa17.35■□□□□ 0.37
LRFN1-201ENST00000248668 FAM53CQ9NYF3 392 aa17.35■□□□□ 0.37
LRFN1-201ENST00000248668 WRAP73Q9P2S5 460 aaPredicted RBP17.35■□□□□ 0.37
LRFN1-201ENST00000248668 USO1O60763 962 aaKnown RBP17.34■□□□□ 0.37
LRFN1-201ENST00000248668 SLITRK3O94933 977 aa17.34■□□□□ 0.37
LRFN1-201ENST00000248668 CAP2P40123 477 aa17.34■□□□□ 0.37
LRFN1-201ENST00000248668 OTOP1Q7RTM1 612 aa17.34■□□□□ 0.37
LRFN1-201ENST00000248668 EHD2Q9NZN4 543 aa17.34■□□□□ 0.37
LRFN1-201ENST00000248668 RGS17Q9UGC6 210 aaPredicted RBP17.34■□□□□ 0.37
LRFN1-201ENST00000248668 PDE2AO00408 941 aaPredicted RBP17.34■□□□□ 0.37
LRFN1-201ENST00000248668 ZBTB7AO95365 584 aa17.34■□□□□ 0.37
LRFN1-201ENST00000248668 MATR3P43243 847 aaKnown RBP eCLIP17.34■□□□□ 0.37
LRFN1-201ENST00000248668 TBC1D10BQ4KMP7 808 aaPredicted RBP17.34■□□□□ 0.37
LRFN1-201ENST00000248668 RINT1Q6NUQ1 792 aa17.34■□□□□ 0.37
LRFN1-201ENST00000248668 CEP63Q96MT8 703 aa17.34■□□□□ 0.37
LRFN1-201ENST00000248668 ZNF577Q9BSK1 485 aa17.34■□□□□ 0.37
LRFN1-201ENST00000248668 CCPG1Q9ULG6 757 aa17.34■□□□□ 0.37
LRFN1-201ENST00000248668 PITPNM2Q9BZ72 1349 aa17.34■□□□□ 0.37
LRFN1-201ENST00000248668 FRMD3A2A2Y4 597 aa17.34■□□□□ 0.37
LRFN1-201ENST00000248668 NFIBO00712 420 aa17.34■□□□□ 0.37
LRFN1-201ENST00000248668 AKAP3O75969 853 aa17.34■□□□□ 0.37
LRFN1-201ENST00000248668 FAM13AO94988 1023 aa17.34■□□□□ 0.37
LRFN1-201ENST00000248668 SFMBT2Q5VUG0 894 aa17.34■□□□□ 0.37
LRFN1-201ENST00000248668 ZNRF3Q9ULT6 936 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms