RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 ATP1A1P05023 1023 aaKnown RBP21.44■■□□□ 1.02
SOX4-201ENST00000244745 ZSCAN20P17040 1043 aaPredicted RBP21.44■■□□□ 1.02
SOX4-201ENST00000244745 PPP4R3CPQ6ZMV5 832 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 NME8Q8N427 588 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 CCHCR1Q8TD31 782 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 NSMCE1Q8WV22 266 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 OSBPL9Q96SU4 736 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 HSPA6P17066 643 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 EXOSC10Q01780 885 aaKnown RBP21.44■■□□□ 1.02
SOX4-201ENST00000244745 IQCB1Q15051 598 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 SLC17A8Q8NDX2 589 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 RAD54LQ92698 747 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 WDR11Q9BZH6 1224 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 CRB1P82279 1406 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 GUCY1A2P33402 732 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 USP42Q9H9J4 1324 aaKnown RBP21.44■■□□□ 1.02
SOX4-201ENST00000244745 SYNJ2BP-COX16A0A087WUM0 186 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 ANO9A1A5B4 782 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 PP2D1A8MPX8 630 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 USP17L5A8MUK1 530 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 MSH2P43246 934 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 LRRC23Q53EV4 343 aaPredicted RBP21.44■■□□□ 1.02
SOX4-201ENST00000244745 FBXO41Q8TF61 875 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 COX16Q9P0S2 106 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 ZNF609O15014 1411 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 LOC102724159A0A0B4J2E5 919 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 TTC26A0AVF1 554 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 PWP2Q15269 919 aaKnown RBP21.44■■□□□ 1.02
SOX4-201ENST00000244745 E4F1Q66K89 784 aaPredicted RBP21.44■■□□□ 1.02
SOX4-201ENST00000244745 ELAC2Q9BQ52 826 aaKnown RBP21.44■■□□□ 1.02
SOX4-201ENST00000244745 ACSL3O95573 720 aa21.43■■□□□ 1.02
SOX4-201ENST00000244745 HDLBPQ00341 1268 aaKnown RBP21.43■■□□□ 1.02
SOX4-201ENST00000244745 BMP3P12645 472 aa21.43■■□□□ 1.02
SOX4-201ENST00000244745 C6orf118Q5T5N4 469 aa21.43■■□□□ 1.02
SOX4-201ENST00000244745 PDCD7Q8N8D1 485 aaKnown RBP21.43■■□□□ 1.02
SOX4-201ENST00000244745 GOLGA8IPA6NC78 632 aa21.43■■□□□ 1.02
SOX4-201ENST00000244745 GOLGA8JA6NMD2 632 aa21.43■■□□□ 1.02
SOX4-201ENST00000244745 RNASELQ05823 741 aaKnown RBP21.43■■□□□ 1.02
SOX4-201ENST00000244745 RIOK1Q9BRS2 568 aaKnown RBP21.43■■□□□ 1.02
SOX4-201ENST00000244745 KANSL2Q9H9L4 492 aa21.43■■□□□ 1.02
SOX4-201ENST00000244745 HOXA7P31268 230 aaPredicted RBP21.43■■□□□ 1.02
SOX4-201ENST00000244745 ANO3Q9BYT9 981 aa21.43■■□□□ 1.02
SOX4-201ENST00000244745 GOLGA8SH3BPF8 625 aa21.42■■□□□ 1.02
SOX4-201ENST00000244745 DGKHQ86XP1 1220 aa21.42■■□□□ 1.02
SOX4-201ENST00000244745 ABTB1Q969K4 478 aaPredicted RBP21.42■■□□□ 1.02
SOX4-201ENST00000244745 TMEM260Q9NX78 707 aa21.42■■□□□ 1.02
SOX4-201ENST00000244745 PALLDQ8WX93 1383 aa21.42■■□□□ 1.02
SOX4-201ENST00000244745 A2ML1A8K2U0 1454 aa21.42■■□□□ 1.02
SOX4-201ENST00000244745 WDR91A4D1P6 747 aa21.42■■□□□ 1.02
SOX4-201ENST00000244745 CHGBP05060 677 aa21.42■■□□□ 1.02
SOX4-201ENST00000244745 PLS3P13797 630 aa21.42■■□□□ 1.02
SOX4-201ENST00000244745 USP14P54578 494 aa21.42■■□□□ 1.02
SOX4-201ENST00000244745 ADCY2Q08462 1091 aa21.42■■□□□ 1.02
SOX4-201ENST00000244745 RNF207Q6ZRF8 634 aa21.42■■□□□ 1.02
SOX4-201ENST00000244745 GARSP41250 739 aaKnown RBP21.42■■□□□ 1.02
SOX4-201ENST00000244745 CCDC117Q8IWD4 279 aaPredicted RBP21.42■■□□□ 1.02
SOX4-201ENST00000244745 CAPN9O14815 690 aa21.42■■□□□ 1.02
SOX4-201ENST00000244745 STAT2P52630 851 aa21.42■■□□□ 1.02
SOX4-201ENST00000244745 DBN1Q16643 649 aa21.42■■□□□ 1.02
SOX4-201ENST00000244745 HSP90AA5PQ58FG0 334 aa21.42■■□□□ 1.02
SOX4-201ENST00000244745 ZNF408Q9H9D4 720 aa21.42■■□□□ 1.02
SOX4-201ENST00000244745 FBXO2Q9UK22 296 aaPredicted RBP21.42■■□□□ 1.02
SOX4-201ENST00000244745 AXIN2Q9Y2T1 843 aa21.42■■□□□ 1.02
SOX4-201ENST00000244745 EXOC1LA0A1B0GW35 172 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 ESYT3A0FGR9 886 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 TRIM66O15016 1216 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 MXI1P50539 228 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 PARP9Q8IXQ6 854 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 DBNDD1Q9H9R9 158 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 A6NJR5 290 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 SART1O43290 800 aaKnown RBP21.41■■□□□ 1.02
SOX4-201ENST00000244745 TADA3O75528 432 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 MMEP08473 750 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 SKIP12755 728 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 COASYQ13057 564 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 SCARF1Q14162 830 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 ZNF449Q6P9G9 518 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 HVCN1Q96D96 273 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 BHMT2Q9H2M3 363 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 HESX1Q9UBX0 185 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 IGBP1P78318 339 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 SESTD1Q86VW0 696 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 NRBP2Q9NSY0 501 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 SNX24Q9Y343 169 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 AFG3L2Q9Y4W6 797 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 BEND6Q5SZJ8 279 aaPredicted RBP21.41■■□□□ 1.02
SOX4-201ENST00000244745 NLRP14Q86W24 1093 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 DNAJC12Q9UKB3 198 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 ARHGEF40Q8TER5 1519 aa21.41■■□□□ 1.02
SOX4-201ENST00000244745 TXNRD1Q16881 649 aa21.4■■□□□ 1.02
SOX4-201ENST00000244745 YIPF3Q9GZM5 350 aa21.4■■□□□ 1.02
SOX4-201ENST00000244745 THEGQ9P2T0 379 aa21.4■■□□□ 1.02
SOX4-201ENST00000244745 RPS6KA2Q15349 733 aa21.4■■□□□ 1.02
SOX4-201ENST00000244745 CDKL2Q92772 493 aa21.4■■□□□ 1.02
SOX4-201ENST00000244745 TMEM47Q9BQJ4 181 aa21.4■■□□□ 1.02
SOX4-201ENST00000244745 INTUQ9ULD6 942 aa21.4■■□□□ 1.02
SOX4-201ENST00000244745 FMR1Q06787 632 aaKnown RBP eCLIP21.4■■□□□ 1.02
SOX4-201ENST00000244745 BRDTQ58F21 947 aaPredicted RBP21.4■■□□□ 1.02
SOX4-201ENST00000244745 IL25Q9H293 177 aa21.4■■□□□ 1.02
SOX4-201ENST00000244745 SRP68Q9UHB9 627 aaKnown RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms