RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 CD2APQ9Y5K6 639 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 MYMKA6NI61 221 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 PPP1R12AO14974 1030 aaPredicted RBP10.08□□□□□ -0.8
SRSF6-201ENST00000244020 TTI1O43156 1089 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 PRPHP41219 470 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 SPRED3Q2MJR0 410 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 AGBL2Q5U5Z8 902 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 GALNT17Q6IS24 598 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 C1orf131Q8NDD1 294 aaKnown RBP10.08□□□□□ -0.8
SRSF6-201ENST00000244020 INPP4AQ96PE3 977 aaPredicted RBP10.08□□□□□ -0.8
SRSF6-201ENST00000244020 XPO6Q96QU8 1125 aaKnown RBP10.08□□□□□ -0.8
SRSF6-201ENST00000244020 FMO2Q99518 471 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 CPVLQ9H3G5 476 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 CNOT8Q9UFF9 292 aaKnown RBP10.08□□□□□ -0.8
SRSF6-201ENST00000244020 NOC2LQ9Y3T9 749 aaKnown RBP10.08□□□□□ -0.8
SRSF6-201ENST00000244020 MYH6P13533 1939 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 MYH13Q9UKX3 1938 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 DCDC2CA8MYV0 355 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 EVX2Q03828 476 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 SETDB1Q15047 1291 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 ZKSCAN8Q15776 578 aaPredicted RBP10.08□□□□□ -0.8
SRSF6-201ENST00000244020 CALCRLQ16602 461 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 DENND2CQ68D51 928 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 CEP120Q8N960 986 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 TATDN2Q93075 761 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 IFT74Q96LB3 600 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.08□□□□□ -0.86e-12■■□□□ 12
SRSF6-201ENST00000244020 KDM4CQ9H3R0 1056 aa10.08□□□□□ -0.8
SRSF6-201ENST00000244020 DISP2A7MBM2 1401 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 ORC4O43929 436 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 HIP1RO75146 1068 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 KRT13P13646 458 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 MRPL12P52815 198 aaKnown RBP10.07□□□□□ -0.8
SRSF6-201ENST00000244020 ELF3P78545 371 aaPredicted RBP10.07□□□□□ -0.8
SRSF6-201ENST00000244020 EMC10Q5UCC4 262 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 ECM29Q5VYK3 1845 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 TMED8Q6PL24 325 aaPredicted RBP10.07□□□□□ -0.8
SRSF6-201ENST00000244020 BCL9LQ86UU0 1499 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 DNAAF5Q86Y56 855 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 STAMBPL1Q96FJ0 436 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 RIOK1Q9BRS2 568 aaKnown RBP10.07□□□□□ -0.8
SRSF6-201ENST00000244020 CELF4Q9BZC1 486 aaKnown RBP10.07□□□□□ -0.8
SRSF6-201ENST00000244020 RIC8AQ9NPQ8 531 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 SLC12A6Q9UHW9 1150 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 GGT7Q9UJ14 662 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 POLD1P28340 1107 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 MUM1Q2TAK8 710 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 TBCKQ8TEA7 893 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 DDX12PQ92771 950 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 SMC6Q96SB8 1091 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 L3MBTL1Q9Y468 752 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 PVALEFA0A1B0GWK0 134 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 CCDC188H7C350 402 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 CHN1P15882 459 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 FLT3P36888 993 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 PSMC4P43686 418 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 XRCC4Q13426 336 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 ACCSLQ4AC99 568 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 HGSNATQ68CP4 663 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 UIMC1Q96RL1 719 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 RAB17Q9H0T7 212 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 PCDHGC5Q9Y5F6 944 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 KIF1AQ12756 1690 aa10.07□□□□□ -0.8
SRSF6-201ENST00000244020 FLOT1O75955 427 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 ANP32DO95626 131 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 PLTPP55058 493 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 UAP1Q16222 522 aaPredicted RBP10.06□□□□□ -0.8
SRSF6-201ENST00000244020 ALKBH5Q6P6C2 394 aaKnown RBP10.06□□□□□ -0.8
SRSF6-201ENST00000244020 GSDMBQ8TAX9 411 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 MGARPQ8TDB4 240 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 LRRC15Q8TF66 581 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 USP54Q70EL1 1684 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 SPDYE3A6NKU9 549 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 KLRF2D3W0D1 207 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 SLCO1A2P46721 670 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 EIF3BP55884 814 aaKnown RBP10.06□□□□□ -0.8
SRSF6-201ENST00000244020 HERC4Q5GLZ8 1057 aaPredicted RBP10.06□□□□□ -0.8
SRSF6-201ENST00000244020 DCAF17Q5H9S7 520 aaPredicted RBP10.06□□□□□ -0.8
SRSF6-201ENST00000244020 PIGBQ92521 554 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 TAOK3Q9H2K8 898 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 DCP1AQ9NPI6 582 aaPredicted RBP10.06□□□□□ -0.8
SRSF6-201ENST00000244020 HOMER2Q9NSB8 354 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 BARHL2Q9NY43 387 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 CCDC169A6NNP5 214 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 CAND2O75155 1236 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 FGGP02679 453 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 ITGA4P13612 1032 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 USP11P51784 963 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 KCNMA1Q12791 1236 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 ADAM9Q13443 819 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 ASTE1Q2TB18 679 aaPredicted RBP10.06□□□□□ -0.8
SRSF6-201ENST00000244020 GRIPAP1Q4V328 841 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 SUSD4Q5VX71 490 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 FAM228AQ86W67 206 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 METTL13Q8N6R0 699 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 CCT6BQ92526 530 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 HOOK2Q96ED9 719 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 PANK4Q9NVE7 773 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 USP17L3A6NCW0 530 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 USP17L4A6NCW7 530 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms