RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 VAT1LQ9HCJ6 419 aa9.7□□□□□ -0.86
IFT43-201ENST00000238628 NCDNQ9UBB6 729 aa9.7□□□□□ -0.86
IFT43-201ENST00000238628 MRPL11Q9Y3B7 192 aaKnown RBP9.7□□□□□ -0.86
IFT43-201ENST00000238628 SOBPA7XYQ1 873 aa9.69□□□□□ -0.86
IFT43-201ENST00000238628 C2CD4DB7Z1M9 353 aa9.69□□□□□ -0.86
IFT43-201ENST00000238628 DHX16O60231 1041 aaKnown RBP9.69□□□□□ -0.86
IFT43-201ENST00000238628 F2P00734 622 aa9.69□□□□□ -0.86
IFT43-201ENST00000238628 CFBP00751 764 aa9.69□□□□□ -0.86
IFT43-201ENST00000238628 MYCLP12524 364 aaPredicted RBP9.69□□□□□ -0.86
IFT43-201ENST00000238628 NPR3P17342 541 aa9.69□□□□□ -0.86
IFT43-201ENST00000238628 TECP42680 631 aa9.69□□□□□ -0.86
IFT43-201ENST00000238628 NAALADL2Q58DX5 795 aa9.69□□□□□ -0.86
IFT43-201ENST00000238628 KLHL23Q8NBE8 558 aa9.69□□□□□ -0.86
IFT43-201ENST00000238628 PPTC7Q8NI37 304 aa9.69□□□□□ -0.86
IFT43-201ENST00000238628 ATP8B4Q8TF62 1192 aa9.69□□□□□ -0.86
IFT43-201ENST00000238628 ESR2Q92731 530 aa9.69□□□□□ -0.86
IFT43-201ENST00000238628 KAT6AQ92794 2004 aa9.69□□□□□ -0.86
IFT43-201ENST00000238628 S1PR5Q9H228 398 aa9.69□□□□□ -0.86
IFT43-201ENST00000238628 RNF41Q9H4P4 317 aaPredicted RBP9.69□□□□□ -0.86
IFT43-201ENST00000238628 LIMD1Q9UGP4 676 aa9.69□□□□□ -0.86
IFT43-201ENST00000238628 PCDHB15Q9Y5E8 787 aa9.69□□□□□ -0.86
IFT43-201ENST00000238628 A0A0D9SFI3 127 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 FSD2A1L4K1 749 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 SORBS3O60504 671 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 PPFIA3O75145 1194 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 FXR2P51116 673 aaKnown RBP eCLIP9.68□□□□□ -0.86
IFT43-201ENST00000238628 LMNB2Q03252 620 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 HIC1Q14526 733 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 QRICH1Q2TAL8 776 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 CCDC178Q5BJE1 867 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 PPM1JQ5JR12 505 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 VARS2Q5ST30 1063 aaKnown RBP9.68□□□□□ -0.86
IFT43-201ENST00000238628 ANKRD45Q5TZF3 282 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 MYSM1Q5VVJ2 828 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 ANKRD54Q6NXT1 300 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 KCNV1Q6PIU1 500 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 IQCA1Q86XH1 822 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 SUMF1Q8NBK3 374 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 PNMA1Q8ND90 353 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 VN1R2Q8NFZ6 395 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 APBB2Q92870 758 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 ATP6V0A1Q93050 837 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 SPATA33Q96N06 139 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 CDCA3Q99618 268 aaPredicted RBP9.68□□□□□ -0.86
IFT43-201ENST00000238628 KAT14Q9H8E8 782 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 PXMP2Q9NR77 195 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 FBXL21Q9UKT6 434 aa9.68□□□□□ -0.86
IFT43-201ENST00000238628 ZMYM6O95789 1325 aa9.67□□□□□ -0.86
IFT43-201ENST00000238628 SALL3Q9BXA9 1300 aa9.67□□□□□ -0.86
IFT43-201ENST00000238628 C17orf102A2RUQ5 167 aa9.67□□□□□ -0.86
IFT43-201ENST00000238628 ZNF213O14771 459 aa9.67□□□□□ -0.86
IFT43-201ENST00000238628 KINO60870 393 aaKnown RBP9.67□□□□□ -0.86
IFT43-201ENST00000238628 GGPS1O95749 300 aa9.67□□□□□ -0.86
IFT43-201ENST00000238628 PARP1P09874 1014 aaKnown RBP9.67□□□□□ -0.86
IFT43-201ENST00000238628 SP9P0CG40 484 aa9.67□□□□□ -0.86
IFT43-201ENST00000238628 RFX1P22670 979 aa9.67□□□□□ -0.86
IFT43-201ENST00000238628 NMIQ13287 307 aaPredicted RBP9.67□□□□□ -0.86
IFT43-201ENST00000238628 HSDL1Q3SXM5 330 aa9.67□□□□□ -0.86
IFT43-201ENST00000238628 ASPRV1Q53RT3 343 aa9.67□□□□□ -0.86
IFT43-201ENST00000238628 CELF3Q5SZQ8 465 aaKnown RBP9.67□□□□□ -0.86
IFT43-201ENST00000238628 ZNF589Q86UQ0 364 aaPredicted RBP9.67□□□□□ -0.86
IFT43-201ENST00000238628 SERINC5Q86VE9 423 aa9.67□□□□□ -0.86
IFT43-201ENST00000238628 TBC1D10CQ8IV04 446 aa9.67□□□□□ -0.86
IFT43-201ENST00000238628 CRIPAKQ8N1N5 446 aa9.67□□□□□ -0.86
IFT43-201ENST00000238628 SECISBP2LQ93073 1101 aaKnown RBP9.67□□□□□ -0.86
IFT43-201ENST00000238628 C16orf70Q9BSU1 422 aa9.67□□□□□ -0.86
IFT43-201ENST00000238628 AMNQ9BXJ7 453 aa9.67□□□□□ -0.86
IFT43-201ENST00000238628 OSBPL7Q9BZF2 842 aa9.67□□□□□ -0.86
IFT43-201ENST00000238628 JMJD4Q9H9V9 463 aa9.67□□□□□ -0.86
IFT43-201ENST00000238628 MLXIPQ9HAP2 919 aa9.67□□□□□ -0.86
IFT43-201ENST00000238628 ANGPTL2Q9UKU9 493 aa9.67□□□□□ -0.86
IFT43-201ENST00000238628 NEDD4P46934 1319 aa9.66□□□□□ -0.86
IFT43-201ENST00000238628 CCDC171Q6TFL3 1326 aa9.66□□□□□ -0.86
IFT43-201ENST00000238628 TRIM6-TRIM34B2RNG4 842 aa9.66□□□□□ -0.86
IFT43-201ENST00000238628 H3BRB1 525 aa9.66□□□□□ -0.86
IFT43-201ENST00000238628 TREHO43280 583 aa9.66□□□□□ -0.86
IFT43-201ENST00000238628 CTSHP09668 335 aa9.66□□□□□ -0.86
IFT43-201ENST00000238628 TGFB3P10600 412 aa9.66□□□□□ -0.86
IFT43-201ENST00000238628 HOXD8P13378 290 aaPredicted RBP9.66□□□□□ -0.86
IFT43-201ENST00000238628 KCNA4P22459 653 aa9.66□□□□□ -0.86
IFT43-201ENST00000238628 HSD17B4P51659 736 aa9.66□□□□□ -0.86
IFT43-201ENST00000238628 PDE1AP54750 535 aa9.66□□□□□ -0.86
IFT43-201ENST00000238628 MFAP1P55081 439 aaKnown RBP9.66□□□□□ -0.86
IFT43-201ENST00000238628 SP2Q02086 613 aa9.66□□□□□ -0.86
IFT43-201ENST00000238628 DUSP6Q16828 381 aa9.66□□□□□ -0.86
IFT43-201ENST00000238628 DIEXFQ68CQ4 756 aaKnown RBP9.66□□□□□ -0.86
IFT43-201ENST00000238628 CES5AQ6NT32 575 aa9.66□□□□□ -0.86
IFT43-201ENST00000238628 SYCE2Q6PIF2 218 aa9.66□□□□□ -0.86
IFT43-201ENST00000238628 VSIG10LQ86VR7 867 aa9.66□□□□□ -0.86
IFT43-201ENST00000238628 TICAM2Q86XR7 235 aa9.66□□□□□ -0.86
IFT43-201ENST00000238628 SIX5Q8N196 739 aa9.66□□□□□ -0.86
IFT43-201ENST00000238628 ZNF689Q96CS4 500 aaPredicted RBP9.66□□□□□ -0.86
IFT43-201ENST00000238628 ZFP91Q96JP5 570 aaPredicted RBP9.66□□□□□ -0.86
IFT43-201ENST00000238628 ZSCAN10Q96SZ4 725 aaPredicted RBP9.66□□□□□ -0.86
IFT43-201ENST00000238628 PDCD2LQ9BRP1 358 aa9.66□□□□□ -0.86
IFT43-201ENST00000238628 RNPEPQ9H4A4 650 aa9.66□□□□□ -0.86
IFT43-201ENST00000238628 POMKQ9H5K3 350 aa9.66□□□□□ -0.86
IFT43-201ENST00000238628 TUT1Q9H6E5 874 aaKnown RBP9.66□□□□□ -0.86
IFT43-201ENST00000238628 RC3H2Q9HBD1 1191 aaKnown RBP9.66□□□□□ -0.86
IFT43-201ENST00000238628 ERVK-5Q9HDB9 667 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms