RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 LRRC43Q8N309 656 aa2.64□□□□□ -1.99
PRKD3-201ENST00000234179 RUFY2Q8WXA3 655 aa2.64□□□□□ -1.99
PRKD3-201ENST00000234179 MRPS27Q92552 414 aaKnown RBP2.64□□□□□ -1.99
PRKD3-201ENST00000234179 ZNF689Q96CS4 500 aaPredicted RBP2.64□□□□□ -1.99
PRKD3-201ENST00000234179 ZNF558Q96NG5 402 aa2.64□□□□□ -1.99
PRKD3-201ENST00000234179 CYP26B1Q9NR63 512 aa2.64□□□□□ -1.99
PRKD3-201ENST00000234179 TMEM161AQ9NX61 479 aa2.64□□□□□ -1.99
PRKD3-201ENST00000234179 USP15Q9Y4E8 981 aaPredicted RBP2.64□□□□□ -1.99
PRKD3-201ENST00000234179 CACNA1HO95180 2353 aa2.64□□□□□ -1.99
PRKD3-201ENST00000234179 TRIM6-TRIM34B2RNG4 842 aa2.64□□□□□ -1.99
PRKD3-201ENST00000234179 SPATA31C2B4DYI2 1134 aa2.64□□□□□ -1.99
PRKD3-201ENST00000234179 H3BQ06 376 aaPredicted RBP2.64□□□□□ -1.99
PRKD3-201ENST00000234179 PAK2Q13177 524 aa2.64□□□□□ -1.99
PRKD3-201ENST00000234179 PCBP1Q15365 356 aaKnown RBP eCLIP2.64□□□□□ -1.99
PRKD3-201ENST00000234179 ZNF528Q3MIS6 628 aa2.64□□□□□ -1.99
PRKD3-201ENST00000234179 PHLDB3Q6NSJ2 640 aa2.64□□□□□ -1.99
PRKD3-201ENST00000234179 ANKRD54Q6NXT1 300 aa2.64□□□□□ -1.99
PRKD3-201ENST00000234179 NIPA1Q7RTP0 329 aa2.64□□□□□ -1.99
PRKD3-201ENST00000234179 PLPPR4Q7Z2D5 763 aa2.64□□□□□ -1.99
PRKD3-201ENST00000234179 PNMA1Q8ND90 353 aa2.64□□□□□ -1.99
PRKD3-201ENST00000234179 CNNM3Q8NE01 707 aa2.64□□□□□ -1.99
PRKD3-201ENST00000234179 C22orf23Q9BZE7 217 aa2.64□□□□□ -1.99
PRKD3-201ENST00000234179 DACT1Q9NYF0 836 aa2.64□□□□□ -1.99
PRKD3-201ENST00000234179 PCDHA2Q9Y5H9 948 aa2.64□□□□□ -1.99
PRKD3-201ENST00000234179 NFASCO94856 1347 aa2.64□□□□□ -1.99
PRKD3-201ENST00000234179 PIK3CDO00329 1044 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 FSCN2O14926 492 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 DKC1O60832 514 aaKnown RBP eCLIP2.63□□□□□ -1.99
PRKD3-201ENST00000234179 KDM4AO75164 1064 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 DGKIO75912 1065 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 MX1P20591 662 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 UBA1P22314 1058 aaKnown RBP2.63□□□□□ -1.99
PRKD3-201ENST00000234179 ZNF318Q5VUA4 2279 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 KIAA1841Q6NSI8 718 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 CCDC105Q8IYK2 499 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 ABI1Q8IZP0 508 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 SPPL3Q8TCT6 385 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 MSANTD3Q96H12 275 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 DSCC1Q9BVC3 393 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 GPCPD1Q9NPB8 672 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 SPG21Q9NZD8 308 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 WNT16Q9UBV4 365 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 RAPGEFL1Q9UHV5 662 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 METRNQ9UJH8 293 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 TRPC6Q9Y210 931 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 MRPS17Q9Y2R5 130 aaKnown RBP2.63□□□□□ -1.99
PRKD3-201ENST00000234179 ENPP3O14638 875 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 ZNF213O14771 459 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 HBP1O60381 514 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 PRDM1O75626 825 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 LMNAP02545 664 aaKnown RBP2.63□□□□□ -1.99
PRKD3-201ENST00000234179 POU2F2P09086 479 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 AOC1P19801 751 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 TMOD1P28289 359 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 TBC1D8BQ0IIM8 1120 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 QRICH1Q2TAL8 776 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 FBXO47Q5MNV8 452 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 PCNX4Q63HM2 1172 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 SLC24A5Q71RS6 500 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 THNSL1Q8IYQ7 743 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 HACE1Q8IYU2 909 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 SMARCC2Q8TAQ2 1214 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 MTMR8Q96EF0 704 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 MAP7D2Q96T17 732 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 RTKNQ9BST9 563 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 EMILIN2Q9BXX0 1053 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 ADAM7Q9H2U9 754 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 CHST12Q9NRB3 414 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 SEC63Q9UGP8 760 aaKnown RBP2.63□□□□□ -1.99
PRKD3-201ENST00000234179 TUBE1Q9UJT0 475 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 FBXO4Q9UKT5 387 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 PCDHB7Q9Y5E2 793 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 IRAK3Q9Y616 596 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 MYH7P12883 1935 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 COL4A4P53420 1690 aaPredicted RBP2.63□□□□□ -1.99
PRKD3-201ENST00000234179 ZDBF2Q9HCK1 2354 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 PNMA6FA0A0J9YX94 578 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 ARHGAP4P98171 946 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 PFKPQ01813 784 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 TCF15Q12870 199 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 PDXDC1Q6P996 788 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 DGLUCYQ7Z3D6 616 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 MICAL1Q8TDZ2 1067 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 RUBCNQ92622 972 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 C16orf70Q9BSU1 422 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 SFXN1Q9H9B4 322 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 CD320Q9NPF0 282 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 UBN1Q9NPG3 1134 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.63□□□□□ -1.99
PRKD3-201ENST00000234179 MUTYHQ9UIF7 546 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.63□□□□□ -1.99
PRKD3-201ENST00000234179 LCHNA4D1U4 455 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 EOMESO95936 686 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 EIF2AK2P19525 551 aaKnown RBP2.63□□□□□ -1.99
PRKD3-201ENST00000234179 LTBRP36941 435 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 ADAM17P78536 824 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 SPOUT1Q5T280 376 aaKnown RBP2.63□□□□□ -1.99
PRKD3-201ENST00000234179 CTCFLQ8NI51 663 aaPredicted RBP2.63□□□□□ -1.99
PRKD3-201ENST00000234179 PGBD4Q96DM1 585 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 TAAR1Q96RJ0 339 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms