RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 TSPAN1O60635 241 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 GNAT1P11488 350 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 RXRAP19793 462 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 DNAJB1P25685 340 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 MARSP56192 900 aaKnown RBP9.1□□□□□ -0.95
SPARC-201ENST00000231061 IFIT5Q13325 482 aaKnown RBP9.1□□□□□ -0.95
SPARC-201ENST00000231061 SARM1Q6SZW1 724 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 KIF6Q6ZMV9 814 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 ANKRD42Q8N9B4 389 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 DRC3Q9H069 523 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 DDX18Q9NVP1 670 aaKnown RBP9.1□□□□□ -0.95
SPARC-201ENST00000231061 KRBA1A5PL33 1030 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 TRIM75PA6NK02 468 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 MCM3P25205 808 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 MARCKSP29966 332 aaPredicted RBP9.1□□□□□ -0.95
SPARC-201ENST00000231061 MTHFRP42898 656 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 ROR2Q01974 943 aaKnown RBP9.1□□□□□ -0.95
SPARC-201ENST00000231061 MAP7Q14244 749 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 SF3B3Q15393 1217 aaKnown RBP9.1□□□□□ -0.95
SPARC-201ENST00000231061 PGBD3Q8N328 593 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 ENGASEQ8NFI3 743 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 KCNG4Q8TDN1 519 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 FAM161BQ96MY7 647 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 TEX13BQ9BXU2 312 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 AGXT2Q9BYV1 514 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 PUS7LQ9H0K6 701 aaKnown RBP9.1□□□□□ -0.95
SPARC-201ENST00000231061 ARNT2Q9HBZ2 717 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 FAM53CQ9NYF3 392 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 ZC3H7BQ9UGR2 993 aaKnown RBP9.1□□□□□ -0.95
SPARC-201ENST00000231061 SALL1Q9NSC2 1324 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 TRPM3Q9HCF6 1732 aaPredicted RBP9.1□□□□□ -0.95
SPARC-201ENST00000231061 TMEM247A6NEH6 219 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 GPAA1O43292 621 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 EVI5O60447 810 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 PFDN1O60925 122 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 IDH1O75874 414 aaKnown RBP9.1□□□□□ -0.95
SPARC-201ENST00000231061 CIAO1O76071 339 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 ZFYP08048 801 aaPredicted RBP9.1□□□□□ -0.95
SPARC-201ENST00000231061 SLC3A2P08195 630 aaKnown RBP9.1□□□□□ -0.95
SPARC-201ENST00000231061 CCT8P50990 548 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 BOLA3Q53S33 107 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 ADALQ6DHV7 355 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 RASSF3Q86WH2 238 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 FAM20CQ8IXL6 584 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 NAT8LQ8N9F0 302 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 TTPALQ9BTX7 342 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 CAPN10Q9HC96 672 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 PREBQ9HCU5 417 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 LMTK3Q96Q04 1460 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 SPDYE5A6NIY4 337 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 KRT18P05783 430 aaKnown RBP9.09□□□□□ -0.95
SPARC-201ENST00000231061 MLH1P40692 756 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 AKAP17AQ02040 695 aaKnown RBP9.09□□□□□ -0.95
SPARC-201ENST00000231061 ACTN3Q08043 901 aaPredicted RBP9.09□□□□□ -0.95
SPARC-201ENST00000231061 DPCR1Q3MIW9 517 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 HABP4Q5JVS0 413 aaKnown RBP9.09□□□□□ -0.95
SPARC-201ENST00000231061 CFAP161Q6P656 301 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 FMR1NBQ8N0W7 255 aaPredicted RBP9.09□□□□□ -0.95
SPARC-201ENST00000231061 ZBTB8BQ8NAP8 495 aaPredicted RBP9.09□□□□□ -0.95
SPARC-201ENST00000231061 LINC00301Q8NCQ3 95 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 MTMR9Q96QG7 549 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 NDEL1Q9GZM8 345 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 PLEKHA4Q9H4M7 779 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 LUC7LQ9NQ29 371 aaKnown RBP9.09□□□□□ -0.95
SPARC-201ENST00000231061 CNNM1Q9NRU3 951 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 ADAMTS7Q9UKP4 1686 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 ARFGEF2Q9Y6D5 1785 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 FAM221BA6H8Z2 402 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 FESP07332 822 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 EVI2BP34910 448 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 ATP6V1E1P36543 226 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 HAAOP46952 286 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 PLA2G4AP47712 749 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 CTCFP49711 727 aaPredicted RBP9.09□□□□□ -0.95
SPARC-201ENST00000231061 PPM1NQ8N819 430 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 OSBPL9Q96SU4 736 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 TCF7L2Q9NQB0 619 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 IFNKQ9P0W0 207 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 DNAI1Q9UI46 699 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 LNPEPQ9UIQ6 1025 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 LAMP5Q9UJQ1 280 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 ZNF180Q9UJW8 692 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 NOSIPQ9Y314 301 aaKnown RBP9.09□□□□□ -0.95
SPARC-201ENST00000231061 GOLGA8AA7E2F4 631 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 GOLGA8MH3BSY2 632 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 TADA3O75528 432 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 FBXO21O94952 628 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 GOLM1Q8NBJ4 401 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 SPOCK2Q92563 424 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 CABS1Q96KC9 395 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 CENPHQ9H3R5 247 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 VRTNQ9H8Y1 702 aa9.09□□□□□ -0.95
SPARC-201ENST00000231061 PSMA3P25788 255 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 LDHAL6AQ6ZMR3 332 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 MICU3Q86XE3 530 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 DGKHQ86XP1 1220 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 AIFM3Q96NN9 605 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 TSC22D3Q99576 134 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 KANSL2Q9H9L4 492 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 EFR3BQ9Y2G0 817 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms