RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 ZBED2Q9BTP6 218 aa16.18■□□□□ 0.18
GPN3-201ENST00000228827 TUBE1Q9UJT0 475 aa16.18■□□□□ 0.18
GPN3-201ENST00000228827 TRPC6Q9Y210 931 aa16.18■□□□□ 0.18
GPN3-201ENST00000228827 DTNBO60941 627 aa16.17■□□□□ 0.18
GPN3-201ENST00000228827 CAND2O75155 1236 aa16.17■□□□□ 0.18
GPN3-201ENST00000228827 INSRRP14616 1297 aa16.17■□□□□ 0.18
GPN3-201ENST00000228827 ADGRE1Q14246 886 aa16.17■□□□□ 0.18
GPN3-201ENST00000228827 FAM117BQ6P1L5 589 aa16.17■□□□□ 0.18
GPN3-201ENST00000228827 CPLX2Q6PUV4 134 aaKnown RBP16.17■□□□□ 0.18
GPN3-201ENST00000228827 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.17■□□□□ 0.181e-8■■■■■ 27.7
GPN3-201ENST00000228827 ZNF577Q9BSK1 485 aa16.17■□□□□ 0.18
GPN3-201ENST00000228827 CDH23Q9H251 3354 aa16.17■□□□□ 0.18
GPN3-201ENST00000228827 IPO5O00410 1097 aaKnown RBP16.16■□□□□ 0.18
GPN3-201ENST00000228827 BACH1O14867 736 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 DEXIO95424 95 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 STAT5BP51692 787 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 SCRN1Q12765 414 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 PLCB4Q15147 1175 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 PRR16Q569H4 304 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 MARCH8Q5T0T0 291 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 USP38Q8NB14 1042 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 TRAPPC12Q8WVT3 735 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 DNAJB3Q8WWF6 145 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 SEPT8Q92599 483 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 AIFM3Q96NN9 605 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 SH3GLB2Q9NR46 395 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 CHD9Q3L8U1 2897 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 LCHNA4D1U4 455 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 RFXAPO00287 272 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 DHX15O43143 795 aaKnown RBP16.16■□□□□ 0.18
GPN3-201ENST00000228827 EFCAB14O75071 495 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 SETQ01105 290 aaPredicted RBP16.16■□□□□ 0.18
GPN3-201ENST00000228827 TAP1Q03518 808 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 PLEKHG4Q58EX7 1191 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 TAF2Q6P1X5 1199 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 ABHD15Q6UXT9 468 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 PLPPR4Q7Z2D5 763 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 SPRED2Q7Z698 418 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 MYOCDQ8IZQ8 938 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 ARNTL2Q8WYA1 636 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 FAM49AQ9H0Q0 323 aaPredicted RBP16.16■□□□□ 0.18
GPN3-201ENST00000228827 SLKQ9H2G2 1235 aaPredicted RBP16.16■□□□□ 0.18
GPN3-201ENST00000228827 TPCN1Q9ULQ1 816 aa16.16■□□□□ 0.18
GPN3-201ENST00000228827 POTEB3A0JP26 581 aa16.15■□□□□ 0.18
GPN3-201ENST00000228827 MBLAC1A4D2B0 266 aaPredicted RBP16.15■□□□□ 0.18
GPN3-201ENST00000228827 RRN3P2A6NIE6 340 aa16.15■□□□□ 0.18
GPN3-201ENST00000228827 ATG7O95352 703 aa16.15■□□□□ 0.18
GPN3-201ENST00000228827 CHRNA1P02708 482 aa16.15■□□□□ 0.18
GPN3-201ENST00000228827 ANAPC15P60006 121 aa16.15■□□□□ 0.18
GPN3-201ENST00000228827 CCDC85BQ15834 202 aaPredicted RBP16.15■□□□□ 0.18
GPN3-201ENST00000228827 FAM26DQ5JW98 314 aa16.15■□□□□ 0.18
GPN3-201ENST00000228827 MIS18BP1Q6P0N0 1132 aa16.15■□□□□ 0.18
GPN3-201ENST00000228827 POTEBQ6S5H4 581 aa16.15■□□□□ 0.18
GPN3-201ENST00000228827 RSPH3Q86UC2 560 aa16.15■□□□□ 0.18
GPN3-201ENST00000228827 CCDC60Q8IWA6 550 aaPredicted RBP16.15■□□□□ 0.18
GPN3-201ENST00000228827 MICALL1Q8N3F8 863 aa16.15■□□□□ 0.18
GPN3-201ENST00000228827 PCDHA4Q9UN74 947 aa16.15■□□□□ 0.18
GPN3-201ENST00000228827 EPOPA6NHQ4 379 aa16.14■□□□□ 0.17
GPN3-201ENST00000228827 GJB5O95377 273 aa16.14■□□□□ 0.17
GPN3-201ENST00000228827 SEC24BO95487 1268 aa16.14■□□□□ 0.17
GPN3-201ENST00000228827 AMHP03971 560 aa16.14■□□□□ 0.17
GPN3-201ENST00000228827 GHRP10912 638 aa16.14■□□□□ 0.17
GPN3-201ENST00000228827 CIITAP33076 1130 aa16.14■□□□□ 0.17
GPN3-201ENST00000228827 AK2P54819 239 aa16.14■□□□□ 0.17
GPN3-201ENST00000228827 FAM160B1Q5W0V3 765 aa16.14■□□□□ 0.17
GPN3-201ENST00000228827 SWSAP1Q6NVH7 229 aa16.14■□□□□ 0.17
GPN3-201ENST00000228827 TRMT1LQ7Z2T5 733 aaKnown RBP16.14■□□□□ 0.17
GPN3-201ENST00000228827 TBCKQ8TEA7 893 aa16.14■□□□□ 0.17
GPN3-201ENST00000228827 IFIH1Q9BYX4 1025 aaKnown RBP16.14■□□□□ 0.17
GPN3-201ENST00000228827 ZNF302Q9NR11 478 aa16.14■□□□□ 0.17
GPN3-201ENST00000228827 TBC1D22BQ9NU19 505 aa16.14■□□□□ 0.17
GPN3-201ENST00000228827 TCEAL9Q9UHQ7 104 aa16.14■□□□□ 0.17
GPN3-201ENST00000228827 KCNJ14Q9UNX9 436 aa16.14■□□□□ 0.17
GPN3-201ENST00000228827 IGKV6D-21A0A0A0MT36 114 aa16.13■□□□□ 0.17
GPN3-201ENST00000228827 DLL1O00548 723 aa16.13■□□□□ 0.17
GPN3-201ENST00000228827 EDIL3O43854 480 aa16.13■□□□□ 0.17
GPN3-201ENST00000228827 PFKFB2O60825 505 aa16.13■□□□□ 0.17
GPN3-201ENST00000228827 CDKL5O76039 1030 aa16.13■□□□□ 0.17
GPN3-201ENST00000228827 MGAT3Q09327 533 aa16.13■□□□□ 0.17
GPN3-201ENST00000228827 TMEM62Q0P6H9 643 aa16.13■□□□□ 0.17
GPN3-201ENST00000228827 PDXDC2PQ6P474 469 aa16.13■□□□□ 0.17
GPN3-201ENST00000228827 RPAINQ86UA6 219 aa16.13■□□□□ 0.17
GPN3-201ENST00000228827 BLIDQ8IZY5 108 aa16.13■□□□□ 0.17
GPN3-201ENST00000228827 TNPO1Q92973 898 aaKnown RBP16.13■□□□□ 0.17
GPN3-201ENST00000228827 LENG9Q96B70 501 aa16.13■□□□□ 0.17
GPN3-201ENST00000228827 RAD9AQ99638 391 aa16.13■□□□□ 0.17
GPN3-201ENST00000228827 CDY2AQ9Y6F7 541 aa16.13■□□□□ 0.17
GPN3-201ENST00000228827 TRIP12Q14669 1992 aaPredicted RBP16.12■□□□□ 0.17
GPN3-201ENST00000228827 UPP2O95045 317 aa16.12■□□□□ 0.17
GPN3-201ENST00000228827 MRPS6P82932 125 aaKnown RBP16.12■□□□□ 0.17
GPN3-201ENST00000228827 MKRN4PQ13434 485 aaPredicted RBP16.12■□□□□ 0.17
GPN3-201ENST00000228827 LPIN1Q14693 890 aa16.12■□□□□ 0.17
GPN3-201ENST00000228827 CKAP2LQ8IYA6 745 aa16.12■□□□□ 0.17
GPN3-201ENST00000228827 NECAB1Q8N987 351 aa16.12■□□□□ 0.17
GPN3-201ENST00000228827 ATP8B4Q8TF62 1192 aa16.12■□□□□ 0.17
GPN3-201ENST00000228827 GJA10Q969M2 543 aa16.12■□□□□ 0.17
GPN3-201ENST00000228827 PRDM6Q9NQX0 595 aa16.12■□□□□ 0.17
GPN3-201ENST00000228827 MTUS1Q9ULD2 1270 aa16.12■□□□□ 0.17
GPN3-201ENST00000228827 SAMM50Q9Y512 469 aa16.12■□□□□ 0.17
GPN3-201ENST00000228827 EYSQ5T1H1 3165 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms