RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 FAM196BA6NMK8 535 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 PALMO75781 387 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 FGFR2P21802 821 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 TM4SF1P30408 202 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 BLIDQ8IZY5 108 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 FBXL16Q8N461 479 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 SLC44A5Q8NCS7 719 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 AGBL3Q8NEM8 1001 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 EPB41L4AQ9HCS5 686 aaPredicted RBP12.56□□□□□ -0.4
CCND1-201ENST00000227507 TBC1D7Q9P0N9 293 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 HERC5Q9UII4 1024 aaKnown RBP12.56□□□□□ -0.4
CCND1-201ENST00000227507 CCPG1Q9ULG6 757 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 LRRC53A6NM62 1247 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 ENO4A6NNW6 628 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 SMIM22K7EJ46 135 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 GCFC2P16383 781 aaKnown RBP12.56□□□□□ -0.4
CCND1-201ENST00000227507 GMPSP49915 693 aaPredicted RBP12.56□□□□□ -0.4
CCND1-201ENST00000227507 SMTNP53814 917 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 MAGOHP61326 146 aaKnown RBP12.56□□□□□ -0.4
CCND1-201ENST00000227507 KCTD1Q719H9 257 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 SYCP3Q8IZU3 236 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 MMGT1Q8N4V1 131 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 MGARPQ8TDB4 240 aa12.56□□□□□ -0.4
CCND1-201ENST00000227507 MAGOHBQ96A72 148 aaKnown RBP12.56□□□□□ -0.4
CCND1-201ENST00000227507 ZNF233A6NK53 670 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 LRRC41Q15345 812 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 GALNT17Q6IS24 598 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 RUFY4Q6ZNE9 571 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 MCF2L2Q86YR7 1114 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 CCDC50Q8IVM0 306 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 C2orf69Q8N8R5 385 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 CCDC63Q8NA47 563 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 HVCN1Q96D96 273 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 CCDC97Q96F63 343 aaPredicted RBP12.55□□□□□ -0.4
CCND1-201ENST00000227507 MXD3Q9BW11 206 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 VCPKMTQ9H867 229 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 FAM208AQ9UK61 1670 aaKnown RBP12.55□□□□□ -0.4
CCND1-201ENST00000227507 KIF3CO14782 793 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 FAM107AO95990 144 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 FCER1AP12319 257 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 BRDTQ58F21 947 aaPredicted RBP12.55□□□□□ -0.4
CCND1-201ENST00000227507 TRIM68Q6AZZ1 485 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 MDM1Q8TC05 714 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 P2RX5Q93086 422 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 DNAJC7Q99615 494 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 SH3GL2Q99962 352 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 SLC5A4Q9NY91 659 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 SERPINA10Q9UK55 444 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 ZBTB21Q9ULJ3 1066 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 STK36Q9NRP7 1315 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 SLC8A1P32418 973 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 TXKP42681 527 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 IRX1P78414 480 aaPredicted RBP12.55□□□□□ -0.4
CCND1-201ENST00000227507 RPS6KA1Q15418 735 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 ANKRD40Q6AI12 368 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 ANKRD35Q8N283 1001 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 LRRC45Q96CN5 670 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 SPAG5Q96R06 1193 aa12.55□□□□□ -0.4
CCND1-201ENST00000227507 HMGB1P1B2RPK0 211 aaPredicted RBP12.54□□□□□ -0.4
CCND1-201ENST00000227507 TRAF5O00463 557 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 USP17L2Q6R6M4 530 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 MTA3Q9BTC8 594 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 SAMD15Q9P1V8 674 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 ADAMTS1Q9UHI8 967 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 ATP8A1Q9Y2Q0 1164 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 WDR19Q8NEZ3 1342 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 FSBPO95073 299 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 POLR2MP0CAP2 368 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 STAT2P52630 851 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 POLR2FP61218 127 aaKnown RBP12.54□□□□□ -0.4
CCND1-201ENST00000227507 CCNA1P78396 465 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 RASA3Q14644 834 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 SLC9C1Q4G0N8 1177 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 TCERG1LQ5VWI1 586 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 TXNRD3Q86VQ6 643 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 ELOA2Q8IYF1 753 aaPredicted RBP12.54□□□□□ -0.4
CCND1-201ENST00000227507 ADSSL1Q8N142 457 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 CCDC155Q8N6L0 562 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 TBC1D5Q92609 795 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 FAM167BQ9BTA0 163 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 ABT1Q9ULW3 272 aaKnown RBP12.54□□□□□ -0.4
CCND1-201ENST00000227507 NMT2O60551 498 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 ENTPD3O75355 529 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 C12orf60Q5U649 245 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 SPATA20Q8TB22 786 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 HACL1Q9UJ83 578 aa12.54□□□□□ -0.4
CCND1-201ENST00000227507 TPX2Q9ULW0 747 aaKnown RBP12.54□□□□□ -0.4
CCND1-201ENST00000227507 CAND2O75155 1236 aa12.53□□□□□ -0.4
CCND1-201ENST00000227507 OSBPP22059 807 aa12.53□□□□□ -0.4
CCND1-201ENST00000227507 CCDC25Q86WR0 208 aa12.53□□□□□ -0.4
CCND1-201ENST00000227507 SEC16BQ96JE7 1060 aa12.53□□□□□ -0.4
CCND1-201ENST00000227507 DHX9Q08211 1270 aaKnown RBP12.53□□□□□ -0.4
CCND1-201ENST00000227507 SEPT2Q15019 361 aa12.53□□□□□ -0.4
CCND1-201ENST00000227507 CDC42EP5Q6NZY7 148 aa12.53□□□□□ -0.4
CCND1-201ENST00000227507 DAAM2Q86T65 1068 aa12.53□□□□□ -0.4
CCND1-201ENST00000227507 FAM160B2Q86V87 743 aa12.53□□□□□ -0.4
CCND1-201ENST00000227507 NCAPG2Q86XI2 1143 aa12.53□□□□□ -0.4
CCND1-201ENST00000227507 DNAAF5Q86Y56 855 aa12.53□□□□□ -0.4
CCND1-201ENST00000227507 DDX47Q9H0S4 455 aaKnown RBP12.53□□□□□ -0.4
CCND1-201ENST00000227507 THAP9Q9H5L6 903 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms