RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 IRX1P78414 480 aaPredicted RBP15.42■□□□□ 0.06
SF1-201ENST00000227503 SLC44A5Q8NCS7 719 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 ARMC2Q8NEN0 867 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 KCNV2Q8TDN2 545 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 ERGIC2Q96RQ1 377 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 SELENOSQ9BQE4 189 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 NDST4Q9H3R1 872 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 TSPY3P0CV98 308 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 TSPY8P0CW00 308 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 ITGA4P13612 1032 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 CCNE1P24864 410 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 IFNAR2P48551 515 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 GRIK5Q16478 980 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 SLC51AQ86UW1 340 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 SPDYE1Q8NFV5 336 aaPredicted RBP15.42■□□□□ 0.06
SF1-201ENST00000227503 DHTKD1Q96HY7 919 aaPredicted RBP15.42■□□□□ 0.06
SF1-201ENST00000227503 TMEM47Q9BQJ4 181 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 ABCF3Q9NUQ8 709 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 C15orf41Q9Y2V0 281 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 CD2APQ9Y5K6 639 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 CCT8L1PA6NM43 557 aa15.41■□□□□ 0.06
SF1-201ENST00000227503 PLCG1P19174 1290 aa15.41■□□□□ 0.06
SF1-201ENST00000227503 GLIS3Q8NEA6 775 aa15.41■□□□□ 0.06
SF1-201ENST00000227503 BAP1Q92560 729 aa15.41■□□□□ 0.06
SF1-201ENST00000227503 AMACRQ9UHK6 382 aa15.41■□□□□ 0.06
SF1-201ENST00000227503 TLDC2A0PJX2 215 aa15.41■□□□□ 0.06
SF1-201ENST00000227503 CEP104O60308 925 aa15.41■□□□□ 0.06
SF1-201ENST00000227503 LDHBP07195 334 aaKnown RBP15.41■□□□□ 0.06
SF1-201ENST00000227503 DIXDC1Q155Q3 683 aa15.41■□□□□ 0.06
SF1-201ENST00000227503 LACTB2Q53H82 288 aaPredicted RBP15.41■□□□□ 0.06
SF1-201ENST00000227503 UBAP2Q5T6F2 1119 aaKnown RBP15.41■□□□□ 0.06
SF1-201ENST00000227503 USP38Q8NB14 1042 aa15.41■□□□□ 0.06
SF1-201ENST00000227503 KIAA0895Q8NCT3 520 aa15.41■□□□□ 0.06
SF1-201ENST00000227503 ELAC2Q9BQ52 826 aaKnown RBP15.41■□□□□ 0.06
SF1-201ENST00000227503 COL24A1Q17RW2 1714 aa15.41■□□□□ 0.06
SF1-201ENST00000227503 DNAJC8O75937 253 aaPredicted RBP15.4■□□□□ 0.06
SF1-201ENST00000227503 CDK17Q00537 523 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 MAP2K1Q02750 393 aaPredicted RBP15.4■□□□□ 0.06
SF1-201ENST00000227503 VWA3BQ502W6 1294 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 MAGEC3Q8TD91 643 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 TBC1D5Q92609 795 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 ZMYND12Q9H0C1 365 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 CUEDC2Q9H467 287 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 ARHGEF10LQ9HCE6 1279 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 STK38LQ9Y2H1 464 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 C5orf60A6NFR6 353 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 TLR2O60603 784 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 CAND2O75155 1236 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 SHBGP04278 402 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 GOLGA8HP0CJ92 632 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 RASA1P20936 1047 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 PPP4CP60510 307 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 LRRC41Q15345 812 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 ZKSCAN8Q15776 578 aaPredicted RBP15.4■□□□□ 0.06
SF1-201ENST00000227503 TXNRD1Q16881 649 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 HGSNATQ68CP4 663 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 CAPRIN2Q6IMN6 1127 aaKnown RBP15.4■□□□□ 0.06
SF1-201ENST00000227503 ADAT2Q7Z6V5 191 aaKnown RBP15.4■□□□□ 0.06
SF1-201ENST00000227503 CABP7Q86V35 215 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 WDR66Q8TBY9 1149 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 AK8Q96MA6 479 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 SPAG5Q96R06 1193 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 TRIM9Q9C026 710 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 MAGEF1Q9HAY2 307 aa15.4■□□□□ 0.06
SF1-201ENST00000227503 A0A1W2PQJ5 194 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 COPB2P35606 906 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 DHX9Q08211 1270 aaKnown RBP15.39■□□□□ 0.05
SF1-201ENST00000227503 ARMC3Q5W041 872 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 LRRC34Q8IZ02 419 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 ZNF444Q8N0Y2 327 aaPredicted RBP15.39■□□□□ 0.05
SF1-201ENST00000227503 CCDC197Q8NCU1 140 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 TGFBRAP1Q8WUH2 860 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 LZTS2Q9BRK4 669 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 ISCUQ9H1K1 167 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 CPVLQ9H3G5 476 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 ADAMTS1Q9UHI8 967 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 STX8Q9UNK0 236 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 ATP8A1Q9Y2Q0 1164 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 GRID2IPA4D2P6 1211 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 KLRF2D3W0D1 207 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 KIF4AO95239 1232 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 OR52Z1P0C646 297 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 CHN1P15882 459 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 IFFO1Q0D2I5 559 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 KIAA0753Q2KHM9 967 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 ASTE1Q2TB18 679 aaPredicted RBP15.39■□□□□ 0.05
SF1-201ENST00000227503 CDCA2Q69YH5 1023 aaPredicted RBP15.39■□□□□ 0.05
SF1-201ENST00000227503 TPTE2Q6XPS3 522 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 PTF1AQ7RTS3 328 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 DYMQ7RTS9 669 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 ZSCAN29Q8IWY8 852 aaPredicted RBP15.39■□□□□ 0.05
SF1-201ENST00000227503 MAB21L3Q8N8X9 362 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 CHMP6Q96FZ7 201 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 XPO6Q96QU8 1125 aaKnown RBP15.39■□□□□ 0.05
SF1-201ENST00000227503 C7orf25Q9BPX7 421 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 SPZ1Q9BXG8 430 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 EBF2Q9HAK2 575 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 SPATS2LQ9NUQ6 558 aaKnown RBP15.39■□□□□ 0.05
SF1-201ENST00000227503 TRIM33Q9UPN9 1127 aa15.39■□□□□ 0.05
SF1-201ENST00000227503 A0A087X0T9 212 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms