RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 FBXL13Q8NEE6 735 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 PIGBQ92521 554 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 DTNBO60941 627 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 MSH2P43246 934 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 CTTNQ14247 550 aaKnown RBP11.37□□□□□ -0.59
TRPS1-201ENST00000220888 LCORLQ8N3X6 602 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 DHTKD1Q96HY7 919 aaPredicted RBP11.37□□□□□ -0.59
TRPS1-201ENST00000220888 CLIC6Q96NY7 704 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 USP28Q96RU2 1077 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 TUBGCP2Q9BSJ2 902 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 HAUS4Q9H6D7 363 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 FKBP3Q00688 224 aaKnown RBP11.37□□□□□ -0.59
TRPS1-201ENST00000220888 DRP2Q13474 957 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 MXD4Q14582 209 aaPredicted RBP11.37□□□□□ -0.59
TRPS1-201ENST00000220888 LRRC43Q8N309 656 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 GDAQ9Y2T3 454 aa11.37□□□□□ -0.59
TRPS1-201ENST00000220888 KIF24Q5T7B8 1368 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 GOLGA8IPA6NC78 632 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 GOLGA8JA6NMD2 632 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 ALDH1A1P00352 501 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 RSBN1LQ6PCB5 846 aaPredicted RBP11.36□□□□□ -0.59
TRPS1-201ENST00000220888 KSR1Q8IVT5 923 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 RAB42Q8N4Z0 105 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 ZBTB18Q99592 522 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 ATP7AQ04656 1500 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 SERPINB6P35237 376 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 ADD2P35612 726 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 ST8SIA6P61647 398 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 PTH1RQ03431 593 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 EHHADHQ08426 723 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 AP3B2Q13367 1082 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 SEPT2Q15019 361 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 NKX1-1Q15270 411 aaPredicted RBP11.36□□□□□ -0.59
TRPS1-201ENST00000220888 ZMYM1Q5SVZ6 1142 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 EXT2Q93063 718 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 C2orf40Q9H1Z8 148 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 HACL1Q9UJ83 578 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 PYGLP06737 847 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 PLA2G4BP0C869 781 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 WASHC5Q12768 1159 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 TEX2Q8IWB9 1127 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 CCHCR1Q8TD31 782 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 SPATA33Q96N06 139 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 ZNF302Q9NR11 478 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 EMILIN3Q9NT22 766 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 GCNT4Q9P109 453 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 STK38LQ9Y2H1 464 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 A0A1B0GUA9 196 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 TRAPPC3O43617 180 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 PDIA3P30101 505 aaKnown RBP11.36□□□□□ -0.59
TRPS1-201ENST00000220888 R3HDM1Q15032 1099 aaKnown RBP11.36□□□□□ -0.59
TRPS1-201ENST00000220888 TOGARAM2Q6ZUX3 1019 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 TADA2BQ86TJ2 420 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 TEKT4Q8WW24 435 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 P2RX5Q93086 422 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 DDX50Q9BQ39 737 aaKnown RBP11.36□□□□□ -0.59
TRPS1-201ENST00000220888 FSD1LQ9BXM9 530 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 TBC1D22BQ9NU19 505 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 EPS15L1Q9UBC2 864 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 NARFQ9UHQ1 456 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 SNX2O60749 519 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 APOEP02649 317 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 OCM2P0CE71 109 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 OCMP0CE72 109 aaPredicted RBP11.36□□□□□ -0.59
TRPS1-201ENST00000220888 RALAP11233 206 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 RASSF7Q02833 373 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 NSUN2Q08J23 767 aaKnown RBP eCLIP11.36□□□□□ -0.59
TRPS1-201ENST00000220888 SNX1Q13596 522 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 SUSD4Q5VX71 490 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 APOA5Q6Q788 366 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 ACAD9Q9H845 621 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 SFMBT1Q9UHJ3 866 aa11.36□□□□□ -0.59
TRPS1-201ENST00000220888 PRKAB2O43741 272 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 COPB1P53618 953 aaKnown RBP11.35□□□□□ -0.59
TRPS1-201ENST00000220888 KRT76Q01546 638 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 ADCY1Q08828 1119 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 DDX53Q86TM3 631 aaKnown RBP11.35□□□□□ -0.59
TRPS1-201ENST00000220888 ARHGEF1Q92888 912 aaKnown RBP11.35□□□□□ -0.59
TRPS1-201ENST00000220888 GSDMAQ96QA5 445 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 ATG3Q9NT62 314 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 SPECC1L-ADORA2AF8WAN1 911 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 CYP2E1P05181 493 aaPredicted RBP11.35□□□□□ -0.59
TRPS1-201ENST00000220888 NT5C2P49902 561 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 ANKRD13CQ8N6S4 541 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 PBXIP1Q96AQ6 731 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 EEF2KMTQ96G04 330 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 SPON2Q9BUD6 331 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 MAGEB5Q9BZ81 275 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 KIAA1586Q9HCI6 787 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 SUFUQ9UMX1 484 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 EFCAB8A8MWE9 144 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 TAC1P20366 129 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 ATICP31939 592 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 MAN2A1Q16706 1144 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 BTBD8Q5XKL5 378 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 RHPN2Q8IUC4 686 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 PPWD1Q96BP3 646 aaKnown RBP11.35□□□□□ -0.59
TRPS1-201ENST00000220888 GDAP1L1Q96MZ0 367 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 SPZ1Q9BXG8 430 aa11.35□□□□□ -0.59
TRPS1-201ENST00000220888 KRT82Q9NSB4 513 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms