RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 TMTC1Q8IUR5 882 aa14.88□□□□□ -0.03
GABPB1-201ENST00000220429 ARFGAP2Q8N6H7 521 aa14.88□□□□□ -0.03
GABPB1-201ENST00000220429 OPTNQ96CV9 577 aa14.88□□□□□ -0.03
GABPB1-201ENST00000220429 MOV10L1Q9BXT6 1211 aaKnown RBP14.88□□□□□ -0.03
GABPB1-201ENST00000220429 PREBQ9HCU5 417 aa14.88□□□□□ -0.03
GABPB1-201ENST00000220429 TCP11L1Q9NUJ3 509 aa14.88□□□□□ -0.03
GABPB1-201ENST00000220429 HMGB1P1B2RPK0 211 aaPredicted RBP14.88□□□□□ -0.03
GABPB1-201ENST00000220429 BBOX1O75936 387 aa14.88□□□□□ -0.03
GABPB1-201ENST00000220429 GSTA1P08263 222 aa14.88□□□□□ -0.03
GABPB1-201ENST00000220429 RASA1P20936 1047 aa14.88□□□□□ -0.03
GABPB1-201ENST00000220429 HOXA10P31260 410 aaPredicted RBP14.88□□□□□ -0.03
GABPB1-201ENST00000220429 FMR1Q06787 632 aaKnown RBP eCLIP14.88□□□□□ -0.03
GABPB1-201ENST00000220429 SGSM1Q2NKQ1 1148 aa14.88□□□□□ -0.03
GABPB1-201ENST00000220429 ANO7Q6IWH7 933 aa14.88□□□□□ -0.03
GABPB1-201ENST00000220429 IQCKQ8N0W5 287 aa14.88□□□□□ -0.03
GABPB1-201ENST00000220429 TBC1D16Q8TBP0 767 aa14.88□□□□□ -0.03
GABPB1-201ENST00000220429 HDAC7Q8WUI4 952 aa14.88□□□□□ -0.03
GABPB1-201ENST00000220429 GPKOWQ92917 476 aaPredicted RBP eCLIP14.88□□□□□ -0.03
GABPB1-201ENST00000220429 JAKMIP2Q96AA8 810 aa14.88□□□□□ -0.03
GABPB1-201ENST00000220429 DMGDHQ9UI17 866 aaKnown RBP14.88□□□□□ -0.03
GABPB1-201ENST00000220429 MAD2L2Q9UI95 211 aa14.88□□□□□ -0.03
GABPB1-201ENST00000220429 LRRC37AA6NMS7 1700 aa14.87□□□□□ -0.03
GABPB1-201ENST00000220429 PDE2AO00408 941 aaPredicted RBP14.87□□□□□ -0.03
GABPB1-201ENST00000220429 POLRMTO00411 1230 aaKnown RBP14.87□□□□□ -0.03
GABPB1-201ENST00000220429 TRIM68Q6AZZ1 485 aa14.87□□□□□ -0.03
GABPB1-201ENST00000220429 LCA5Q86VQ0 697 aa14.87□□□□□ -0.03
GABPB1-201ENST00000220429 ZNF444Q8N0Y2 327 aaPredicted RBP14.87□□□□□ -0.03
GABPB1-201ENST00000220429 ATXN10Q9UBB4 475 aa14.87□□□□□ -0.03
GABPB1-201ENST00000220429 SNED1Q8TER0 1413 aa14.87□□□□□ -0.03
GABPB1-201ENST00000220429 FOCADQ5VW36 1801 aa14.87□□□□□ -0.03
GABPB1-201ENST00000220429 A0A1B0GTH6 734 aa14.87□□□□□ -0.03
GABPB1-201ENST00000220429 CCT8L1PA6NM43 557 aa14.87□□□□□ -0.03
GABPB1-201ENST00000220429 TRIM37O94972 964 aa14.87□□□□□ -0.03
GABPB1-201ENST00000220429 ATP2A2P16615 1042 aaKnown RBP14.87□□□□□ -0.03
GABPB1-201ENST00000220429 GALNT17Q6IS24 598 aa14.87□□□□□ -0.03
GABPB1-201ENST00000220429 ERICH1Q86X53 443 aa14.87□□□□□ -0.03
GABPB1-201ENST00000220429 TRIML1Q8N9V2 468 aa14.87□□□□□ -0.03
GABPB1-201ENST00000220429 MLKLQ8NB16 471 aa14.87□□□□□ -0.03
GABPB1-201ENST00000220429 C1orf131Q8NDD1 294 aaKnown RBP14.87□□□□□ -0.03
GABPB1-201ENST00000220429 AGAP3Q96P47 875 aa14.87□□□□□ -0.03
GABPB1-201ENST00000220429 SYT15Q9BQS2 421 aa14.87□□□□□ -0.03
GABPB1-201ENST00000220429 SPATA7Q9P0W8 599 aa14.87□□□□□ -0.03
GABPB1-201ENST00000220429 ANKRD31Q8N7Z5 1873 aa14.87□□□□□ -0.03
GABPB1-201ENST00000220429 FAM205AQ6ZU69 1335 aa14.87□□□□□ -0.03
GABPB1-201ENST00000220429 TEX33O43247 280 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 FECHP22830 423 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 HPDP32754 393 aaPredicted RBP14.86□□□□□ -0.03
GABPB1-201ENST00000220429 TRAPPC10P48553 1259 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 PABPC4Q13310 644 aaKnown RBP eCLIP14.86□□□□□ -0.032e-11■■□□□ 12.3
GABPB1-201ENST00000220429 EZH2Q15910 746 aaKnown RBP14.86□□□□□ -0.03
GABPB1-201ENST00000220429 MFSD14BQ5SR56 506 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 TYW1BQ6NUM6 668 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 SH3RF1Q7Z6J0 888 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 CNGA4Q8IV77 575 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 LMNTD2Q8IXW0 634 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 MMGT1Q8N4V1 131 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 CCDC51Q96ER9 411 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 CCDC43Q96MW1 224 aaKnown RBP14.86□□□□□ -0.03
GABPB1-201ENST00000220429 MED15Q96RN5 788 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 TMEM47Q9BQJ4 181 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 OCEL1Q9H607 264 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 QTRT2Q9H974 415 aaKnown RBP14.86□□□□□ -0.03
GABPB1-201ENST00000220429 KCNMB3Q9NPA1 279 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 SLC12A4Q9UP95 1085 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 PSMC4P43686 418 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 RHBDL3P58872 404 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 CD302Q8IX05 232 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 SPICE1Q8N0Z3 855 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 CCDC155Q8N6L0 562 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 DYDC1Q8WWB3 177 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 PAGE5Q96GU1 130 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 SLF1Q9BQI6 1058 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 LRRC1Q9BTT6 524 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 TRIM10Q9UDY6 481 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 KLRG2A4D1S0 409 aaPredicted RBP14.86□□□□□ -0.03
GABPB1-201ENST00000220429 CYTH3O43739 400 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 PENKP01210 267 aaPredicted RBP14.86□□□□□ -0.03
GABPB1-201ENST00000220429 CYP11B2P19099 503 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 CASP1P29466 404 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 CASP14P31944 242 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 AFMP43652 599 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 BLIDQ8IZY5 108 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 CRAMP1Q96RY5 1269 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 STX8Q9UNK0 236 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 MTMR7Q9Y216 660 aa14.86□□□□□ -0.03
GABPB1-201ENST00000220429 FLT1P17948 1338 aa14.85□□□□□ -0.03
GABPB1-201ENST00000220429 E2F6O75461 281 aa14.85□□□□□ -0.03
GABPB1-201ENST00000220429 CALML3P27482 149 aa14.85□□□□□ -0.03
GABPB1-201ENST00000220429 MCM7P33993 719 aa14.85□□□□□ -0.03
GABPB1-201ENST00000220429 CDK8P49336 464 aa14.85□□□□□ -0.03
GABPB1-201ENST00000220429 ERVK-24P63145 666 aa14.85□□□□□ -0.03
GABPB1-201ENST00000220429 CDC37Q16543 378 aaPredicted RBP14.85□□□□□ -0.03
GABPB1-201ENST00000220429 IL17AQ16552 155 aa14.85□□□□□ -0.03
GABPB1-201ENST00000220429 C16orf86Q6ZW13 317 aa14.85□□□□□ -0.03
GABPB1-201ENST00000220429 TRMT44Q8IYL2 757 aaKnown RBP14.85□□□□□ -0.03
GABPB1-201ENST00000220429 ENOX1Q8TC92 643 aaKnown RBP14.85□□□□□ -0.03
GABPB1-201ENST00000220429 NOC3LQ8WTT2 800 aaKnown RBP14.85□□□□□ -0.03
GABPB1-201ENST00000220429 UNC45AQ9H3U1 944 aa14.85□□□□□ -0.03
GABPB1-201ENST00000220429 SH3GLB2Q9NR46 395 aa14.85□□□□□ -0.03
GABPB1-201ENST00000220429 DACH1Q9UI36 760 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms