RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 DONSONQ9NYP3 566 aa20.47■□□□□ 0.87
SMPD3-201ENST00000219334 FAM133AQ8N9E0 248 aa20.47■□□□□ 0.87
SMPD3-201ENST00000219334 CELF1Q92879 486 aaKnown RBP20.47■□□□□ 0.87
SMPD3-201ENST00000219334 RWDD2AQ9UIY3 292 aa20.47■□□□□ 0.87
SMPD3-201ENST00000219334 IGSF3O75054 1194 aa20.47■□□□□ 0.87
SMPD3-201ENST00000219334 DBN1Q16643 649 aa20.47■□□□□ 0.87
SMPD3-201ENST00000219334 MMEL1Q495T6 779 aa20.47■□□□□ 0.87
SMPD3-201ENST00000219334 VCX3AQ9NNX9 186 aa20.47■□□□□ 0.87
SMPD3-201ENST00000219334 CLDN3O15551 220 aa20.46■□□□□ 0.87
SMPD3-201ENST00000219334 OAS2P29728 719 aaKnown RBP20.46■□□□□ 0.87
SMPD3-201ENST00000219334 KRT76Q01546 638 aa20.46■□□□□ 0.87
SMPD3-201ENST00000219334 STAG1Q8WVM7 1258 aa20.46■□□□□ 0.87
SMPD3-201ENST00000219334 JRKLQ9Y4A0 524 aa20.46■□□□□ 0.87
SMPD3-201ENST00000219334 IRX4P78413 519 aa20.46■□□□□ 0.87
SMPD3-201ENST00000219334 GUCY2DQ02846 1103 aa20.46■□□□□ 0.87
SMPD3-201ENST00000219334 EN1Q05925 392 aaPredicted RBP20.46■□□□□ 0.87
SMPD3-201ENST00000219334 RNF219Q5W0B1 726 aaPredicted RBP20.46■□□□□ 0.87
SMPD3-201ENST00000219334 LRRC8AQ8IWT6 810 aa20.46■□□□□ 0.87
SMPD3-201ENST00000219334 CDK12Q9NYV4 1490 aaPredicted RBP20.46■□□□□ 0.87
SMPD3-201ENST00000219334 UTYO14607 1347 aa20.46■□□□□ 0.87
SMPD3-201ENST00000219334 PTCH1Q13635 1447 aa20.46■□□□□ 0.87
SMPD3-201ENST00000219334 GOLGA8KD6RF30 607 aa20.46■□□□□ 0.87
SMPD3-201ENST00000219334 IKBKBO14920 756 aa20.46■□□□□ 0.87
SMPD3-201ENST00000219334 KPNA2P52292 529 aaKnown RBP20.46■□□□□ 0.87
SMPD3-201ENST00000219334 GRAMD1CQ8IYS0 662 aa20.46■□□□□ 0.87
SMPD3-201ENST00000219334 HAUS8Q9BT25 410 aa20.46■□□□□ 0.87
SMPD3-201ENST00000219334 PCDHB6Q9Y5E3 794 aa20.46■□□□□ 0.87
SMPD3-201ENST00000219334 SAMD9LQ8IVG5 1584 aa20.46■□□□□ 0.87
SMPD3-201ENST00000219334 ABCB11O95342 1321 aa20.46■□□□□ 0.87
SMPD3-201ENST00000219334 LRRD1A4D1F6 860 aa20.46■□□□□ 0.87
SMPD3-201ENST00000219334 PLEKHA8P1O95397 391 aa20.46■□□□□ 0.87
SMPD3-201ENST00000219334 CYP2D6P10635 497 aa20.46■□□□□ 0.87
SMPD3-201ENST00000219334 RECQLP46063 649 aaPredicted RBP20.46■□□□□ 0.87
SMPD3-201ENST00000219334 LRRC8CQ8TDW0 803 aa20.46■□□□□ 0.87
SMPD3-201ENST00000219334 TMEM47Q9BQJ4 181 aa20.46■□□□□ 0.87
SMPD3-201ENST00000219334 DPYSL4O14531 572 aa20.45■□□□□ 0.86
SMPD3-201ENST00000219334 MYRIPQ8NFW9 859 aa20.45■□□□□ 0.86
SMPD3-201ENST00000219334 URGCPQ8TCY9 931 aa20.45■□□□□ 0.86
SMPD3-201ENST00000219334 FAM114A2Q9NRY5 505 aa20.45■□□□□ 0.86
SMPD3-201ENST00000219334 MAN1B1Q9UKM7 699 aa20.45■□□□□ 0.86
SMPD3-201ENST00000219334 DAAM1Q9Y4D1 1078 aa20.45■□□□□ 0.86
SMPD3-201ENST00000219334 COPB2P35606 906 aa20.45■□□□□ 0.86
SMPD3-201ENST00000219334 TMTC3Q6ZXV5 915 aa20.45■□□□□ 0.86
SMPD3-201ENST00000219334 GOLGA8QA0A0J9YX86 632 aa20.45■□□□□ 0.86
SMPD3-201ENST00000219334 GOLGA8OA6NCC3 632 aa20.45■□□□□ 0.86
SMPD3-201ENST00000219334 GOLGA8NF8WBI6 632 aa20.45■□□□□ 0.86
SMPD3-201ENST00000219334 FCER1AP12319 257 aa20.45■□□□□ 0.86
SMPD3-201ENST00000219334 ZNF18P17022 549 aa20.45■□□□□ 0.86
SMPD3-201ENST00000219334 PPARGP37231 505 aaPredicted RBP20.45■□□□□ 0.86
SMPD3-201ENST00000219334 LRRC63Q05C16 580 aa20.45■□□□□ 0.86
SMPD3-201ENST00000219334 ERICH1Q86X53 443 aa20.45■□□□□ 0.86
SMPD3-201ENST00000219334 THAP9Q9H5L6 903 aa20.45■□□□□ 0.86
SMPD3-201ENST00000219334 TLK1Q9UKI8 766 aa20.45■□□□□ 0.86
SMPD3-201ENST00000219334 USH1CQ9Y6N9 552 aa20.45■□□□□ 0.86
SMPD3-201ENST00000219334 CLGNO14967 610 aa20.45■□□□□ 0.86
SMPD3-201ENST00000219334 PRELPP51888 382 aa20.45■□□□□ 0.86
SMPD3-201ENST00000219334 TSPY1Q01534 308 aa20.45■□□□□ 0.86
SMPD3-201ENST00000219334 HMGB1P1B2RPK0 211 aaPredicted RBP20.44■□□□□ 0.86
SMPD3-201ENST00000219334 BASP1P80723 227 aaKnown RBP20.44■□□□□ 0.86
SMPD3-201ENST00000219334 PKP1Q13835 747 aa20.44■□□□□ 0.86
SMPD3-201ENST00000219334 MMP19Q99542 508 aa20.44■□□□□ 0.86
SMPD3-201ENST00000219334 KIAA1586Q9HCI6 787 aa20.44■□□□□ 0.86
SMPD3-201ENST00000219334 MAGED2Q9UNF1 606 aaPredicted RBP20.44■□□□□ 0.86
SMPD3-201ENST00000219334 CDHR2Q9BYE9 1310 aa20.44■□□□□ 0.86
SMPD3-201ENST00000219334 ECEL1O95672 775 aa20.44■□□□□ 0.86
SMPD3-201ENST00000219334 ATXN8OSP0DMR3 200 aa20.44■□□□□ 0.86
SMPD3-201ENST00000219334 CYP19A1P11511 503 aaPredicted RBP20.44■□□□□ 0.86
SMPD3-201ENST00000219334 SNX1Q13596 522 aa20.44■□□□□ 0.86
SMPD3-201ENST00000219334 RCOR1Q9UKL0 485 aa20.44■□□□□ 0.86
SMPD3-201ENST00000219334 FAM196BA6NMK8 535 aa20.44■□□□□ 0.86
SMPD3-201ENST00000219334 STX1BP61266 288 aa20.44■□□□□ 0.86
SMPD3-201ENST00000219334 BZW1Q7L1Q6 419 aaKnown RBP20.44■□□□□ 0.86
SMPD3-201ENST00000219334 FASTKD5Q7L8L6 764 aaKnown RBP20.44■□□□□ 0.86
SMPD3-201ENST00000219334 NUDCD1Q96RS6 583 aa20.44■□□□□ 0.86
SMPD3-201ENST00000219334 MROH7-TTC4A0A0A0MT08 1334 aa20.44■□□□□ 0.86
SMPD3-201ENST00000219334 GCC2Q8IWJ2 1684 aa20.44■□□□□ 0.86
SMPD3-201ENST00000219334 HUS1O60921 280 aa20.44■□□□□ 0.86
SMPD3-201ENST00000219334 FDX1P10109 184 aa20.44■□□□□ 0.86
SMPD3-201ENST00000219334 RNF10Q8N5U6 811 aaKnown RBP20.44■□□□□ 0.86
SMPD3-201ENST00000219334 PSPC1Q8WXF1 523 aaKnown RBP20.44■□□□□ 0.86
SMPD3-201ENST00000219334 C10orf76Q5T2E6 689 aa20.43■□□□□ 0.86
SMPD3-201ENST00000219334 SP8Q8IXZ3 490 aa20.43■□□□□ 0.86
SMPD3-201ENST00000219334 PIGOQ8TEQ8 1089 aa20.43■□□□□ 0.86
SMPD3-201ENST00000219334 TSPOAP1O95153 1857 aa20.43■□□□□ 0.86
SMPD3-201ENST00000219334 KRT33BQ14525 404 aa20.43■□□□□ 0.86
SMPD3-201ENST00000219334 PRPF38AQ8NAV1 312 aaKnown RBP20.43■□□□□ 0.86
SMPD3-201ENST00000219334 CCHCR1Q8TD31 782 aa20.43■□□□□ 0.86
SMPD3-201ENST00000219334 HVCN1Q96D96 273 aa20.43■□□□□ 0.86
SMPD3-201ENST00000219334 HSPA6P17066 643 aa20.43■□□□□ 0.86
SMPD3-201ENST00000219334 GOLGA8FQ08AF8 430 aa20.43■□□□□ 0.86
SMPD3-201ENST00000219334 GOLGA8DPQ0D2H9 430 aa20.43■□□□□ 0.86
SMPD3-201ENST00000219334 PPME1Q9Y570 386 aa20.43■□□□□ 0.86
SMPD3-201ENST00000219334 RBL2Q08999 1139 aa20.43■□□□□ 0.86
SMPD3-201ENST00000219334 SDCCAG3Q96C92 435 aa20.43■□□□□ 0.86
SMPD3-201ENST00000219334 SPZ1Q9BXG8 430 aa20.43■□□□□ 0.86
SMPD3-201ENST00000219334 MAP3K4Q9Y6R4 1608 aa20.43■□□□□ 0.86
SMPD3-201ENST00000219334 DPCR1Q3MIW9 517 aa20.43■□□□□ 0.86
SMPD3-201ENST00000219334 CEP120Q8N960 986 aa20.43■□□□□ 0.86
SMPD3-201ENST00000219334 TTC25Q96NG3 672 aa20.43■□□□□ 0.86
SMPD3-201ENST00000219334 ZNF302Q9NR11 478 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms