RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 TTC17Q96AE7 1141 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 FAM49AQ9H0Q0 323 aaPredicted RBP14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 KANSL2Q9H9L4 492 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 HACD3Q9P035 362 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 ABCB11O95342 1321 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 USP17L15C9J2P7 530 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 USP17L13C9JLJ4 530 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 USP17L11C9JVI0 530 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 USP17L18D6R9N7 530 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 USP17L22D6RA61 530 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 USP17L17D6RBQ6 530 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 USP17L19D6RCP7 530 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 USP17L20D6RJB6 530 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 MCF2LO15068 1137 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 NVLO15381 856 aaKnown RBP14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 GGCXP38435 758 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 USP17L24Q0WX57 530 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 USP17L6PQ6QN14 398 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 TMC4Q7Z404 712 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 AGR3Q8TD06 166 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 KLHL29Q96CT2 875 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 DHTKD1Q96HY7 919 aaPredicted RBP14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 CDCA7Q9BWT1 371 aaPredicted RBP14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 PPP6R3Q5H9R7 873 aaPredicted RBP14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 FAM160B1Q5W0V3 765 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 NR1D1P20393 614 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 MIS18BP1Q6P0N0 1132 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 NDST4Q9H3R1 872 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 SCAF8Q9UPN6 1271 aaKnown RBP14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 SRPRBQ9Y5M8 271 aaKnown RBP14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 E9PMD0 336 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 MT-ND3P03897 115 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 TMED1Q13445 227 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 FGD4Q96M96 766 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 ZMYND12Q9H0C1 365 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 CACYBPQ9HB71 228 aaKnown RBP14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 ADGBQ8N7X0 1667 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 APOEP02649 317 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 SERPING1P05155 500 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 TAF11Q15544 211 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 MDH1BQ5I0G3 518 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 BEND6Q5SZJ8 279 aaPredicted RBP14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 SH2D3AQ9BRG2 576 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 KLHL11Q9NVR0 708 aa14.69□□□□□ -0.06
TGFBR3-201ENST00000212355 BMP3P12645 472 aa14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 EEF1B2P24534 225 aaKnown RBP14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 N4BP2L2Q92802 583 aaPredicted RBP14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 PDHA1P08559 390 aa14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 PRCPP42785 496 aa14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 PHEXP78562 749 aa14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 THNSL1Q8IYQ7 743 aa14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 CDKL2Q92772 493 aa14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 RNASELQ05823 741 aaKnown RBP14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 ASPRV1Q53RT3 343 aa14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 HIBCHQ6NVY1 386 aaPredicted RBP14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 CDC27P30260 824 aa14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 HACE1Q8IYU2 909 aa14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 CNKSR1Q969H4 720 aa14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 ALG13Q9NP73 1137 aaKnown RBP14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 SAYSD1Q9NPB0 183 aa14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 KRT82Q9NSB4 513 aa14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 TEX33O43247 280 aa14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 LPXNO60711 386 aa14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 CCND2P30279 289 aa14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 NUGGCQ68CJ6 796 aa14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 ANGPTL8Q6UXH0 198 aa14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 ZNF341Q9BYN7 854 aa14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 RCOR1Q9UKL0 485 aa14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 ABCC2Q92887 1545 aa14.68□□□□□ -0.06
TGFBR3-201ENST00000212355 ZNF185O15231 689 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 SPAG7O75391 227 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 PNMA6AP0CW24 399 aaPredicted RBP14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 POLR2BP30876 1174 aaKnown RBP14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 MTF1Q14872 753 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 NECTIN1Q15223 517 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 SLC27A3Q5K4L6 730 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 PCGF5Q86SE9 256 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 SLC7A3Q8WY07 619 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 PRDM5Q9NQX1 630 aaPredicted RBP14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 HEY1Q9Y5J3 304 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 SHANK2Q9UPX8 1470 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 GSTA4O15217 222 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 GCLMP48507 274 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 TTC30AQ86WT1 665 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 ATXN7L3BQ96GX2 97 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 LRRC53A6NM62 1247 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 CIAO1O76071 339 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 PRDX5P30044 214 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 TRMT2AQ8IZ69 625 aaKnown RBP14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 FMO2Q99518 471 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 PBRM1Q86U86 1689 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 INSRP06213 1382 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 KDELC2Q7Z4H8 507 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 PIGBQ92521 554 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 PARVGQ9HBI0 331 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 NPC1L1Q9UHC9 1359 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 RASGRF2O14827 1237 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 MFAP3LO75121 409 aa14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 ACTN3Q08043 901 aaPredicted RBP14.67□□□□□ -0.06
TGFBR3-201ENST00000212355 FAM83BQ5T0W9 1011 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms