RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 NAPAP54920 295 aa10.95□□□□□ -0.66
CLDN18-201ENST00000183605 ITIH4Q14624 930 aa10.95□□□□□ -0.66
CLDN18-201ENST00000183605 PUM3Q15397 648 aaKnown RBP10.95□□□□□ -0.66
CLDN18-201ENST00000183605 PDCD2Q16342 344 aaPredicted RBP10.95□□□□□ -0.66
CLDN18-201ENST00000183605 TMTC3Q6ZXV5 915 aa10.95□□□□□ -0.66
CLDN18-201ENST00000183605 H2AFVQ71UI9 128 aa10.95□□□□□ -0.66
CLDN18-201ENST00000183605 LBHD1Q9BQE6 289 aaPredicted RBP10.95□□□□□ -0.66
CLDN18-201ENST00000183605 FBXO3Q9UK99 471 aa10.95□□□□□ -0.66
CLDN18-201ENST00000183605 F8VZ95 297 aa10.94□□□□□ -0.66
CLDN18-201ENST00000183605 FERP16591 822 aa10.94□□□□□ -0.66
CLDN18-201ENST00000183605 COPS2P61201 443 aa10.94□□□□□ -0.66
CLDN18-201ENST00000183605 DR1Q01658 176 aa10.94□□□□□ -0.66
CLDN18-201ENST00000183605 SEMA3FQ13275 785 aa10.94□□□□□ -0.66
CLDN18-201ENST00000183605 LAMB3Q13751 1172 aa10.94□□□□□ -0.66
CLDN18-201ENST00000183605 UAP1Q16222 522 aaPredicted RBP10.94□□□□□ -0.66
CLDN18-201ENST00000183605 DCAF17Q5H9S7 520 aaPredicted RBP10.94□□□□□ -0.66
CLDN18-201ENST00000183605 C6orf118Q5T5N4 469 aa10.94□□□□□ -0.66
CLDN18-201ENST00000183605 MEI1Q5TIA1 1274 aa10.94□□□□□ -0.66
CLDN18-201ENST00000183605 MEX3CQ5U5Q3 659 aaKnown RBP10.94□□□□□ -0.66
CLDN18-201ENST00000183605 RASIP1Q5U651 963 aa10.94□□□□□ -0.66
CLDN18-201ENST00000183605 ZNF572Q7Z3I7 529 aaPredicted RBP10.94□□□□□ -0.66
CLDN18-201ENST00000183605 GBP5Q96PP8 586 aa10.94□□□□□ -0.66
CLDN18-201ENST00000183605 TMEM60Q9H2L4 133 aa10.94□□□□□ -0.66
CLDN18-201ENST00000183605 DBR1Q9UK59 544 aaKnown RBP10.94□□□□□ -0.66
CLDN18-201ENST00000183605 STX8Q9UNK0 236 aa10.94□□□□□ -0.66
CLDN18-201ENST00000183605 CHRNA2Q15822 529 aa10.94□□□□□ -0.66
CLDN18-201ENST00000183605 SLC18A3Q16572 532 aa10.94□□□□□ -0.66
CLDN18-201ENST00000183605 TXNRD1Q16881 649 aa10.94□□□□□ -0.66
CLDN18-201ENST00000183605 ALKBH5Q6P6C2 394 aaKnown RBP10.94□□□□□ -0.66
CLDN18-201ENST00000183605 TMEM154Q6P9G4 183 aa10.94□□□□□ -0.66
CLDN18-201ENST00000183605 TMC3Q7Z5M5 1100 aa10.94□□□□□ -0.66
CLDN18-201ENST00000183605 EBF2Q9HAK2 575 aa10.94□□□□□ -0.66
CLDN18-201ENST00000183605 DLGAP2Q9P1A6 1054 aa10.94□□□□□ -0.66
CLDN18-201ENST00000183605 THRAP3Q9Y2W1 955 aaKnown RBP10.94□□□□□ -0.66
CLDN18-201ENST00000183605 CETN3O15182 167 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 ATP4AP20648 1035 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 COPB2P35606 906 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 CALCOCO2Q13137 446 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 IL17AQ16552 155 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 MIIPQ5JXC2 388 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 ZNF449Q6P9G9 518 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 FAM47EQ6ZV65 393 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 CROCCP2Q86T23 111 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 THEMISQ8N1K5 641 aaPredicted RBP10.93□□□□□ -0.66
CLDN18-201ENST00000183605 C1orf131Q8NDD1 294 aaKnown RBP10.93□□□□□ -0.66
CLDN18-201ENST00000183605 ZNF570Q96NI8 536 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 NUDCD1Q96RS6 583 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 RAB34Q9BZG1 259 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 ZCWPW1Q9H0M4 648 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 CEP72Q9P209 647 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 AXIN2Q9Y2T1 843 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 F8W031 263 aaPredicted RBP10.93□□□□□ -0.66
CLDN18-201ENST00000183605 OR52Z1P0C646 297 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 IFI35P80217 286 aaPredicted RBP10.93□□□□□ -0.66
CLDN18-201ENST00000183605 RASGRF1Q13972 1273 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 SLC29A2Q14542 456 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 MYOCDQ8IZQ8 938 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 SYCE1Q8N0S2 351 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 SRBD1Q8N5C6 995 aaKnown RBP10.93□□□□□ -0.66
CLDN18-201ENST00000183605 METTL13Q8N6R0 699 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 INPP4AQ96PE3 977 aaPredicted RBP10.93□□□□□ -0.66
CLDN18-201ENST00000183605 UIMC1Q96RL1 719 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 NAP1L3Q99457 506 aaPredicted RBP10.93□□□□□ -0.66
CLDN18-201ENST00000183605 NEUROG2Q9H2A3 272 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 SCOCQ9UIL1 159 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 PXDNQ92626 1479 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 USP17L12C9JPN9 530 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 USP17L21D6R901 530 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 IRF6O14896 467 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 ASAP2O43150 1006 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 PJA2O43164 708 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 NMT2O60551 498 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 SMNDC1O75940 238 aaKnown RBP eCLIP10.93□□□□□ -0.66
CLDN18-201ENST00000183605 SHBGP04278 402 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 KRT16P08779 473 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 ALDH3A1P30838 453 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 ZNF131P52739 623 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 KLC1Q07866 573 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 PPFIBP2Q8ND30 876 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 CUEDC2Q9H467 287 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 MKNK2Q9HBH9 465 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 TRIM33Q9UPN9 1127 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 TBX22Q9Y458 520 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 MYH15Q9Y2K3 1946 aa10.93□□□□□ -0.66
CLDN18-201ENST00000183605 ALS2Q96Q42 1657 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 IGHMBP2P38935 993 aaKnown RBP10.92□□□□□ -0.66
CLDN18-201ENST00000183605 BCAMP50895 628 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 RIPK1Q13546 671 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 LLGL1Q15334 1064 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 SEPT7Q16181 437 aaKnown RBP10.92□□□□□ -0.66
CLDN18-201ENST00000183605 HLFQ16534 295 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 KRT79Q5XKE5 535 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 CCDC105Q8IYK2 499 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 SLITRK6Q9H5Y7 841 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 COL4A3BPQ9Y5P4 624 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 C5orf60A6NFR6 353 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 FGFR4P22455 802 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 USP11P51784 963 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 RPS6KA3P51812 740 aa10.92□□□□□ -0.66
CLDN18-201ENST00000183605 FKBP3Q00688 224 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms