RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 SLC12A3P55017 1021 aa12.49□□□□□ -0.41
GPATCH1-201ENST00000170564 BACE1P56817 501 aa12.49□□□□□ -0.41
GPATCH1-201ENST00000170564 LRRC31Q6UY01 552 aa12.49□□□□□ -0.41
GPATCH1-201ENST00000170564 GSPT2Q8IYD1 628 aaKnown RBP12.49□□□□□ -0.41
GPATCH1-201ENST00000170564 CRACR2AQ9BSW2 395 aa12.49□□□□□ -0.41
GPATCH1-201ENST00000170564 WRAP73Q9P2S5 460 aaPredicted RBP12.49□□□□□ -0.41
GPATCH1-201ENST00000170564 LIMA1Q9UHB6 759 aaKnown RBP12.49□□□□□ -0.41
GPATCH1-201ENST00000170564 CCPG1Q9ULG6 757 aa12.49□□□□□ -0.41
GPATCH1-201ENST00000170564 PCDHA2Q9Y5H9 948 aa12.49□□□□□ -0.41
GPATCH1-201ENST00000170564 ZBTB39O15060 712 aa12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 ARP10275 920 aa12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 ITGB5P18084 799 aa12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 CACNB1Q02641 598 aaPredicted RBP12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 CPXCR1Q8N123 301 aa12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 PPM1EQ8WY54 764 aa12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 RAB34Q9BZG1 259 aa12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 TANGO6Q9C0B7 1094 aa12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 PSD3Q9NYI0 1048 aa12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 PPP1R9AQ9ULJ8 1098 aa12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 L1RE1Q9UN81 338 aa12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 RPTORQ8N122 1335 aa12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 LRRIQ3A6PVS8 624 aaPredicted RBP12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 N4BP3O15049 544 aa12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 TBX3O15119 743 aa12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 PSMD10O75832 226 aa12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 PPARDQ03181 441 aa12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 REPS2Q8NFH8 660 aa12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 HOMER2Q9NSB8 354 aa12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 RGL1Q9NZL6 768 aa12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 ABCB11O95342 1321 aa12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 LOC285556D6RIA3 1793 aa12.48□□□□□ -0.41
GPATCH1-201ENST00000170564 FLOT1O75955 427 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 HMGCS2P54868 508 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 PRKG1Q13976 671 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 UNC13DQ70J99 1090 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 OTOP1Q7RTM1 612 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 SLFN12Q8IYM2 578 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 CNKSR2Q8WXI2 1034 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 KCNJ18B7U540 433 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 VWA5AO00534 786 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 MNAT1P51948 309 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 GHRHRQ02643 423 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 KCNJ12Q14500 433 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 APOBEC3FQ8IUX4 373 aaKnown RBP12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 FAM71BQ8TC56 605 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 ATG4CQ96DT6 458 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 NAP1L4Q99733 375 aaKnown RBP12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 EXOC1Q9NV70 894 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 HDAC6Q9UBN7 1215 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 MRPL11Q9Y3B7 192 aaKnown RBP12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 ZHX2Q9Y6X8 837 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 BRCA2P51587 3418 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 PEX10O60683 326 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 SRGAP2O75044 1071 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 USP2O75604 605 aaPredicted RBP12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 CYP11B2P19099 503 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 CYP4A11Q02928 519 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 LRRC41Q15345 812 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 COBLL1Q53SF7 1204 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 B3GNT9Q6UX72 402 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 ZNF280CQ8ND82 737 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 CDK5RAP3Q96JB5 506 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 FAM20AQ96MK3 541 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 TAB2Q9NYJ8 693 aa12.47□□□□□ -0.41
GPATCH1-201ENST00000170564 PLA2G4BP0C869 781 aa12.46□□□□□ -0.41
GPATCH1-201ENST00000170564 RPA1P27694 616 aa12.46□□□□□ -0.41
GPATCH1-201ENST00000170564 CCT5P48643 541 aa12.46□□□□□ -0.41
GPATCH1-201ENST00000170564 MRPS25P82663 173 aaKnown RBP12.46□□□□□ -0.41
GPATCH1-201ENST00000170564 MRPS9P82933 396 aaKnown RBP12.46□□□□□ -0.41
GPATCH1-201ENST00000170564 MCTP2Q6DN12 878 aa12.46□□□□□ -0.41
GPATCH1-201ENST00000170564 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.46□□□□□ -0.41
GPATCH1-201ENST00000170564 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.46□□□□□ -0.41
GPATCH1-201ENST00000170564 SLC5A5Q92911 643 aa12.46□□□□□ -0.41
GPATCH1-201ENST00000170564 POLD4Q9HCU8 107 aa12.46□□□□□ -0.41
GPATCH1-201ENST00000170564 TRIM10Q9UDY6 481 aa12.46□□□□□ -0.41
GPATCH1-201ENST00000170564 TFR2Q9UP52 801 aa12.46□□□□□ -0.41
GPATCH1-201ENST00000170564 ADM5C9JUS6 153 aa12.46□□□□□ -0.41
GPATCH1-201ENST00000170564 MARCH6O60337 910 aa12.46□□□□□ -0.41
GPATCH1-201ENST00000170564 MATR3P43243 847 aaKnown RBP eCLIP12.46□□□□□ -0.41
GPATCH1-201ENST00000170564 HSD17B14Q9BPX1 270 aa12.46□□□□□ -0.41
GPATCH1-201ENST00000170564 PVALEFA0A1B0GWK0 134 aa12.46□□□□□ -0.42
GPATCH1-201ENST00000170564 GYPCP04921 128 aa12.46□□□□□ -0.42
GPATCH1-201ENST00000170564 COASYQ13057 564 aa12.46□□□□□ -0.42
GPATCH1-201ENST00000170564 CEP55Q53EZ4 464 aa12.46□□□□□ -0.42
GPATCH1-201ENST00000170564 CENPPQ6IPU0 288 aa12.46□□□□□ -0.42
GPATCH1-201ENST00000170564 GPIHBP1Q8IV16 184 aa12.46□□□□□ -0.42
GPATCH1-201ENST00000170564 P2RX5Q93086 422 aa12.46□□□□□ -0.42
GPATCH1-201ENST00000170564 WDR11Q9BZH6 1224 aa12.46□□□□□ -0.42
GPATCH1-201ENST00000170564 RNF181Q9P0P0 153 aa12.46□□□□□ -0.42
GPATCH1-201ENST00000170564 MYO6Q9UM54 1294 aa12.46□□□□□ -0.42
GPATCH1-201ENST00000170564 ALAS1P13196 640 aa12.45□□□□□ -0.42
GPATCH1-201ENST00000170564 CASP5P51878 434 aa12.45□□□□□ -0.42
GPATCH1-201ENST00000170564 COPB1P53618 953 aaKnown RBP12.45□□□□□ -0.42
GPATCH1-201ENST00000170564 AMPD3Q01432 767 aa12.45□□□□□ -0.42
GPATCH1-201ENST00000170564 SYTL5Q8TDW5 730 aaPredicted RBP12.45□□□□□ -0.42
GPATCH1-201ENST00000170564 EIF2AK1Q9BQI3 630 aaKnown RBP12.45□□□□□ -0.42
GPATCH1-201ENST00000170564 GINM1Q9NU53 330 aa12.45□□□□□ -0.42
GPATCH1-201ENST00000170564 ADAMTS5Q9UNA0 930 aa12.45□□□□□ -0.42
GPATCH1-201ENST00000170564 AFG3L2Q9Y4W6 797 aa12.45□□□□□ -0.42
GPATCH1-201ENST00000170564 FRMD3A2A2Y4 597 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms