RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 PPP4R1Q8TF05 950 aa20.4■□□□□ 0.86
MBD3-201ENST00000156825 MTMR1Q13613 665 aa20.4■□□□□ 0.86
MBD3-201ENST00000156825 STOX1Q6ZVD7 989 aa20.4■□□□□ 0.86
MBD3-201ENST00000156825 UTYO14607 1347 aa20.39■□□□□ 0.86
MBD3-201ENST00000156825 MYL1P05976 194 aa20.39■□□□□ 0.86
MBD3-201ENST00000156825 GUCY1A2P33402 732 aa20.39■□□□□ 0.86
MBD3-201ENST00000156825 IREB2P48200 963 aaKnown RBP20.39■□□□□ 0.86
MBD3-201ENST00000156825 F5H6K3 240 aa20.39■□□□□ 0.85
MBD3-201ENST00000156825 KLRC3Q07444 240 aa20.39■□□□□ 0.85
MBD3-201ENST00000156825 SLC38A10Q9HBR0 1119 aa20.39■□□□□ 0.85
MBD3-201ENST00000156825 PRCPP42785 496 aa20.39■□□□□ 0.85
MBD3-201ENST00000156825 CCT5P48643 541 aa20.39■□□□□ 0.85
MBD3-201ENST00000156825 CLEC10AQ8IUN9 316 aa20.39■□□□□ 0.85
MBD3-201ENST00000156825 HEXIM2Q96MH2 286 aaKnown RBP20.39■□□□□ 0.85
MBD3-201ENST00000156825 POTEFA5A3E0 1075 aa20.38■□□□□ 0.85
MBD3-201ENST00000156825 POTEIP0CG38 1075 aa20.38■□□□□ 0.85
MBD3-201ENST00000156825 GCLMP48507 274 aa20.38■□□□□ 0.85
MBD3-201ENST00000156825 POTEGQ6S5H5 508 aa20.38■□□□□ 0.85
MBD3-201ENST00000156825 POTEEQ6S8J3 1075 aa20.38■□□□□ 0.85
MBD3-201ENST00000156825 ABT1Q9ULW3 272 aaKnown RBP20.38■□□□□ 0.85
MBD3-201ENST00000156825 INHBAP08476 426 aa20.38■□□□□ 0.85
MBD3-201ENST00000156825 SNRNP48Q6IEG0 339 aaKnown RBP20.38■□□□□ 0.85
MBD3-201ENST00000156825 XPOTO43592 962 aaKnown RBP20.38■□□□□ 0.85
MBD3-201ENST00000156825 TDP2O95551 362 aa20.38■□□□□ 0.85
MBD3-201ENST00000156825 DHX9Q08211 1270 aaKnown RBP20.38■□□□□ 0.85
MBD3-201ENST00000156825 CHRNA5P30532 468 aa20.38■□□□□ 0.85
MBD3-201ENST00000156825 GBP1P32455 592 aa20.38■□□□□ 0.85
MBD3-201ENST00000156825 ATG9AQ7Z3C6 839 aa20.38■□□□□ 0.85
MBD3-201ENST00000156825 FAM71BQ8TC56 605 aa20.38■□□□□ 0.85
MBD3-201ENST00000156825 SERPING1P05155 500 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 ARHGAP4P98171 946 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 PODNQ7Z5L7 613 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 ARHGAP24Q8N264 748 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 CCDC68Q9H2F9 335 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 MROH7-TTC4A0A0A0MT08 1334 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 KIF28PB7ZC32 967 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 ECE1P42892 770 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 DNAAF3Q8N9W5 541 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 PARD6BQ9BYG5 372 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 HAUS2Q9NVX0 235 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 SRGAP2O75044 1071 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 AKR1B1P15121 316 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 ZNF18P17022 549 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 PSMD2Q13200 908 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 QRICH1Q2TAL8 776 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 RSPH3Q86UC2 560 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 SLC17A8Q8NDX2 589 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 LRRC4Q9HBW1 653 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 INTS9Q9NV88 658 aaKnown RBP20.37■□□□□ 0.85
MBD3-201ENST00000156825 FAN1Q9Y2M0 1017 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 MFAP3LO75121 409 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 SESN3P58005 492 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 LRRC63Q05C16 580 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 TOGARAM2Q6ZUX3 1019 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 DYDC2Q96IM9 177 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 PASD1Q8IV76 773 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 SH2D3AQ9BRG2 576 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 NUF2Q9BZD4 464 aa20.37■□□□□ 0.85
MBD3-201ENST00000156825 SCAF8Q9UPN6 1271 aaKnown RBP20.37■□□□□ 0.85
MBD3-201ENST00000156825 ZNF233A6NK53 670 aa20.36■□□□□ 0.85
MBD3-201ENST00000156825 SLC16A4O15374 487 aa20.36■□□□□ 0.85
MBD3-201ENST00000156825 VCX3BQ9H321 246 aa20.36■□□□□ 0.85
MBD3-201ENST00000156825 CDHR2Q9BYE9 1310 aa20.36■□□□□ 0.85
MBD3-201ENST00000156825 ECEL1O95672 775 aa20.36■□□□□ 0.85
MBD3-201ENST00000156825 NCAPD2Q15021 1401 aa20.36■□□□□ 0.85
MBD3-201ENST00000156825 RAPH1Q70E73 1250 aa20.36■□□□□ 0.85
MBD3-201ENST00000156825 ZDHHC9Q9Y397 364 aa20.36■□□□□ 0.85
MBD3-201ENST00000156825 ZSCAN20P17040 1043 aaPredicted RBP20.36■□□□□ 0.85
MBD3-201ENST00000156825 UNC13DQ70J99 1090 aa20.36■□□□□ 0.85
MBD3-201ENST00000156825 LRRC8CQ8TDW0 803 aa20.36■□□□□ 0.85
MBD3-201ENST00000156825 BAG2O95816 211 aa20.35■□□□□ 0.85
MBD3-201ENST00000156825 CLTAP09496 248 aa20.35■□□□□ 0.85
MBD3-201ENST00000156825 MYLK4Q86YV6 388 aaPredicted RBP20.35■□□□□ 0.85
MBD3-201ENST00000156825 FMR1NBQ8N0W7 255 aaPredicted RBP20.35■□□□□ 0.85
MBD3-201ENST00000156825 KCTD6Q8NC69 237 aa20.35■□□□□ 0.85
MBD3-201ENST00000156825 JRKLQ9Y4A0 524 aa20.35■□□□□ 0.85
MBD3-201ENST00000156825 CLNS1AP54105 237 aaKnown RBP20.35■□□□□ 0.85
MBD3-201ENST00000156825 KIAA1841Q6NSI8 718 aa20.35■□□□□ 0.85
MBD3-201ENST00000156825 ADGRF4Q8IZF3 695 aa20.35■□□□□ 0.85
MBD3-201ENST00000156825 ZWILCHQ9H900 591 aa20.35■□□□□ 0.85
MBD3-201ENST00000156825 RPF1Q9H9Y2 349 aaKnown RBP20.35■□□□□ 0.85
MBD3-201ENST00000156825 ANAPC5Q9UJX4 755 aa20.35■□□□□ 0.85
MBD3-201ENST00000156825 CDC42BPGQ6DT37 1551 aa20.35■□□□□ 0.85
MBD3-201ENST00000156825 DARS2Q6PI48 645 aaKnown RBP20.35■□□□□ 0.85
MBD3-201ENST00000156825 PADI6Q6TGC4 694 aa20.35■□□□□ 0.85
MBD3-201ENST00000156825 NGRNQ9NPE2 291 aaKnown RBP20.35■□□□□ 0.85
MBD3-201ENST00000156825 DNAJC12Q9UKB3 198 aa20.35■□□□□ 0.85
MBD3-201ENST00000156825 SH2D4BQ5SQS7 431 aa20.35■□□□□ 0.85
MBD3-201ENST00000156825 DCAF4Q8WV16 495 aa20.35■□□□□ 0.85
MBD3-201ENST00000156825 CLTCL1P53675 1640 aa20.35■□□□□ 0.85
MBD3-201ENST00000156825 TMED2Q15363 201 aa20.34■□□□□ 0.85
MBD3-201ENST00000156825 LMNTD2Q8IXW0 634 aa20.34■□□□□ 0.85
MBD3-201ENST00000156825 MARCH10Q8NA82 808 aaPredicted RBP20.34■□□□□ 0.85
MBD3-201ENST00000156825 MED4Q9NPJ6 270 aa20.34■□□□□ 0.85
MBD3-201ENST00000156825 SH3GLB2Q9NR46 395 aa20.34■□□□□ 0.85
MBD3-201ENST00000156825 CATSPER4Q7RTX7 472 aa20.34■□□□□ 0.85
MBD3-201ENST00000156825 RYBPQ8N488 228 aaPredicted RBP20.34■□□□□ 0.85
MBD3-201ENST00000156825 RNF146Q9NTX7 359 aa20.34■□□□□ 0.85
MBD3-201ENST00000156825 FAM205CA6NFA0 338 aa20.34■□□□□ 0.85
MBD3-201ENST00000156825 EN1Q05925 392 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms