RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 MYH2Q9UKX2 1941 aa13.21□□□□□ -0.3
CHPF2-201ENST00000035307 NCK2O43639 380 aa13.21□□□□□ -0.3
CHPF2-201ENST00000035307 FOSP01100 380 aaPredicted RBP13.21□□□□□ -0.3
CHPF2-201ENST00000035307 MTMR1Q13613 665 aa13.21□□□□□ -0.3
CHPF2-201ENST00000035307 GRIPAP1Q4V328 841 aa13.21□□□□□ -0.3
CHPF2-201ENST00000035307 CYFIP1Q7L576 1253 aa13.21□□□□□ -0.3
CHPF2-201ENST00000035307 CLMNQ96JQ2 1002 aa13.21□□□□□ -0.3
CHPF2-201ENST00000035307 FAN1Q9Y2M0 1017 aa13.21□□□□□ -0.3
CHPF2-201ENST00000035307 ADGRG1Q9Y653 693 aa13.21□□□□□ -0.3
CHPF2-201ENST00000035307 IPO5O00410 1097 aaKnown RBP13.2□□□□□ -0.3
CHPF2-201ENST00000035307 ZSCAN20P17040 1043 aaPredicted RBP13.2□□□□□ -0.3
CHPF2-201ENST00000035307 RPS6P62753 249 aaKnown RBP13.2□□□□□ -0.3
CHPF2-201ENST00000035307 GUCY2DQ02846 1103 aa13.2□□□□□ -0.3
CHPF2-201ENST00000035307 CCDC114Q96M63 670 aa13.2□□□□□ -0.3
CHPF2-201ENST00000035307 MTA3Q9BTC8 594 aa13.2□□□□□ -0.3
CHPF2-201ENST00000035307 SYNCQ9H7C4 482 aa13.2□□□□□ -0.3
CHPF2-201ENST00000035307 ABCB6Q9NP58 842 aa13.2□□□□□ -0.3
CHPF2-201ENST00000035307 RIC8AQ9NPQ8 531 aa13.2□□□□□ -0.3
CHPF2-201ENST00000035307 AGPAT5Q9NUQ2 364 aa13.2□□□□□ -0.3
CHPF2-201ENST00000035307 TOGARAM1Q9Y4F4 1720 aa13.2□□□□□ -0.3
CHPF2-201ENST00000035307 MAP2K1Q02750 393 aaPredicted RBP13.2□□□□□ -0.3
CHPF2-201ENST00000035307 PPM1KQ8N3J5 372 aa13.2□□□□□ -0.3
CHPF2-201ENST00000035307 PROCA1Q8NCQ7 364 aaPredicted RBP13.2□□□□□ -0.3
CHPF2-201ENST00000035307 SMARCAL1Q9NZC9 954 aa13.2□□□□□ -0.3
CHPF2-201ENST00000035307 HYOU1Q9Y4L1 999 aa13.2□□□□□ -0.3
CHPF2-201ENST00000035307 ACTN4O43707 911 aaKnown RBP13.2□□□□□ -0.3
CHPF2-201ENST00000035307 CALUO43852 315 aaPredicted RBP13.2□□□□□ -0.3
CHPF2-201ENST00000035307 USP14P54578 494 aa13.2□□□□□ -0.3
CHPF2-201ENST00000035307 TNNC1P63316 161 aa13.2□□□□□ -0.3
CHPF2-201ENST00000035307 GSTA5Q7RTV2 222 aa13.2□□□□□ -0.3
CHPF2-201ENST00000035307 AFAP1L1Q8TED9 768 aa13.2□□□□□ -0.3
CHPF2-201ENST00000035307 UPF1Q92900 1129 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHPF2-201ENST00000035307 CEP170P1Q96L14 293 aa13.2□□□□□ -0.3
CHPF2-201ENST00000035307 ANKFY1Q9P2R3 1169 aa13.2□□□□□ -0.3
CHPF2-201ENST00000035307 TUBE1Q9UJT0 475 aa13.2□□□□□ -0.3
CHPF2-201ENST00000035307 PKD1L3Q7Z443 1732 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 GOLGA6L7A0A1B0GV03 622 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 DMTNQ08495 405 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 ANKRD40Q6AI12 368 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 CCDC155Q8N6L0 562 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 TSGA10Q9BZW7 698 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 EMILIN3Q9NT22 766 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 ESYT3A0FGR9 886 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 VCAM1P19320 739 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 EEF1GP26641 437 aaKnown RBP13.19□□□□□ -0.3
CHPF2-201ENST00000035307 FKBP3Q00688 224 aaKnown RBP13.19□□□□□ -0.3
CHPF2-201ENST00000035307 FAM47CQ5HY64 1035 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 ARMC9Q7Z3E5 817 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 FAM160B2Q86V87 743 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 MCF2L2Q86YR7 1114 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 APOBEC3FQ8IUX4 373 aaKnown RBP13.19□□□□□ -0.3
CHPF2-201ENST00000035307 SLFN12Q8IYM2 578 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 TC2NQ8N9U0 490 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 KRT12Q99456 494 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 USP20Q9Y2K6 914 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 GFPT2O94808 682 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 HDLBPQ00341 1268 aaKnown RBP13.19□□□□□ -0.3
CHPF2-201ENST00000035307 EXOC3L4Q17RC7 722 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 SFR1Q86XK3 245 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 TTC16Q8NEE8 873 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 RABGGTAQ92696 567 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 DHTKD1Q96HY7 919 aaPredicted RBP13.19□□□□□ -0.3
CHPF2-201ENST00000035307 AZI2Q9H6S1 392 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 SH3GLB2Q9NR46 395 aa13.19□□□□□ -0.3
CHPF2-201ENST00000035307 ARP10275 920 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 CETN2P41208 172 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 NPEPPSP55786 919 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 PLA2G4FQ68DD2 849 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 ZNF579Q8NAF0 562 aaKnown RBP13.18□□□□□ -0.3
CHPF2-201ENST00000035307 IPO4Q8TEX9 1081 aaKnown RBP13.18□□□□□ -0.3
CHPF2-201ENST00000035307 BBXQ8WY36 941 aaPredicted RBP13.18□□□□□ -0.3
CHPF2-201ENST00000035307 FNBP1Q96RU3 617 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 PSMD1Q99460 953 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 IDI2Q9BXS1 227 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 WDR11Q9BZH6 1224 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 FEM1BQ9UK73 627 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 PHLPP2Q6ZVD8 1323 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 KIF11P52732 1056 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 GFPT1Q06210 699 aaPredicted RBP13.18□□□□□ -0.3
CHPF2-201ENST00000035307 PPP1R7Q15435 360 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 SLC35G1Q2M3R5 365 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 CFAP221Q4G0U5 840 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 ZNF185O15231 689 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 CCDC172P0C7W6 258 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 PPP1R2P41236 205 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 STAT1P42224 750 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 FUT2Q10981 343 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 ZSCAN26Q16670 478 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 SWSAP1Q6NVH7 229 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 C15orf52Q6ZUT6 534 aaKnown RBP13.18□□□□□ -0.3
CHPF2-201ENST00000035307 TRIM58Q8NG06 486 aa13.18□□□□□ -0.3
CHPF2-201ENST00000035307 MYMKA6NI61 221 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 NDUFAB1O14561 156 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 PPP1R11O60927 126 aaPredicted RBP13.17□□□□□ -0.3
CHPF2-201ENST00000035307 SRGAP2CP0DJJ0 459 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 EPHX2P34913 555 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 RCAN1P53805 252 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 PEX3P56589 373 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 COG2Q14746 738 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 NCAPHQ15003 741 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms