RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 GRIK4Q16099 956 aa18.16■□□□□ 0.5
ERCC1-201ENST00000013807 CEP55Q53EZ4 464 aa18.16■□□□□ 0.5
ERCC1-201ENST00000013807 FAM117BQ6P1L5 589 aa18.16■□□□□ 0.5
ERCC1-201ENST00000013807 RUFY4Q6ZNE9 571 aa18.16■□□□□ 0.5
ERCC1-201ENST00000013807 FAM43BQ6ZT52 329 aaPredicted RBP18.16■□□□□ 0.5
ERCC1-201ENST00000013807 PLPPR4Q7Z2D5 763 aa18.16■□□□□ 0.5
ERCC1-201ENST00000013807 RSPH3Q86UC2 560 aa18.16■□□□□ 0.5
ERCC1-201ENST00000013807 JPH1Q9HDC5 661 aaPredicted RBP18.16■□□□□ 0.5
ERCC1-201ENST00000013807 SLC9A2Q9UBY0 812 aa18.16■□□□□ 0.5
ERCC1-201ENST00000013807 TUBE1Q9UJT0 475 aa18.16■□□□□ 0.5
ERCC1-201ENST00000013807 V9GY48 417 aaPredicted RBP18.16■□□□□ 0.5
ERCC1-201ENST00000013807 RBAK-RBAKDNI3L0D1 243 aa18.15■□□□□ 0.5
ERCC1-201ENST00000013807 CDC45O75419 566 aa18.15■□□□□ 0.5
ERCC1-201ENST00000013807 SREBF1P36956 1147 aa18.15■□□□□ 0.5
ERCC1-201ENST00000013807 NAPAP54920 295 aa18.15■□□□□ 0.5
ERCC1-201ENST00000013807 AP3B2Q13367 1082 aa18.15■□□□□ 0.5
ERCC1-201ENST00000013807 NIPA1Q7RTP0 329 aa18.15■□□□□ 0.5
ERCC1-201ENST00000013807 FBXO22Q8NEZ5 403 aa18.15■□□□□ 0.5
ERCC1-201ENST00000013807 CYP2W1Q8TAV3 490 aa18.15■□□□□ 0.5
ERCC1-201ENST00000013807 GLG1Q92896 1179 aa18.15■□□□□ 0.5
ERCC1-201ENST00000013807 TNPO1Q92973 898 aaKnown RBP18.15■□□□□ 0.5
ERCC1-201ENST00000013807 C17orf80Q9BSJ5 609 aa18.15■□□□□ 0.5
ERCC1-201ENST00000013807 IGKV6D-21A0A0A0MT36 114 aa18.14■□□□□ 0.49
ERCC1-201ENST00000013807 SMCO2A6NFE2 343 aa18.14■□□□□ 0.49
ERCC1-201ENST00000013807 H3BNC9 293 aa18.14■□□□□ 0.49
ERCC1-201ENST00000013807 SLC26A2P50443 739 aa18.14■□□□□ 0.49
ERCC1-201ENST00000013807 LPIN1Q14693 890 aa18.14■□□□□ 0.49
ERCC1-201ENST00000013807 EPC2Q52LR7 807 aa18.14■□□□□ 0.49
ERCC1-201ENST00000013807 CRYGNQ8WXF5 182 aa18.14■□□□□ 0.49
ERCC1-201ENST00000013807 MRPL38Q96DV4 380 aaKnown RBP18.14■□□□□ 0.49
ERCC1-201ENST00000013807 TCEANC2Q96MN5 208 aa18.14■□□□□ 0.49
ERCC1-201ENST00000013807 ANO3Q9BYT9 981 aa18.14■□□□□ 0.49
ERCC1-201ENST00000013807 RC3H2Q9HBD1 1191 aaKnown RBP18.14■□□□□ 0.49
ERCC1-201ENST00000013807 MTUS1Q9ULD2 1270 aa18.14■□□□□ 0.49
ERCC1-201ENST00000013807 NID2Q14112 1375 aa18.14■□□□□ 0.49
ERCC1-201ENST00000013807 CCDC196A0A1B0GTZ2 297 aa18.13■□□□□ 0.49
ERCC1-201ENST00000013807 ESYT2A0FGR8 921 aa18.13■□□□□ 0.49
ERCC1-201ENST00000013807 C5orf67F2Z3F1 127 aa18.13■□□□□ 0.49
ERCC1-201ENST00000013807 ARP10275 920 aa18.13■□□□□ 0.49
ERCC1-201ENST00000013807 INSRRP14616 1297 aa18.13■□□□□ 0.49
ERCC1-201ENST00000013807 CDC27P30260 824 aa18.13■□□□□ 0.49
ERCC1-201ENST00000013807 ADCY7P51828 1080 aa18.13■□□□□ 0.49
ERCC1-201ENST00000013807 FBXO47Q5MNV8 452 aa18.13■□□□□ 0.49
ERCC1-201ENST00000013807 SKAP1Q86WV1 359 aa18.13■□□□□ 0.49
ERCC1-201ENST00000013807 CRIPAKQ8N1N5 446 aa18.13■□□□□ 0.49
ERCC1-201ENST00000013807 DNAJB3Q8WWF6 145 aa18.13■□□□□ 0.49
ERCC1-201ENST00000013807 YME1L1Q96TA2 773 aa18.13■□□□□ 0.49
ERCC1-201ENST00000013807 AGXT2Q9BYV1 514 aa18.13■□□□□ 0.49
ERCC1-201ENST00000013807 AGO4Q9HCK5 861 aaKnown RBP18.13■□□□□ 0.49
ERCC1-201ENST00000013807 PCDHA2Q9Y5H9 948 aa18.13■□□□□ 0.49
ERCC1-201ENST00000013807 KLF18A0A0U1RQI7 1052 aa18.12■□□□□ 0.49
ERCC1-201ENST00000013807 ENPP3O14638 875 aa18.12■□□□□ 0.49
ERCC1-201ENST00000013807 CYP3A4P08684 503 aa18.12■□□□□ 0.49
ERCC1-201ENST00000013807 LINC00271P0C7V0 271 aa18.12■□□□□ 0.49
ERCC1-201ENST00000013807 MARK3P27448 753 aa18.12■□□□□ 0.49
ERCC1-201ENST00000013807 ACTR2P61160 394 aa18.12■□□□□ 0.49
ERCC1-201ENST00000013807 ITGB3BPQ13352 177 aaPredicted RBP18.12■□□□□ 0.49
ERCC1-201ENST00000013807 COL19A1Q14993 1142 aa18.12■□□□□ 0.49
ERCC1-201ENST00000013807 PFKFB3Q16875 520 aaPredicted RBP18.12■□□□□ 0.49
ERCC1-201ENST00000013807 MCTP2Q6DN12 878 aa18.12■□□□□ 0.49
ERCC1-201ENST00000013807 TSHZ1Q6ZSZ6 1077 aa18.12■□□□□ 0.49
ERCC1-201ENST00000013807 TMEM192Q8IY95 271 aa18.12■□□□□ 0.49
ERCC1-201ENST00000013807 IL17RAQ96F46 866 aa18.12■□□□□ 0.49
ERCC1-201ENST00000013807 SDF4Q9BRK5 362 aa18.12■□□□□ 0.49
ERCC1-201ENST00000013807 ZMYND12Q9H0C1 365 aa18.12■□□□□ 0.49
ERCC1-201ENST00000013807 AZI2Q9H6S1 392 aa18.12■□□□□ 0.49
ERCC1-201ENST00000013807 KDM3AQ9Y4C1 1321 aa18.12■□□□□ 0.49
ERCC1-201ENST00000013807 GOLGA8AA7E2F4 631 aa18.11■□□□□ 0.49
ERCC1-201ENST00000013807 GOLGA8BA8MQT2 603 aa18.11■□□□□ 0.49
ERCC1-201ENST00000013807 RB1P06400 928 aa18.11■□□□□ 0.49
ERCC1-201ENST00000013807 GHRP10912 638 aa18.11■□□□□ 0.49
ERCC1-201ENST00000013807 HSPA4P34932 840 aa18.11■□□□□ 0.49
ERCC1-201ENST00000013807 ADD1P35611 737 aaKnown RBP18.11■□□□□ 0.49
ERCC1-201ENST00000013807 STAT5BP51692 787 aa18.11■□□□□ 0.49
ERCC1-201ENST00000013807 PLCB4Q15147 1175 aa18.11■□□□□ 0.49
ERCC1-201ENST00000013807 PTPROQ16827 1216 aa18.11■□□□□ 0.49
ERCC1-201ENST00000013807 IER5Q5VY09 327 aa18.11■□□□□ 0.49
ERCC1-201ENST00000013807 NME8Q8N427 588 aa18.11■□□□□ 0.49
ERCC1-201ENST00000013807 CLP1Q92989 425 aaKnown RBP18.11■□□□□ 0.49
ERCC1-201ENST00000013807 ZNF689Q96CS4 500 aaPredicted RBP18.11■□□□□ 0.49
ERCC1-201ENST00000013807 NECAB3Q96P71 396 aaPredicted RBP18.11■□□□□ 0.49
ERCC1-201ENST00000013807 PKD2L1Q9P0L9 805 aa18.11■□□□□ 0.49
ERCC1-201ENST00000013807 CDY2AQ9Y6F7 541 aa18.11■□□□□ 0.49
ERCC1-201ENST00000013807 KIAA1671Q9BY89 1806 aa18.11■□□□□ 0.49
ERCC1-201ENST00000013807 IGLV3-22A0A075B6J6 115 aa18.1■□□□□ 0.49
ERCC1-201ENST00000013807 SMIM35A0A1B0GVV1 85 aa18.1■□□□□ 0.49
ERCC1-201ENST00000013807 DHX15O43143 795 aaKnown RBP18.1■□□□□ 0.49
ERCC1-201ENST00000013807 UPP2O95045 317 aa18.1■□□□□ 0.49
ERCC1-201ENST00000013807 EVCP57679 992 aa18.1■□□□□ 0.49
ERCC1-201ENST00000013807 MRPS6P82932 125 aaKnown RBP18.1■□□□□ 0.49
ERCC1-201ENST00000013807 LEXMQ3ZCV2 418 aa18.1■□□□□ 0.49
ERCC1-201ENST00000013807 ABHD15Q6UXT9 468 aa18.1■□□□□ 0.49
ERCC1-201ENST00000013807 FTHL17Q9BXU8 183 aa18.1■□□□□ 0.49
ERCC1-201ENST00000013807 UBE2ZQ9H832 354 aaPredicted RBP18.1■□□□□ 0.49
ERCC1-201ENST00000013807 AGO3Q9H9G7 860 aaKnown RBP18.1■□□□□ 0.49
ERCC1-201ENST00000013807 RWDD3Q9Y3V2 267 aa18.1■□□□□ 0.49
ERCC1-201ENST00000013807 IGSF9BQ9UPX0 1349 aa18.09■□□□□ 0.49
ERCC1-201ENST00000013807 FAM86B1E9PN63 330 aa18.09■□□□□ 0.49
ERCC1-201ENST00000013807 PRPF3O43395 683 aaKnown RBP18.09■□□□□ 0.49
ERCC1-201ENST00000013807 FAM86B2P0C5J1 330 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms