RNA–Protein interactions for RNA: ENSMUST00000173347.7

Lig3-210, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-210ENSMUST00000173347 RaraP11416 462 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Pola2P33611 600 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Rpl13P47963 211 aaKnown RBP11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Mrps31Q61733 384 aaKnown RBP11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Exoc3Q6KAR6 755 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Ankrd24Q80VM7 985 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Pank4Q80YV4 820 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Ireb2Q811J3 963 aaKnown RBP11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Arhgef7Q9ES28 862 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 MyocO70624 490 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Neurl1bQ0MW30 546 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Ttll12Q3UDE2 639 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Gm5169Q5M8P2 212 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Gpd2Q64521 727 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Haus4Q8BFT2 363 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Ttc26Q8BS45 554 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Cog5Q8C0L8 829 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Vmn1r199Q8R280 367 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Epb41l4aP52963 686 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Rad23aP54726 363 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Chp1P61022 195 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Ano9P86044 747 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Fgfr4Q03142 799 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 SlmapQ3URD3 845 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 EregQ61521 162 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Recql4Q75NR7 1216 aaKnown RBP11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Adcy3Q8VHH7 1145 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Rwdd2aQ9D9S3 292 aa11.94□□□□□ -0.5
Lig3-210ENSMUST00000173347 Stim2P83093 746 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Arl14Q3SXC5 192 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Fam217aQ9D9W6 419 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Gm45194A0A140LJG2 572 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Eif3dO70194 548 aaKnown RBP11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Kiaa0754Q69ZZ9 979 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Senp5Q6NXL6 749 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Tlr13Q6R5N8 991 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Atp1a1Q8VDN2 1023 aaKnown RBP11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Ercc4Q9QZD4 917 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Pgap3A2A559 320 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Ace3D0G895 737 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Scgb2b19J3QM75 112 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Nmt1O70310 496 aaKnown RBP11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Fgd3O88842 733 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Cyp11b2P15539 500 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Lig1P37913 916 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Psmb7P70195 277 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Znf827Q505G8 1078 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Usp17leQ7M764 540 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Maip1Q8BHE8 291 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Sulf1Q8K007 870 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Stap2Q8R0L1 411 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Sgms1Q8VCQ6 419 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Pcdhb12Q91Y07 789 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 FignQ9ERZ6 759 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Myh11O08638 1972 aa11.93□□□□□ -0.5
Lig3-210ENSMUST00000173347 Apol6B7ZC55 329 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Got1P05201 413 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Slc10a4Q3UEZ8 437 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Sycp1Q62209 993 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 CtifQ6PEE2 600 aaKnown RBP11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Btnl9Q8BJE2 536 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Slc9b1Q8C0X2 565 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Nxf1Q99JX7 618 aaKnown RBP11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Cdca7Q9D0M2 382 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Plcg1Q62077 1302 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Sec14l1A8Y5H7 715 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Fam83hQ148V8 1209 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Klhl20Q8VCK5 604 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Ubxn2aQ99KJ0 258 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Ears2Q9CXJ1 523 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Mipol1Q9D9F8 279 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Tmod4Q9JLH8 345 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Gm28042B7ZCM9 1014 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Card6E9PWH2 1175 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 TazI7HJS2 263 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Atp9aO70228 1047 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Senp1P59110 640 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Trim25Q61510 634 aaKnown RBP11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Pgm5Q8BZF8 567 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Usp33Q8R5K2 909 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Lpin2Q99PI5 893 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Creld2Q9CYA0 350 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 4931423N10RikQ9D4J9 382 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Megf6Q80V70 1572 aa11.92□□□□□ -0.5
Lig3-210ENSMUST00000173347 Psmc5P62196 406 aa11.91□□□□□ -0.5
Lig3-210ENSMUST00000173347 Atp11aP98197 1187 aa11.91□□□□□ -0.5
Lig3-210ENSMUST00000173347 Otud5Q3U2S4 566 aa11.91□□□□□ -0.5
Lig3-210ENSMUST00000173347 MaeaQ4VC33 396 aa11.91□□□□□ -0.5
Lig3-210ENSMUST00000173347 Kiaa0391Q8JZY4 584 aaKnown RBP11.91□□□□□ -0.5
Lig3-210ENSMUST00000173347 Ccdc12Q8R344 166 aaKnown RBP11.91□□□□□ -0.5
Lig3-210ENSMUST00000173347 Rhobtb2Q91V93 728 aa11.91□□□□□ -0.5
Lig3-210ENSMUST00000173347 Usp26Q99MX1 835 aa11.91□□□□□ -0.5
Lig3-210ENSMUST00000173347 YwhabQ9CQV8 246 aaKnown RBP11.91□□□□□ -0.5
Lig3-210ENSMUST00000173347 Oog1E9Q5G7 496 aa11.91□□□□□ -0.5
Lig3-210ENSMUST00000173347 Nfxl1E9Q8I7 918 aaKnown RBP11.91□□□□□ -0.5
Lig3-210ENSMUST00000173347 Exoc4O35382 975 aa11.91□□□□□ -0.5
Lig3-210ENSMUST00000173347 Pgrmc1O55022 195 aa11.91□□□□□ -0.5
Lig3-210ENSMUST00000173347 Magea8O89012 320 aa11.91□□□□□ -0.5
Lig3-210ENSMUST00000173347 Irf5P56477 497 aa11.91□□□□□ -0.5
Lig3-210ENSMUST00000173347 Zc3h18Q0P678 948 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms