RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Xpo5Q924C1 1204 aaKnown RBP11.02□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 RnmtQ9D0L8 465 aaKnown RBP11.02□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Arhgef7Q9ES28 862 aa11.02□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Ttc6G3UYY4 1857 aa11.02□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Thsd7bQ6P4U0 1607 aa11.01□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Gm7086A0A1W2P766 342 aa11.01□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Itgb7P26011 806 aa11.01□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Nsun7Q14AW5 724 aa11.01□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Scarf1Q5ND28 820 aa11.01□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Ddx4Q61496 702 aa11.01□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Skiv2lQ6NZR5 1244 aa11.01□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Pramel7Q810Y8 479 aa11.01□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Azin2Q8BVM4 459 aa11.01□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Tbc1d10cQ8C9V1 444 aa11.01□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Tacc2Q9JJG0 1149 aa11.01□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Phtf1Q9QZ09 761 aa11.01□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Akr1b1P45376 316 aa11.01□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Slc7a1Q09143 622 aa11.01□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Ildr1Q8CBR1 537 aa11.01□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Matr3Q8K310 846 aaKnown RBP11.01□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Trib2Q8K4K3 343 aa11.01□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Kcnc4Q8R1C0 628 aa11.01□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Ushbp1Q8R370 680 aa11.01□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Exoc1Q8R3S6 894 aa11.01□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Slc6a16A0A1L1SR47 742 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Zfp984A2A7A2 547 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Dhtkd1A2ATU0 921 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Barx2O08686 283 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 E2f8Q58FA4 860 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Kdm1aQ6ZQ88 853 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Tmc3Q7TQ69 1130 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Pdlim2Q8R1G6 349 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 PccaQ91ZA3 724 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Mettl7bQ9DD20 244 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Magi2Q9WVQ1 1275 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Mtmr1Q9Z2C4 669 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 PatjQ63ZW7 1834 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Abcb11Q9QY30 1321 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Gm44511A0A0N4SW10 223 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Klrb1bP27812 223 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Gabpb2P81069 414 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Pou2f2Q00196 463 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Mcm7Q61881 719 aaKnown RBP11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Raver2Q7TPD6 673 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 PhkbQ7TSH2 1085 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Tbc1d10bQ8BHL3 798 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Ipo5Q8BKC5 1097 aaKnown RBP11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 NelfbQ8C4Y3 580 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Lrrc56Q8K375 552 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Pcdha12Q91Y18 950 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Ears2Q9CXJ1 523 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Hebp1Q9R257 190 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Tlk2O55047 718 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Nmt1O70310 496 aaKnown RBP11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Hoxd10P28359 340 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Acot10Q32MW3 439 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 VwdeQ6DFV8 926 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Calhm6Q8C9E8 313 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Nek9Q8K1R7 984 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Prpf6Q91YR7 941 aaKnown RBP11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Slc26a4Q9R155 780 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Pex11aQ9Z211 246 aa11□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Ttll6A4Q9E8 822 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Gm4307E9PZY4 289 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Gm4312K9J7E2 289 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Tnni3P48787 211 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Lpar1P61793 364 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Serpinb3dQ6UKZ0 387 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Amer2Q8CCJ4 672 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Snx10Q9CWT3 201 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Snx29Q9D3S3 818 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Smim10l2aA0A0B4J1F8 78 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Nkx1-1G3UXB3 402 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Nol4P60954 483 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Podnl1Q6P3Y9 559 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Tcaf3Q6QR59 914 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Nacc1Q7TSZ8 514 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Zbed4Q80WQ9 1168 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Dnttip2Q8R2M2 758 aaKnown RBP10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Eps8l1Q8R5F8 716 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Hdhd5Q91WM2 419 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Galnt15Q9D2N8 638 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Spint1Q9R097 507 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Syt5Q9R0N5 386 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 CluhQ5SW19 1315 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Fam184aE9PW83 1143 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Guca2bO09051 106 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Pak1O88643 545 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Bcat1P24288 386 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 TdgP56581 421 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Rasa2P58069 847 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Elf1Q60775 612 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Sdccag8Q80UF4 717 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Dusp4Q8BFV3 398 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Fbxo44Q8BK26 255 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Dhx32Q8BZS9 744 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Rnf208Q8K0W3 265 aa10.99□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Arhgap1Q5FWK3 439 aa10.98□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 NfrkbQ6PIJ4 1296 aaKnown RBP10.98□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 NostrinQ6WKZ7 506 aa10.98□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms