RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Uap1Q91YN5 522 aa20.38■□□□□ 0.85
Upf1-201ENSMUST00000075666 Wbp11Q923D5 641 aaKnown RBP20.38■□□□□ 0.85
Upf1-201ENSMUST00000075666 Grtp1Q9D3N8 359 aa20.38■□□□□ 0.85
Upf1-201ENSMUST00000075666 IkbipQ9DBZ1 373 aa20.38■□□□□ 0.85
Upf1-201ENSMUST00000075666 Syngap1F6SEU4 1340 aa20.37■□□□□ 0.85
Upf1-201ENSMUST00000075666 Slitrk3Q810B9 980 aa20.37■□□□□ 0.85
Upf1-201ENSMUST00000075666 Ccdc80Q8R2G6 949 aa20.37■□□□□ 0.85
Upf1-201ENSMUST00000075666 Eps8l2Q99K30 729 aa20.37■□□□□ 0.85
Upf1-201ENSMUST00000075666 Mrps9Q9D7N3 390 aaKnown RBP20.37■□□□□ 0.85
Upf1-201ENSMUST00000075666 Prex1Q69ZK0 1650 aa20.37■□□□□ 0.85
Upf1-201ENSMUST00000075666 AglF8VPN4 1532 aa20.37■□□□□ 0.85
Upf1-201ENSMUST00000075666 Man1a2P39098 641 aa20.37■□□□□ 0.85
Upf1-201ENSMUST00000075666 Setd6Q9CWY3 473 aa20.37■□□□□ 0.85
Upf1-201ENSMUST00000075666 Sdr42e1Q9D665 394 aa20.37■□□□□ 0.85
Upf1-201ENSMUST00000075666 Gm1661E9Q963 441 aa20.37■□□□□ 0.85
Upf1-201ENSMUST00000075666 Tmem35bQ3U0Y2 150 aa20.37■□□□□ 0.85
Upf1-201ENSMUST00000075666 Fam183bQ5NC57 135 aa20.37■□□□□ 0.85
Upf1-201ENSMUST00000075666 Cwf19l1Q8CI33 537 aa20.37■□□□□ 0.85
Upf1-201ENSMUST00000075666 Taf6lQ8R2K4 616 aa20.37■□□□□ 0.85
Upf1-201ENSMUST00000075666 Ces1Q8VCC2 565 aa20.37■□□□□ 0.85
Upf1-201ENSMUST00000075666 Gm7356A0A087WSA6 508 aa20.36■□□□□ 0.85
Upf1-201ENSMUST00000075666 Cpb1B2RS76 415 aa20.36■□□□□ 0.85
Upf1-201ENSMUST00000075666 Tdo2P48776 406 aa20.36■□□□□ 0.85
Upf1-201ENSMUST00000075666 Psmc4P54775 418 aa20.36■□□□□ 0.85
Upf1-201ENSMUST00000075666 Q8R1Y2 203 aa20.36■□□□□ 0.85
Upf1-201ENSMUST00000075666 G3bp2P97379 482 aaKnown RBP20.36■□□□□ 0.85
Upf1-201ENSMUST00000075666 Skap1Q3UUV5 355 aa20.36■□□□□ 0.85
Upf1-201ENSMUST00000075666 Map3k7Q62073 579 aa20.36■□□□□ 0.85
Upf1-201ENSMUST00000075666 Krt40Q6IFX3 439 aa20.36■□□□□ 0.85
Upf1-201ENSMUST00000075666 Rhobtb3Q9CTN4 611 aa20.36■□□□□ 0.85
Upf1-201ENSMUST00000075666 DnmbpQ6TXD4 1580 aa20.36■□□□□ 0.85
Upf1-201ENSMUST00000075666 DnttP09838 530 aa20.36■□□□□ 0.85
Upf1-201ENSMUST00000075666 Uhmk1P97343 419 aa20.36■□□□□ 0.85
Upf1-201ENSMUST00000075666 HscbQ8K3A0 234 aa20.36■□□□□ 0.85
Upf1-201ENSMUST00000075666 Tnpo2Q99LG2 887 aaKnown RBP20.36■□□□□ 0.85
Upf1-201ENSMUST00000075666 RargP18911 458 aaKnown RBP20.36■□□□□ 0.85
Upf1-201ENSMUST00000075666 NsfP46460 744 aa20.36■□□□□ 0.85
Upf1-201ENSMUST00000075666 Pwp2Q8BU03 919 aaKnown RBP20.36■□□□□ 0.85
Upf1-201ENSMUST00000075666 Fsd1lQ8BYN5 507 aa20.36■□□□□ 0.85
Upf1-201ENSMUST00000075666 Chn1Q91V57 459 aa20.36■□□□□ 0.85
Upf1-201ENSMUST00000075666 PtprtQ99M80 1454 aa20.36■□□□□ 0.85
Upf1-201ENSMUST00000075666 Taf4E9QAP7 1042 aaKnown RBP20.35■□□□□ 0.85
Upf1-201ENSMUST00000075666 Usp38Q8BW70 1042 aa20.35■□□□□ 0.85
Upf1-201ENSMUST00000075666 Popdc2Q9ES82 367 aa20.35■□□□□ 0.85
Upf1-201ENSMUST00000075666 Kiaa0232Q80U59 1396 aaKnown RBP20.35■□□□□ 0.85
Upf1-201ENSMUST00000075666 Ttc38A3KMP2 465 aa20.35■□□□□ 0.85
Upf1-201ENSMUST00000075666 Nsun2Q1HFZ0 757 aaKnown RBP20.35■□□□□ 0.85
Upf1-201ENSMUST00000075666 Hdac10Q6P3E7 666 aa20.35■□□□□ 0.85
Upf1-201ENSMUST00000075666 Baiap3Q80TT2 1134 aa20.35■□□□□ 0.85
Upf1-201ENSMUST00000075666 Llgl1Q80Y17 1036 aa20.35■□□□□ 0.85
Upf1-201ENSMUST00000075666 Slc26a6Q8CIW6 758 aa20.35■□□□□ 0.85
Upf1-201ENSMUST00000075666 Acot11Q8VHQ9 594 aa20.35■□□□□ 0.85
Upf1-201ENSMUST00000075666 Nlrx1Q3TL44 975 aa20.35■□□□□ 0.85
Upf1-201ENSMUST00000075666 PnocQ64387 187 aa20.35■□□□□ 0.85
Upf1-201ENSMUST00000075666 Gm5622Q810Q0 167 aa20.35■□□□□ 0.85
Upf1-201ENSMUST00000075666 Tlr2Q9QUN7 784 aa20.35■□□□□ 0.85
Upf1-201ENSMUST00000075666 Slc8a3S4R2P9 928 aa20.35■□□□□ 0.85
Upf1-201ENSMUST00000075666 Flot1O08917 428 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Ptpn14Q62130 1189 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Vil1Q62468 827 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Gimap5Q8BWF2 308 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Pck1Q9Z2V4 622 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Gm9774A0A0A6YVU8 407 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Gm3127E9Q9P5 263 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Gm5134E9QAB5 671 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Gm3453K7N724 263 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Prl2c3P04768 224 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Dzip1lQ499E4 774 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Sik1Q60670 779 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Atp6v1e2Q9D593 226 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Cst12Q9DAN8 128 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Hsf3D0VYS2 492 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Actn4P57780 912 aaKnown RBP20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Gm5592Q3V0A6 857 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Syne3Q4FZC9 975 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Sp4Q62445 782 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Appl2Q8K3G9 662 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Tmem47Q9JJG6 181 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Cyp2ab1S4R196 498 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Etnk2A7MCT6 385 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Zfp839E9PUU5 921 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 WhrnQ80VW5 918 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Noc2lQ9WV70 747 aaKnown RBP20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Pcdh11xF6ZNL5 1338 aa20.34■□□□□ 0.85
Upf1-201ENSMUST00000075666 Ccdc138Q0VF22 680 aa20.33■□□□□ 0.85
Upf1-201ENSMUST00000075666 Phf8Q80TJ7 1023 aa20.33■□□□□ 0.85
Upf1-201ENSMUST00000075666 Ccdc169Q8BXX9 214 aa20.33■□□□□ 0.85
Upf1-201ENSMUST00000075666 Tbc1d23Q8K0F1 684 aa20.33■□□□□ 0.85
Upf1-201ENSMUST00000075666 OtoaQ8K561 1137 aa20.33■□□□□ 0.85
Upf1-201ENSMUST00000075666 Pdia6Q922R8 440 aaKnown RBP20.33■□□□□ 0.85
Upf1-201ENSMUST00000075666 4933406M09RikG3XA12 479 aa20.33■□□□□ 0.85
Upf1-201ENSMUST00000075666 Alppl2P24823 529 aa20.33■□□□□ 0.85
Upf1-201ENSMUST00000075666 Cog7Q3UM29 770 aa20.33■□□□□ 0.85
Upf1-201ENSMUST00000075666 PhkbQ7TSH2 1085 aa20.33■□□□□ 0.85
Upf1-201ENSMUST00000075666 Slc17a8Q8BFU8 601 aa20.33■□□□□ 0.85
Upf1-201ENSMUST00000075666 Trap1Q9CQN1 706 aaKnown RBP20.33■□□□□ 0.85
Upf1-201ENSMUST00000075666 Nde1Q9CZA6 344 aa20.33■□□□□ 0.85
Upf1-201ENSMUST00000075666 Krtap5-3Q9D226 196 aa20.33■□□□□ 0.85
Upf1-201ENSMUST00000075666 ArcQ9WV31 396 aa20.33■□□□□ 0.85
Upf1-201ENSMUST00000075666 Zfp94E9Q6Y4 486 aa20.33■□□□□ 0.84
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms