RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Snx14Q8BHY8 964 aa17.62■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Chtf18Q8BIW9 969 aa17.62■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 SetQ9EQU5 289 aaKnown RBP17.62■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 GgcxQ9QYC7 757 aa17.62■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Vcam1P29533 739 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Nr2f2P43135 414 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Rasip1Q3U0S6 961 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Skap2Q3UND0 358 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Ttbk2Q3UVR3 1243 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Pja2Q80U04 707 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Cnot10Q8BH15 744 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Scfd2Q8BTY8 684 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Bud13Q8R149 637 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Ppp1r3aQ99MR9 1089 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Ascc1Q9D8Z1 356 aaKnown RBP17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Atp6v0a2P15920 856 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Nf2P46662 596 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 PltpP55065 493 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Klra9Q2TJJ8 266 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Klhdc9Q3USL1 350 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Naa35Q6PHQ8 725 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Tmc3Q7TQ69 1130 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Phf8Q80TJ7 1023 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Rnf187Q8BFX1 236 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 DcakdQ8BHC4 231 aaKnown RBP17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Cgref1Q8R1U2 281 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 CbsQ91WT9 561 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 VillQ91YD6 859 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Actn2Q9JI91 894 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 EmcnQ9R0H2 261 aa17.61■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Fdx1P46656 188 aa17.6■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Mmp14P53690 582 aa17.6■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Cyp2e1Q05421 493 aa17.6■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Tex11Q14AT2 947 aa17.6■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Sf3b2Q3UJB0 878 aaKnown RBP17.6■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Sycp1Q62209 993 aa17.6■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 PigsQ6PD26 555 aaKnown RBP17.6■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Zbtb39Q6PDK0 712 aa17.6■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Ece2Q80Z60 881 aa17.6■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Anapc4Q91W96 807 aa17.6■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Rbm5Q91YE7 815 aaKnown RBP17.6■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 GzmnQ920S1 248 aa17.6■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 MefvQ9JJ26 767 aa17.6■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Tfr2Q9JKX3 798 aa17.6■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Usp31E9Q6Y8 1344 aa17.59■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Rbm46P86049 533 aa17.59■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 RelaQ04207 549 aa17.59■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Zc3h18Q0P678 948 aaKnown RBP17.59■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Gm5935Q497S0 212 aa17.59■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Zdhhc24Q6IR37 284 aa17.59■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Lrig3Q6P1C6 1117 aa17.59■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Pank4Q80YV4 820 aa17.59■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Armc6Q8BNU0 468 aa17.59■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 IarsQ8BU30 1262 aa17.59■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 PdxkQ8K183 312 aa17.59■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Mettl13Q91YR5 698 aa17.59■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Vwa5aQ99KC8 793 aaKnown RBP17.59■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Rnf34Q99KR6 376 aa17.59■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Saal1Q9D2C2 474 aa17.59■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 NapaQ9DB05 295 aa17.59■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 MycbpQ9EQS3 103 aa17.59■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Nup50Q9JIH2 466 aaKnown RBP17.59■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Add1Q9QYC0 735 aaKnown RBP17.59■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 AurkbO70126 345 aa17.58■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 H2afzP0C0S6 128 aa17.58■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Rpl13P47963 211 aaKnown RBP17.58■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Sox13Q04891 613 aa17.58■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 H2afvQ3THW5 128 aa17.58■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Nlrp2Q4PLS0 1046 aaKnown RBP17.58■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 E2f5Q61502 335 aa17.58■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Hdac10Q6P3E7 666 aa17.58■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Actn1Q7TPR4 892 aaKnown RBP17.58■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Ublcp1Q8BGR9 318 aa17.58■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Klhl7Q8BUL5 586 aa17.58■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Ccdc28aQ8CEI3 192 aa17.58■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Slc12a6Q924N4 1150 aa17.58■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 PpihQ9D868 188 aa17.58■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Rexo2Q9D8S4 237 aa17.58■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 Gkap1Q9JMB0 366 aa17.58■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 SmapQ9R0P4 181 aaKnown RBP17.58■□□□□ 0.41
Ttc39b-202ENSMUST00000048274 4930523C07RikE9Q2T4 99 aa17.58■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Rnaseh1O70338 285 aa17.58■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Tp53P02340 387 aa17.58■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Myo1fP70248 1099 aa17.58■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Fam107bQ3TGF2 131 aa17.58■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Qrich1Q3UA37 777 aa17.58■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Oxr1Q4KMM3 866 aa17.58■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Cacna2d4Q5RJF7 1116 aa17.58■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Nell2Q61220 819 aa17.58■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Tsga10Q6NY15 697 aa17.58■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 KhnynQ80U38 671 aa17.58■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Rab11fip4Q8BQP8 635 aa17.58■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Ccdc15Q8C9M2 810 aa17.58■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Ces1Q8VCC2 565 aa17.58■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Pcdhb5Q91XZ5 792 aa17.58■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 3830403N18RikQ9D6C3 208 aa17.58■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 Dydc1Q9D9T0 175 aa17.58■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 EporP14753 507 aa17.57■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 PrphP15331 475 aa17.57■□□□□ 0.4
Ttc39b-202ENSMUST00000048274 RxrbP28704 520 aa17.57■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms