RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 FtoQ8BGW1 502 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 6820408C15RikQ8BJX2 354 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 C2cd5Q7TPS5 1016 aaKnown RBP10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 AsphQ8BSY0 741 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Pus7lQ8CE46 702 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Rnf6Q9DBU5 667 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 C1qtnf1Q9QXP7 281 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ubxn8Q9QZ49 277 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 4933406M09RikG3XA12 479 aa10.9□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Trim43cP86449 446 aa10.9□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Sap30bpQ02614 308 aa10.9□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Sestd1Q80UK0 696 aa10.9□□□□□ -0.67
Ubr1-201ENSMUST00000028728 MyripQ8K3I4 856 aa10.9□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Tfap4Q9JIZ5 338 aa10.9□□□□□ -0.67
Ubr1-201ENSMUST00000028728 6030498E09RikB1AX85 169 aa10.9□□□□□ -0.67
Ubr1-201ENSMUST00000028728 GpiP06745 558 aaKnown RBP10.9□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Lrrc4bP0C192 709 aa10.9□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Tac1P41539 130 aa10.9□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Map2k2Q63932 401 aa10.9□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Sec23ipQ6NZC7 998 aa10.9□□□□□ -0.67
Ubr1-201ENSMUST00000028728 NfrkbQ6PIJ4 1296 aaKnown RBP10.9□□□□□ -0.67
Ubr1-201ENSMUST00000028728 PhkbQ7TSH2 1085 aa10.9□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Serpina9Q9D7D2 418 aa10.9□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Pard6bQ9JK83 371 aa10.9□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Large1Q9Z1M7 756 aa10.9□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Krt86P97861 486 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Tmem109Q3UBX0 243 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ccdc151Q8BSN3 593 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Snf8Q9CZ28 258 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Gm43738A0A0G2JEA5 862 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 DgkkE9Q7N4 1118 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 LRWD1Q8BUI3 648 aaKnown RBP10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Hps4Q99KG7 671 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Aldh18a1Q9Z110 795 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Arhgap23Q69ZH9 1483 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Lrrc32G3XA59 663 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Vmn2r71L7N2D8 855 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 CflarO35732 481 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Exosc10P56960 887 aaKnown RBP10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 PtgdrP70263 357 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Kcnd1Q03719 651 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ctdnep1Q3TP92 244 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ttll4Q80UG8 1193 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Terb1Q8C0V1 768 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Leng8Q8CBY3 785 aaKnown RBP10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Mtmr7Q9Z2C9 660 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Kiaa1551Q5DTW7 1521 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Rsrc2A2RTL5 376 aaKnown RBP10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Hmx1O70218 332 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Tex11Q14AT2 947 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 DeptorQ570Y9 409 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 BcrQ6PAJ1 1270 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Nme8Q715T0 586 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Slf1Q8R3P9 1054 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 RtcbQ99LF4 505 aaKnown RBP10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Gm20721E9Q2U8 318 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ddb1Q3U1J4 1140 aaKnown RBP10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Lrig2Q52KR2 1054 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Eme2Q56A04 373 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Zbtb17Q60821 794 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Q80ZQ3 298 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Trim52Q8CDV4 233 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Appl2Q8K3G9 662 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Med21Q9CQ39 144 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Adamts12Q811B3 1600 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 FancaQ9JL70 1439 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Cdc27A2A6Q5 825 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Gbp4A4UUI3 631 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Cyp11b2P15539 500 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ino80dQ66JY2 873 aaKnown RBP10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Adat2Q6P6J0 191 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Lrrc1Q80VQ1 524 aa10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Pbrm1Q8BSQ9 1634 aaKnown RBP10.89□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Scg2Q03517 617 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Plcg2Q8CIH5 1265 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 BaatQ91X34 420 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Scrn1Q9CZC8 414 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Tlr2Q9QUN7 784 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Il15P48346 162 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Fbxo11Q7TPD1 930 aaKnown RBP10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Aldh5a1Q8BWF0 523 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Prpsap2Q8R574 369 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Med10Q9CXU0 135 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Cep170Q6A065 1588 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Vmn2r23E9PXI5 849 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Phldb3E9QAF4 648 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Zfp408H7BX78 710 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Sec31aQ3UPL0 1230 aaKnown RBP10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ano8Q6PB70 1060 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ddx19bQ8BZY3 494 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 PaoxQ8C0L6 504 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 SmtnQ921U8 923 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Rhobtb1Q9DAK3 695 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Gm29133A0A1B0GT72 266 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 DohhA0A1Y7VJ29 135 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Gpr182P43142 395 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Idi1P58044 227 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Inpp5bQ8K337 993 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Krt4P07744 525 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Rps8P62242 208 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms