RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W ATX2Q12067 313 aa4.76□□□□□ -1.65
UBC6YER100W CRC1Q12289 327 aa4.76□□□□□ -1.65
UBC6YER100W ORT1Q12375 292 aa4.76□□□□□ -1.65
UBC6YER100W LSB5P25369 354 aa4.75□□□□□ -1.65
UBC6YER100W MGR1P25573 417 aa4.75□□□□□ -1.65
UBC6YER100W ACH1P32316 526 aa4.75□□□□□ -1.65
UBC6YER100W FRE1P32791 686 aa4.75□□□□□ -1.65
UBC6YER100W SMC2P38989 1170 aaKnown RBP4.75□□□□□ -1.65
UBC6YER100W ISC1P40015 477 aaKnown RBP4.75□□□□□ -1.65
UBC6YER100W LCP5P40079 357 aaPredicted RBP4.75□□□□□ -1.65
UBC6YER100W HMS2P47175 358 aa4.75□□□□□ -1.65
UBC6YER100W PMT5P52867 743 aa4.75□□□□□ -1.65
UBC6YER100W IRC15Q02733 499 aa4.75□□□□□ -1.65
UBC6YER100W STD1Q02794 444 aa4.75□□□□□ -1.65
UBC6YER100W RRN5Q02983 363 aa4.75□□□□□ -1.65
UBC6YER100W RLI1Q03195 608 aaKnown RBP4.75□□□□□ -1.65
UBC6YER100W RSN1Q03516 953 aa4.75□□□□□ -1.65
UBC6YER100W GRX3Q03835 250 aa4.75□□□□□ -1.65
UBC6YER100W YMR087WQ04299 284 aa4.75□□□□□ -1.65
UBC6YER100W ECM18Q04623 453 aa4.75□□□□□ -1.65
UBC6YER100W KAP95Q06142 861 aaKnown RBP4.75□□□□□ -1.65
UBC6YER100W ECM7Q06200 448 aa4.75□□□□□ -1.65
UBC6YER100W YDL009CQ12210 107 aa4.75□□□□□ -1.65
UBC6YER100W CEX1Q12453 761 aa4.75□□□□□ -1.65
UBC6YER100W PGK1P00560 416 aaKnown RBP4.74□□□□□ -1.65
UBC6YER100W HOM2P13663 365 aaKnown RBP4.74□□□□□ -1.65
UBC6YER100W HXT2P23585 541 aa4.74□□□□□ -1.65
UBC6YER100W MSK1P32048 576 aa4.74□□□□□ -1.65
UBC6YER100W PPZ2P33329 710 aa4.74□□□□□ -1.65
UBC6YER100W SKN1P33336 771 aa4.74□□□□□ -1.65
UBC6YER100W PTK1P36002 662 aaPredicted RBP4.74□□□□□ -1.65
UBC6YER100W YNK1P36010 153 aaKnown RBP4.74□□□□□ -1.65
UBC6YER100W YCR041WP37265 110 aa4.74□□□□□ -1.65
UBC6YER100W TIF5P38431 405 aaKnown RBP4.74□□□□□ -1.65
UBC6YER100W AIM20P40451 204 aa4.74□□□□□ -1.65
UBC6YER100W YIL024CP40543 189 aa4.74□□□□□ -1.65
UBC6YER100W STE24P47154 453 aa4.74□□□□□ -1.65
UBC6YER100W YGL114WP53134 725 aa4.74□□□□□ -1.65
UBC6YER100W YNR048WP53740 393 aa4.74□□□□□ -1.65
UBC6YER100W ODC1Q03028 310 aa4.74□□□□□ -1.65
UBC6YER100W SPO19Q03029 223 aa4.74□□□□□ -1.65
UBC6YER100W IZH1Q03419 316 aa4.74□□□□□ -1.65
UBC6YER100W NRT1Q08485 598 aa4.74□□□□□ -1.65
UBC6YER100W SRL2Q12020 392 aa4.74□□□□□ -1.65
UBC6YER100W BSC1Q12140 328 aa4.74□□□□□ -1.65
UBC6YER100W PKH2Q12236 1081 aaKnown RBP4.74□□□□□ -1.65
UBC6YER100W YOR012WQ12351 137 aa4.74□□□□□ -1.65
UBC6YER100W ARG4P04076 463 aaPredicted RBP4.73□□□□□ -1.65
UBC6YER100W YAR066WP0CX18 203 aa4.73□□□□□ -1.65
UBC6YER100W YHR214WP0CX19 203 aa4.73□□□□□ -1.65
UBC6YER100W YER190C-BP0CX94 160 aa4.73□□□□□ -1.65
UBC6YER100W YEL077W-AP0CX95 160 aa4.73□□□□□ -1.65
UBC6YER100W YGR296C-BP0CX96 160 aa4.73□□□□□ -1.65
UBC6YER100W YPL283W-BP0CX97 160 aa4.73□□□□□ -1.65
UBC6YER100W YPR204C-AP0CX98 160 aa4.73□□□□□ -1.65
UBC6YER100W ARF1P11076 181 aaKnown RBP4.73□□□□□ -1.65
UBC6YER100W MAS2P11914 482 aa4.73□□□□□ -1.65
UBC6YER100W SEC62P21825 274 aa4.73□□□□□ -1.65
UBC6YER100W AIM17P23180 465 aaKnown RBP4.73□□□□□ -1.65
UBC6YER100W SLM5P25345 492 aaKnown RBP4.73□□□□□ -1.65
UBC6YER100W EFB1P32471 206 aaKnown RBP4.73□□□□□ -1.65
UBC6YER100W IME2P32581 645 aa4.73□□□□□ -1.65
UBC6YER100W RSM22P36056 628 aa4.73□□□□□ -1.65
UBC6YER100W PEX18P38855 283 aa4.73□□□□□ -1.65
UBC6YER100W MMF1P40185 145 aaKnown RBP4.73□□□□□ -1.65
UBC6YER100W YMR134WP40207 237 aa4.73□□□□□ -1.65
UBC6YER100W ATM1P40416 690 aa4.73□□□□□ -1.65
UBC6YER100W GAT1P43574 510 aa4.73□□□□□ -1.65
UBC6YER100W YDL186WP48568 277 aa4.73□□□□□ -1.65
UBC6YER100W YNL146WP53906 100 aa4.73□□□□□ -1.65
UBC6YER100W ESBP6P53918 673 aa4.73□□□□□ -1.65
UBC6YER100W MPS1P54199 764 aa4.73□□□□□ -1.65
UBC6YER100W ERV41Q04651 352 aa4.73□□□□□ -1.65
UBC6YER100W YEH2Q07950 538 aa4.73□□□□□ -1.65
UBC6YER100W YDR262WQ12331 272 aa4.73□□□□□ -1.65
UBC6YER100W AIM45Q12480 344 aaKnown RBP4.73□□□□□ -1.65
UBC6YER100W RNA1P11745 407 aaKnown RBP4.72□□□□□ -1.65
UBC6YER100W YAP1P19880 650 aaKnown RBP4.72□□□□□ -1.65
UBC6YER100W YCR100CP25606 316 aa4.72□□□□□ -1.65
UBC6YER100W TOA2P32774 122 aa4.72□□□□□ -1.65
UBC6YER100W FRE2P36033 711 aa4.72□□□□□ -1.65
UBC6YER100W SWC5P38326 303 aa4.72□□□□□ -1.65
UBC6YER100W RRP3P38712 501 aaKnown RBP4.72□□□□□ -1.65
UBC6YER100W PET100P38958 111 aa4.72□□□□□ -1.65
UBC6YER100W ALP1P38971 573 aa4.72□□□□□ -1.65
UBC6YER100W END3P39013 349 aa4.72□□□□□ -1.65
UBC6YER100W CDC40P40968 455 aaPredicted RBP4.72□□□□□ -1.65
UBC6YER100W SSN8P47821 323 aa4.72□□□□□ -1.65
UBC6YER100W TDA7P53882 636 aaPredicted RBP4.72□□□□□ -1.65
UBC6YER100W CAB5Q03941 241 aa4.72□□□□□ -1.65
UBC6YER100W RRG8Q06109 277 aa4.72□□□□□ -1.65
UBC6YER100W BNR1P40450 1375 aa4.71□□□□□ -1.66
UBC6YER100W OPI3P05375 206 aa4.71□□□□□ -1.66
UBC6YER100W SPO12P17123 173 aa4.71□□□□□ -1.66
UBC6YER100W SAR1P20606 190 aaKnown RBP4.71□□□□□ -1.66
UBC6YER100W DOA1P36037 715 aa4.71□□□□□ -1.66
UBC6YER100W SNL1P40548 159 aa4.71□□□□□ -1.66
UBC6YER100W GCD14P46959 383 aaPredicted RBP4.71□□□□□ -1.66
UBC6YER100W YHC3P47040 408 aa4.71□□□□□ -1.66
UBC6YER100W LOH1P47055 219 aa4.71□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms