RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 PSMC6P62333 389 aa18.29■□□□□ 0.52
PHGDH-216ENST00000641375 PABPC4Q13310 644 aaKnown RBP eCLIP18.29■□□□□ 0.529e-7■■■■□ 21.6
PHGDH-216ENST00000641375 PLS1Q14651 629 aa18.29■□□□□ 0.52
PHGDH-216ENST00000641375 TREML2Q5T2D2 321 aa18.29■□□□□ 0.52
PHGDH-216ENST00000641375 CNKSR2Q8WXI2 1034 aa18.29■□□□□ 0.52
PHGDH-216ENST00000641375 UNC45AQ9H3U1 944 aa18.29■□□□□ 0.52
PHGDH-216ENST00000641375 TBC1D22BQ9NU19 505 aa18.29■□□□□ 0.52
PHGDH-216ENST00000641375 RGL1Q9NZL6 768 aa18.29■□□□□ 0.52
PHGDH-216ENST00000641375 PYCARDQ9ULZ3 195 aa18.29■□□□□ 0.52
PHGDH-216ENST00000641375 A0A0G2JMZ2 1700 aa18.28■□□□□ 0.52
PHGDH-216ENST00000641375 NOLC1Q14978 699 aaKnown RBP eCLIP18.28■□□□□ 0.52
PHGDH-216ENST00000641375 KRT31Q15323 416 aa18.28■□□□□ 0.52
PHGDH-216ENST00000641375 CENPPQ6IPU0 288 aa18.28■□□□□ 0.52
PHGDH-216ENST00000641375 FOXR2Q6PJQ5 311 aa18.28■□□□□ 0.52
PHGDH-216ENST00000641375 ILDR2Q71H61 639 aa18.28■□□□□ 0.52
PHGDH-216ENST00000641375 FAM114A1Q8IWE2 563 aa18.28■□□□□ 0.52
PHGDH-216ENST00000641375 CSGALNACT2Q8N6G5 542 aa18.28■□□□□ 0.52
PHGDH-216ENST00000641375 NSUN6Q8TEA1 469 aaKnown RBP18.28■□□□□ 0.52
PHGDH-216ENST00000641375 HPS3Q969F9 1004 aa18.28■□□□□ 0.52
PHGDH-216ENST00000641375 SRRTQ9BXP5 876 aaKnown RBP18.28■□□□□ 0.52
PHGDH-216ENST00000641375 AGO4Q9HCK5 861 aaKnown RBP18.28■□□□□ 0.52
PHGDH-216ENST00000641375 FRMD3A2A2Y4 597 aa18.28■□□□□ 0.52
PHGDH-216ENST00000641375 KIF20AO95235 890 aa18.28■□□□□ 0.52
PHGDH-216ENST00000641375 MYCLP12524 364 aaPredicted RBP18.28■□□□□ 0.52
PHGDH-216ENST00000641375 CCND2P30279 289 aa18.28■□□□□ 0.52
PHGDH-216ENST00000641375 PPIL2Q13356 520 aa18.28■□□□□ 0.52
PHGDH-216ENST00000641375 ARID5BQ14865 1188 aa18.28■□□□□ 0.52
PHGDH-216ENST00000641375 FAM26FQ5R3K3 315 aa18.28■□□□□ 0.52
PHGDH-216ENST00000641375 LBX2Q6XYB7 198 aa18.28■□□□□ 0.52
PHGDH-216ENST00000641375 GADL1Q6ZQY3 521 aa18.28■□□□□ 0.52
PHGDH-216ENST00000641375 TPH2Q8IWU9 490 aa18.28■□□□□ 0.52
PHGDH-216ENST00000641375 CHST13Q8NET6 341 aa18.28■□□□□ 0.52
PHGDH-216ENST00000641375 DYDC2Q96IM9 177 aa18.28■□□□□ 0.52
PHGDH-216ENST00000641375 MAGEC2Q9UBF1 373 aaPredicted RBP18.28■□□□□ 0.52
PHGDH-216ENST00000641375 MAFGO15525 162 aa18.27■□□□□ 0.52
PHGDH-216ENST00000641375 OFD1O75665 1012 aa18.27■□□□□ 0.52
PHGDH-216ENST00000641375 SKILP12757 684 aa18.27■□□□□ 0.52
PHGDH-216ENST00000641375 LRRC63Q05C16 580 aa18.27■□□□□ 0.52
PHGDH-216ENST00000641375 CTTNQ14247 550 aaKnown RBP18.27■□□□□ 0.52
PHGDH-216ENST00000641375 ARSHQ5FYA8 562 aa18.27■□□□□ 0.52
PHGDH-216ENST00000641375 ANKRD40Q6AI12 368 aa18.27■□□□□ 0.52
PHGDH-216ENST00000641375 ARMCX5Q6P1M9 558 aa18.27■□□□□ 0.52
PHGDH-216ENST00000641375 SMAP1Q8IYB5 467 aaPredicted RBP18.27■□□□□ 0.52
PHGDH-216ENST00000641375 CLMNQ96JQ2 1002 aa18.27■□□□□ 0.52
PHGDH-216ENST00000641375 NACC1Q96RE7 527 aa18.27■□□□□ 0.52
PHGDH-216ENST00000641375 BHMT2Q9H2M3 363 aa18.27■□□□□ 0.52
PHGDH-216ENST00000641375 CYP39A1Q9NYL5 469 aa18.27■□□□□ 0.52
PHGDH-216ENST00000641375 KCNH4Q9UQ05 1017 aa18.27■□□□□ 0.52
PHGDH-216ENST00000641375 N4BP3O15049 544 aa18.27■□□□□ 0.51
PHGDH-216ENST00000641375 VSIG10LQ86VR7 867 aa18.27■□□□□ 0.51
PHGDH-216ENST00000641375 MYOCDQ8IZQ8 938 aa18.27■□□□□ 0.51
PHGDH-216ENST00000641375 DUSP9Q99956 384 aaKnown RBP18.27■□□□□ 0.51
PHGDH-216ENST00000641375 A1CFQ9NQ94 594 aaKnown RBP18.27■□□□□ 0.51
PHGDH-216ENST00000641375 SPTLC3Q9NUV7 552 aa18.27■□□□□ 0.51
PHGDH-216ENST00000641375 FBXO40Q9UH90 709 aa18.27■□□□□ 0.51
PHGDH-216ENST00000641375 DHX15O43143 795 aaKnown RBP18.26■□□□□ 0.51
PHGDH-216ENST00000641375 FGFR1OPO95684 399 aaKnown RBP18.26■□□□□ 0.51
PHGDH-216ENST00000641375 NR3C2P08235 984 aa18.26■□□□□ 0.51
PHGDH-216ENST00000641375 COPB1P53618 953 aaKnown RBP18.26■□□□□ 0.51
PHGDH-216ENST00000641375 IRX3P78415 501 aaPredicted RBP18.26■□□□□ 0.51
PHGDH-216ENST00000641375 CCZ1BP86790 482 aa18.26■□□□□ 0.51
PHGDH-216ENST00000641375 CCZ1P86791 482 aaPredicted RBP18.26■□□□□ 0.51
PHGDH-216ENST00000641375 GIT2Q14161 759 aa18.26■□□□□ 0.51
PHGDH-216ENST00000641375 HERC4Q5GLZ8 1057 aaPredicted RBP18.26■□□□□ 0.51
PHGDH-216ENST00000641375 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.26■□□□□ 0.51
PHGDH-216ENST00000641375 MIER3Q7Z3K6 550 aa18.26■□□□□ 0.51
PHGDH-216ENST00000641375 IRF2BP1Q8IU81 584 aa18.26■□□□□ 0.51
PHGDH-216ENST00000641375 STAM2O75886 525 aa18.25■□□□□ 0.51
PHGDH-216ENST00000641375 TBX2Q13207 712 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-216ENST00000641375 MOB2Q70IA6 237 aa18.25■□□□□ 0.51
PHGDH-216ENST00000641375 CREBRFQ8IUR6 639 aa18.25■□□□□ 0.51
PHGDH-216ENST00000641375 CCDC112Q8NEF3 446 aa18.25■□□□□ 0.51
PHGDH-216ENST00000641375 GPRASP2Q96D09 838 aa18.25■□□□□ 0.51
PHGDH-216ENST00000641375 TSG101Q99816 390 aa18.25■□□□□ 0.51
PHGDH-216ENST00000641375 SEMA6BQ9H3T3 888 aa18.25■□□□□ 0.51
PHGDH-216ENST00000641375 KCND2Q9NZV8 630 aa18.25■□□□□ 0.51
PHGDH-216ENST00000641375 TESPA1A2RU30 521 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-216ENST00000641375 TEX33O43247 280 aa18.25■□□□□ 0.51
PHGDH-216ENST00000641375 ITGB3BPQ13352 177 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-216ENST00000641375 FASTKD5Q7L8L6 764 aaKnown RBP18.25■□□□□ 0.51
PHGDH-216ENST00000641375 NLRX1Q86UT6 975 aa18.25■□□□□ 0.51
PHGDH-216ENST00000641375 LXNQ9BS40 222 aa18.25■□□□□ 0.51
PHGDH-216ENST00000641375 TCEAL9Q9UHQ7 104 aa18.25■□□□□ 0.51
PHGDH-216ENST00000641375 AGTPBP1Q9UPW5 1226 aa18.25■□□□□ 0.51
PHGDH-216ENST00000641375 PCDHA2Q9Y5H9 948 aa18.25■□□□□ 0.51
PHGDH-216ENST00000641375 NPHP3-ACAD11A0A0J9YXS1 232 aa18.24■□□□□ 0.51
PHGDH-216ENST00000641375 UNCXA6NJT0 531 aa18.24■□□□□ 0.51
PHGDH-216ENST00000641375 P4HBP07237 508 aaKnown RBP18.24■□□□□ 0.51
PHGDH-216ENST00000641375 PBX1P40424 430 aa18.24■□□□□ 0.51
PHGDH-216ENST00000641375 MTERF4Q7Z6M4 381 aaKnown RBP18.24■□□□□ 0.51
PHGDH-216ENST00000641375 RIOX2Q8IUF8 465 aa18.24■□□□□ 0.51
PHGDH-216ENST00000641375 PIGOQ8TEQ8 1089 aa18.24■□□□□ 0.51
PHGDH-216ENST00000641375 OPTNQ96CV9 577 aa18.24■□□□□ 0.51
PHGDH-216ENST00000641375 PURBQ96QR8 312 aaKnown RBP18.24■□□□□ 0.51
PHGDH-216ENST00000641375 REEP2Q9BRK0 252 aa18.24■□□□□ 0.51
PHGDH-216ENST00000641375 PKD2L1Q9P0L9 805 aa18.24■□□□□ 0.51
PHGDH-216ENST00000641375 PFASO15067 1338 aa18.24■□□□□ 0.51
PHGDH-216ENST00000641375 ITIH6Q6UXX5 1313 aa18.24■□□□□ 0.51
PHGDH-216ENST00000641375 DDX39AO00148 427 aaKnown RBP18.24■□□□□ 0.51
PHGDH-216ENST00000641375 RAD51AP2Q09MP3 1159 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms