RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-238ENST00000640859 BEGAINQ9BUH8 593 aa12.52□□□□□ -0.41
GFAP-238ENST00000640859 NAA15Q9BXJ9 866 aaKnown RBP12.52□□□□□ -0.41
GFAP-238ENST00000640859 PPP2R2CQ9Y2T4 447 aa12.52□□□□□ -0.41
GFAP-238ENST00000640859 PCDHA2Q9Y5H9 948 aa12.52□□□□□ -0.41
GFAP-238ENST00000640859 POTEFA5A3E0 1075 aa12.51□□□□□ -0.41
GFAP-238ENST00000640859 RASSF10A6NK89 507 aa12.51□□□□□ -0.41
GFAP-238ENST00000640859 RNF225M0QZC1 329 aaPredicted RBP12.51□□□□□ -0.41
GFAP-238ENST00000640859 EML1O00423 815 aa12.51□□□□□ -0.41
GFAP-238ENST00000640859 ZSCAN12O43309 604 aa12.51□□□□□ -0.41
GFAP-238ENST00000640859 USP2O75604 605 aaPredicted RBP12.51□□□□□ -0.41
GFAP-238ENST00000640859 PSMD10O75832 226 aa12.51□□□□□ -0.41
GFAP-238ENST00000640859 SSBP05455 408 aaKnown RBP eCLIP12.51□□□□□ -0.41
GFAP-238ENST00000640859 DNM2P50570 870 aa12.51□□□□□ -0.41
GFAP-238ENST00000640859 ARSHQ5FYA8 562 aa12.51□□□□□ -0.41
GFAP-238ENST00000640859 FAM26FQ5R3K3 315 aa12.51□□□□□ -0.41
GFAP-238ENST00000640859 POTEGQ6S5H5 508 aa12.51□□□□□ -0.41
GFAP-238ENST00000640859 POTEEQ6S8J3 1075 aa12.51□□□□□ -0.41
GFAP-238ENST00000640859 CREBRFQ8IUR6 639 aa12.51□□□□□ -0.41
GFAP-238ENST00000640859 CCDC65Q8IXS2 484 aa12.51□□□□□ -0.41
GFAP-238ENST00000640859 SYT2Q8N9I0 419 aaPredicted RBP12.51□□□□□ -0.41
GFAP-238ENST00000640859 CLEC4DQ8WXI8 215 aa12.51□□□□□ -0.41
GFAP-238ENST00000640859 CNOT6LQ96LI5 555 aaKnown RBP12.51□□□□□ -0.41
GFAP-238ENST00000640859 AGBL1Q96MI9 1066 aa12.51□□□□□ -0.41
GFAP-238ENST00000640859 TUBGCP2Q9BSJ2 902 aa12.51□□□□□ -0.41
GFAP-238ENST00000640859 EMILIN3Q9NT22 766 aa12.51□□□□□ -0.41
GFAP-238ENST00000640859 CCPG1Q9ULG6 757 aa12.51□□□□□ -0.41
GFAP-238ENST00000640859 RPTORQ8N122 1335 aa12.51□□□□□ -0.41
GFAP-238ENST00000640859 NPHP3-ACAD11A0A0J9YXS1 232 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 MEIS1O00470 390 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 CTIFO43310 598 aaKnown RBP12.5□□□□□ -0.41
GFAP-238ENST00000640859 FGFR1OPO95684 399 aaKnown RBP12.5□□□□□ -0.41
GFAP-238ENST00000640859 TPM1P09493 284 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 PSMC6P62333 389 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 LRRC63Q05C16 580 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 PPP2R5CQ13362 524 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 LRRC41Q15345 812 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 ZCWPW2Q504Y3 356 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 MIIPQ5JXC2 388 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 TRIM65Q6PJ69 517 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 RAD9BQ6WBX8 426 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 TOGARAM2Q6ZUX3 1019 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 OTOP1Q7RTM1 612 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 ERO1BQ86YB8 467 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 MYOCDQ8IZQ8 938 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 SAMD3Q8N6K7 520 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 GLIS3Q8NEA6 775 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.5□□□□□ -0.41
GFAP-238ENST00000640859 KIF18AQ8NI77 898 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 ZNF592Q92610 1267 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 EIF2AK1Q9BQI3 630 aaKnown RBP12.5□□□□□ -0.41
GFAP-238ENST00000640859 AS3MTQ9HBK9 375 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 SLC38A10Q9HBR0 1119 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 DNM3Q9UQ16 869 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 RABGAP1Q9Y3P9 1069 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 RBBP6Q7Z6E9 1792 aaKnown RBP12.5□□□□□ -0.41
GFAP-238ENST00000640859 PAPPA2Q9BXP8 1791 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 PARP14Q460N5 1801 aa12.5□□□□□ -0.41
GFAP-238ENST00000640859 PHIPQ8WWQ0 1821 aa12.49□□□□□ -0.41
GFAP-238ENST00000640859 GOLGA6L9A6NEM1 432 aa12.49□□□□□ -0.41
GFAP-238ENST00000640859 EYA4O95677 639 aa12.49□□□□□ -0.41
GFAP-238ENST00000640859 ZBTB48P10074 688 aaPredicted RBP12.49□□□□□ -0.41
GFAP-238ENST00000640859 PYGBP11216 843 aa12.49□□□□□ -0.41
GFAP-238ENST00000640859 MTIF2P46199 727 aaKnown RBP12.49□□□□□ -0.41
GFAP-238ENST00000640859 USP14P54578 494 aa12.49□□□□□ -0.41
GFAP-238ENST00000640859 ETF1P62495 437 aaKnown RBP12.49□□□□□ -0.41
GFAP-238ENST00000640859 SREBF2Q12772 1141 aa12.49□□□□□ -0.41
GFAP-238ENST00000640859 GIT2Q14161 759 aa12.49□□□□□ -0.41
GFAP-238ENST00000640859 CEP55Q53EZ4 464 aa12.49□□□□□ -0.41
GFAP-238ENST00000640859 LDLRAD1Q5T700 205 aa12.49□□□□□ -0.41
GFAP-238ENST00000640859 B3GNT9Q6UX72 402 aa12.49□□□□□ -0.41
GFAP-238ENST00000640859 LRRC55Q6ZSA7 311 aa12.49□□□□□ -0.41
GFAP-238ENST00000640859 MCF2L2Q86YR7 1114 aa12.49□□□□□ -0.41
GFAP-238ENST00000640859 TMTC1Q8IUR5 882 aa12.49□□□□□ -0.41
GFAP-238ENST00000640859 SCYL3Q8IZE3 742 aa12.49□□□□□ -0.41
GFAP-238ENST00000640859 CAPNS2Q96L46 248 aa12.49□□□□□ -0.41
GFAP-238ENST00000640859 ERGIC2Q96RQ1 377 aa12.49□□□□□ -0.41
GFAP-238ENST00000640859 TSG101Q99816 390 aa12.49□□□□□ -0.41
GFAP-238ENST00000640859 HSD17B14Q9BPX1 270 aa12.49□□□□□ -0.41
GFAP-238ENST00000640859 MXRA8Q9BRK3 442 aa12.49□□□□□ -0.41
GFAP-238ENST00000640859 TUFT1Q9NNX1 390 aa12.49□□□□□ -0.41
GFAP-238ENST00000640859 PPP1R9AQ9ULJ8 1098 aa12.49□□□□□ -0.41
GFAP-238ENST00000640859 SOWAHDA6NJG2 315 aa12.48□□□□□ -0.41
GFAP-238ENST00000640859 B4DLN1 442 aa12.48□□□□□ -0.41
GFAP-238ENST00000640859 FDX1P10109 184 aa12.48□□□□□ -0.41
GFAP-238ENST00000640859 ARP10275 920 aa12.48□□□□□ -0.41
GFAP-238ENST00000640859 PRKCSHP14314 528 aaPredicted RBP12.48□□□□□ -0.41
GFAP-238ENST00000640859 VCAM1P19320 739 aa12.48□□□□□ -0.41
GFAP-238ENST00000640859 MUTP22033 750 aa12.48□□□□□ -0.41
GFAP-238ENST00000640859 KRT9P35527 623 aa12.48□□□□□ -0.41
GFAP-238ENST00000640859 MAP2K2P36507 400 aa12.48□□□□□ -0.41
GFAP-238ENST00000640859 INHBEP58166 350 aa12.48□□□□□ -0.41
GFAP-238ENST00000640859 UBXN2AP68543 259 aa12.48□□□□□ -0.41
GFAP-238ENST00000640859 PPATQ06203 517 aa12.48□□□□□ -0.41
GFAP-238ENST00000640859 TBC1D8BQ0IIM8 1120 aa12.48□□□□□ -0.41
GFAP-238ENST00000640859 PABPC4Q13310 644 aaKnown RBP eCLIP12.48□□□□□ -0.41
GFAP-238ENST00000640859 VGLL4Q14135 290 aa12.48□□□□□ -0.41
GFAP-238ENST00000640859 MTF1Q14872 753 aa12.48□□□□□ -0.41
GFAP-238ENST00000640859 HERC4Q5GLZ8 1057 aaPredicted RBP12.48□□□□□ -0.41
GFAP-238ENST00000640859 LRCH2Q5VUJ6 765 aa12.48□□□□□ -0.41
GFAP-238ENST00000640859 SYT10Q6XYQ8 523 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms