RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 MAGEC3Q8TD91 643 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 UBLCP1Q8WVY7 318 aaPredicted RBP6.18□□□□□ -1.42
SCARB2-218ENST00000639715 PAGE5Q96GU1 130 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 MPHOSPH6Q99547 160 aaKnown RBP6.18□□□□□ -1.42
SCARB2-218ENST00000639715 NT5C3AQ9H0P0 336 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 SEC31BQ9NQW1 1179 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 SH3GLB2Q9NR46 395 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 GJB4Q9NTQ9 266 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 GGA1Q9UJY5 639 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 PCDHA4Q9UN74 947 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 TSC22D4Q9Y3Q8 395 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 SMCO2A6NFE2 343 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 CYP19A1P11511 503 aaPredicted RBP6.17□□□□□ -1.42
SCARB2-218ENST00000639715 FDPSP14324 419 aaKnown RBP6.17□□□□□ -1.42
SCARB2-218ENST00000639715 RAD23BP54727 409 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 SHC4Q6S5L8 630 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 NEK8Q86SG6 692 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 DAAM2Q86T65 1068 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 VSIG1Q86XK7 387 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 DGKHQ86XP1 1220 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 ATP11CQ8NB49 1132 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 ARL8AQ96BM9 186 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 CLMNQ96JQ2 1002 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 PLVAPQ9BX97 442 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 SAMSN1Q9NSI8 373 aaKnown RBP6.17□□□□□ -1.42
SCARB2-218ENST00000639715 FAF1Q9UNN5 650 aaPredicted RBP6.17□□□□□ -1.42
SCARB2-218ENST00000639715 UBN2Q6ZU65 1347 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 KNDC1Q76NI1 1749 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 GSG1L2A8MUP6 293 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 KLRF2D3W0D1 207 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 H0Y3Z8 333 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 ZSCAN9O15535 394 aaPredicted RBP6.17□□□□□ -1.42
SCARB2-218ENST00000639715 UFL1O94874 794 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 CDC27P30260 824 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 RBL2Q08999 1139 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 DMPKQ09013 629 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 PICALMQ13492 652 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 SCARF1Q14162 830 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 PPP1R15BQ5SWA1 713 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 SUSD4Q5VX71 490 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 HS2ST1Q7LGA3 356 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 APLFQ8IW19 511 aaPredicted RBP6.17□□□□□ -1.42
SCARB2-218ENST00000639715 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.17□□□□□ -1.42
SCARB2-218ENST00000639715 SNX29Q8TEQ0 813 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 SEC16BQ96JE7 1060 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 EYA3Q99504 573 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 DDX23Q9BUQ8 820 aaKnown RBP6.17□□□□□ -1.42
SCARB2-218ENST00000639715 RANBP17Q9H2T7 1088 aaKnown RBP6.17□□□□□ -1.42
SCARB2-218ENST00000639715 SAP30BPQ9UHR5 308 aaKnown RBP6.17□□□□□ -1.42
SCARB2-218ENST00000639715 CCNL1Q9UK58 526 aaPredicted RBP6.17□□□□□ -1.42
SCARB2-218ENST00000639715 LEMD3Q9Y2U8 911 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 NEDD4P46934 1319 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 CASZ1Q86V15 1759 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 ZNF804BA4D1E1 1349 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 hCG_1984214I3L0E3 225 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 OPHN1O60890 802 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 SMNDC1O75940 238 aaKnown RBP eCLIP6.17□□□□□ -1.42
SCARB2-218ENST00000639715 SLC7A5Q01650 507 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 MTF1Q14872 753 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 CCDC174Q6PII3 467 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 CCNI2Q6ZMN8 369 aaPredicted RBP6.17□□□□□ -1.42
SCARB2-218ENST00000639715 TMTC3Q6ZXV5 915 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 ZNF713Q8N859 430 aaPredicted RBP6.17□□□□□ -1.42
SCARB2-218ENST00000639715 MRPL44Q9H9J2 332 aaKnown RBP6.17□□□□□ -1.42
SCARB2-218ENST00000639715 CTTNBP2NLQ9P2B4 639 aa6.17□□□□□ -1.42
SCARB2-218ENST00000639715 KIF28PB7ZC32 967 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 IPO5O00410 1097 aaKnown RBP6.16□□□□□ -1.42
SCARB2-218ENST00000639715 CTNND1O60716 968 aaKnown RBP6.16□□□□□ -1.42
SCARB2-218ENST00000639715 SRGAP2O75044 1071 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 KRT38O76015 456 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 TRIM37O94972 964 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 KRT13P13646 458 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 TCP1P17987 556 aaKnown RBP6.16□□□□□ -1.42
SCARB2-218ENST00000639715 ELF3P78545 371 aaPredicted RBP6.16□□□□□ -1.42
SCARB2-218ENST00000639715 ZBED6P86452 979 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 CCDC15Q0P6D6 951 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 KIAA0753Q2KHM9 967 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 KRT71Q3SY84 523 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 WDR93Q6P2C0 686 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 USP37Q86T82 979 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 CEP70Q8NHQ1 597 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 IGDCC4Q8TDY8 1250 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 TGFBRAP1Q8WUH2 860 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 USP6NLQ92738 828 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 SPATA17Q96L03 361 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 RAB3IPQ96QF0 476 aaPredicted RBP6.16□□□□□ -1.42
SCARB2-218ENST00000639715 IWS1Q96ST2 819 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 IFIH1Q9BYX4 1025 aaKnown RBP6.16□□□□□ -1.42
SCARB2-218ENST00000639715 JAG2Q9Y219 1238 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 DAAM1Q9Y4D1 1078 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 QSER1Q2KHR3 1735 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 SOS2Q07890 1332 aaPredicted RBP6.16□□□□□ -1.42
SCARB2-218ENST00000639715 KDM3AQ9Y4C1 1321 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 HMGB1P1B2RPK0 211 aaPredicted RBP6.16□□□□□ -1.42
SCARB2-218ENST00000639715 KRT14P02533 472 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 VPS41P49754 854 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 C2orf54Q08AI8 447 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 CBX3Q13185 183 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 BLMHQ13867 455 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 ANKRD20A8PQ5CZ79 823 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms