RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 TSGA10IPQ3SY00 556 aa14.86□□□□□ -0.03
SCARB2-215ENST00000639145 SLC17A8Q8NDX2 589 aa14.86□□□□□ -0.03
SCARB2-215ENST00000639145 RBM46Q8TBY0 533 aaKnown RBP14.86□□□□□ -0.03
SCARB2-215ENST00000639145 EEF1GP26641 437 aaKnown RBP14.86□□□□□ -0.03
SCARB2-215ENST00000639145 KRT76Q01546 638 aa14.86□□□□□ -0.03
SCARB2-215ENST00000639145 NEDD9Q14511 834 aa14.86□□□□□ -0.03
SCARB2-215ENST00000639145 MAN2A1Q16706 1144 aa14.86□□□□□ -0.03
SCARB2-215ENST00000639145 RSRC2Q7L4I2 434 aaKnown RBP14.86□□□□□ -0.03
SCARB2-215ENST00000639145 IQCDQ96DY2 449 aa14.86□□□□□ -0.03
SCARB2-215ENST00000639145 VCPKMTQ9H867 229 aa14.86□□□□□ -0.03
SCARB2-215ENST00000639145 KCNK9Q9NPC2 374 aa14.86□□□□□ -0.03
SCARB2-215ENST00000639145 EPN1Q9Y6I3 576 aaPredicted RBP14.86□□□□□ -0.03
SCARB2-215ENST00000639145 ACTN4O43707 911 aaKnown RBP14.86□□□□□ -0.03
SCARB2-215ENST00000639145 RASSF7Q02833 373 aa14.86□□□□□ -0.03
SCARB2-215ENST00000639145 SYCE1Q8N0S2 351 aa14.86□□□□□ -0.03
SCARB2-215ENST00000639145 MRFAP1L1Q96HT8 127 aa14.86□□□□□ -0.03
SCARB2-215ENST00000639145 PRR12Q9ULL5 1215 aa14.86□□□□□ -0.03
SCARB2-215ENST00000639145 BCL9O00512 1426 aa14.86□□□□□ -0.03
SCARB2-215ENST00000639145 C16orf86Q6ZW13 317 aa14.86□□□□□ -0.03
SCARB2-215ENST00000639145 SFR1Q86XK3 245 aa14.86□□□□□ -0.03
SCARB2-215ENST00000639145 AGBL3Q8NEM8 1001 aa14.86□□□□□ -0.03
SCARB2-215ENST00000639145 ZKSCAN4Q969J2 545 aaPredicted RBP14.86□□□□□ -0.03
SCARB2-215ENST00000639145 GAS8O95995 478 aa14.85□□□□□ -0.03
SCARB2-215ENST00000639145 ATP1A3P13637 1013 aa14.85□□□□□ -0.03
SCARB2-215ENST00000639145 PLCD4Q9BRC7 762 aa14.85□□□□□ -0.03
SCARB2-215ENST00000639145 MSTO1Q9BUK6 570 aa14.85□□□□□ -0.03
SCARB2-215ENST00000639145 FBXO28Q9NVF7 368 aa14.85□□□□□ -0.03
SCARB2-215ENST00000639145 NYAP2Q9P242 653 aa14.85□□□□□ -0.03
SCARB2-215ENST00000639145 ARHGAP23Q9P227 1491 aa14.85□□□□□ -0.03
SCARB2-215ENST00000639145 USP32Q8NFA0 1604 aa14.85□□□□□ -0.03
SCARB2-215ENST00000639145 KCNK3O14649 394 aa14.85□□□□□ -0.03
SCARB2-215ENST00000639145 MYL1P05976 194 aa14.85□□□□□ -0.03
SCARB2-215ENST00000639145 POLR2BP30876 1174 aaKnown RBP14.85□□□□□ -0.03
SCARB2-215ENST00000639145 QARSP47897 775 aaKnown RBP14.85□□□□□ -0.03
SCARB2-215ENST00000639145 CEP55Q53EZ4 464 aa14.85□□□□□ -0.03
SCARB2-215ENST00000639145 CELF2O95319 508 aaKnown RBP14.85□□□□□ -0.03
SCARB2-215ENST00000639145 FDX1P10109 184 aa14.85□□□□□ -0.03
SCARB2-215ENST00000639145 MFAP3P55082 362 aa14.85□□□□□ -0.03
SCARB2-215ENST00000639145 CCDC14Q49A88 953 aa14.85□□□□□ -0.03
SCARB2-215ENST00000639145 CASC4Q6P4E1 433 aa14.85□□□□□ -0.03
SCARB2-215ENST00000639145 SCARA5Q6ZMJ2 495 aa14.85□□□□□ -0.03
SCARB2-215ENST00000639145 SPATA33Q96N06 139 aa14.85□□□□□ -0.03
SCARB2-215ENST00000639145 KIF28PB7ZC32 967 aa14.84□□□□□ -0.03
SCARB2-215ENST00000639145 SMIM22K7EJ46 135 aa14.84□□□□□ -0.03
SCARB2-215ENST00000639145 WDR46O15213 610 aaKnown RBP14.84□□□□□ -0.03
SCARB2-215ENST00000639145 OPA1O60313 960 aa14.84□□□□□ -0.03
SCARB2-215ENST00000639145 ANTXR2P58335 489 aa14.84□□□□□ -0.03
SCARB2-215ENST00000639145 LPAR1Q92633 364 aa14.84□□□□□ -0.03
SCARB2-215ENST00000639145 CCDC94Q9BW85 323 aaPredicted RBP14.84□□□□□ -0.03
SCARB2-215ENST00000639145 INPP5FQ9Y2H2 1132 aa14.84□□□□□ -0.03
SCARB2-215ENST00000639145 CD2APQ9Y5K6 639 aa14.84□□□□□ -0.03
SCARB2-215ENST00000639145 GOLGA8SH3BPF8 625 aa14.84□□□□□ -0.03
SCARB2-215ENST00000639145 SLC16A4O15374 487 aa14.84□□□□□ -0.03
SCARB2-215ENST00000639145 RPS12P25398 132 aaKnown RBP14.84□□□□□ -0.03
SCARB2-215ENST00000639145 GPR161Q8N6U8 529 aaKnown RBP14.84□□□□□ -0.03
SCARB2-215ENST00000639145 MCPH1Q8NEM0 835 aa14.84□□□□□ -0.03
SCARB2-215ENST00000639145 SPZ1Q9BXG8 430 aa14.84□□□□□ -0.03
SCARB2-215ENST00000639145 RRAGDQ9NQL2 400 aaPredicted RBP14.84□□□□□ -0.03
SCARB2-215ENST00000639145 GCNT4Q9P109 453 aa14.84□□□□□ -0.03
SCARB2-215ENST00000639145 RNF8O76064 485 aa14.84□□□□□ -0.03
SCARB2-215ENST00000639145 STK10O94804 968 aaKnown RBP14.84□□□□□ -0.03
SCARB2-215ENST00000639145 PDHBP11177 359 aa14.84□□□□□ -0.03
SCARB2-215ENST00000639145 DDR1Q08345 913 aa14.84□□□□□ -0.03
SCARB2-215ENST00000639145 NBPF9Q3BBW0 867 aa14.84□□□□□ -0.03
SCARB2-215ENST00000639145 CFAP221Q4G0U5 840 aa14.84□□□□□ -0.03
SCARB2-215ENST00000639145 PPP1R18Q6NYC8 613 aa14.84□□□□□ -0.03
SCARB2-215ENST00000639145 TAB3Q8N5C8 712 aaPredicted RBP14.84□□□□□ -0.03
SCARB2-215ENST00000639145 SREK1Q8WXA9 508 aaKnown RBP14.84□□□□□ -0.03
SCARB2-215ENST00000639145 RGL1Q9NZL6 768 aa14.84□□□□□ -0.03
SCARB2-215ENST00000639145 MAPK6Q16659 721 aa14.84□□□□□ -0.03
SCARB2-215ENST00000639145 POLRMTO00411 1230 aaKnown RBP14.83□□□□□ -0.03
SCARB2-215ENST00000639145 NDC80O14777 642 aa14.83□□□□□ -0.03
SCARB2-215ENST00000639145 THAP12O43422 761 aa14.83□□□□□ -0.03
SCARB2-215ENST00000639145 DDNO94850 711 aaPredicted RBP14.83□□□□□ -0.03
SCARB2-215ENST00000639145 TXNP10599 105 aaKnown RBP14.83□□□□□ -0.03
SCARB2-215ENST00000639145 CYP2B6P20813 491 aa14.83□□□□□ -0.03
SCARB2-215ENST00000639145 COL9A3Q14050 684 aaPredicted RBP14.83□□□□□ -0.03
SCARB2-215ENST00000639145 LONRF2Q1L5Z9 754 aa14.83□□□□□ -0.03
SCARB2-215ENST00000639145 RESP18Q5W5W9 173 aa14.83□□□□□ -0.03
SCARB2-215ENST00000639145 TWF2Q6IBS0 349 aaKnown RBP14.83□□□□□ -0.03
SCARB2-215ENST00000639145 ENOX1Q8TC92 643 aaKnown RBP14.83□□□□□ -0.03
SCARB2-215ENST00000639145 NSMCE1Q8WV22 266 aa14.83□□□□□ -0.03
SCARB2-215ENST00000639145 PSPC1Q8WXF1 523 aaKnown RBP14.83□□□□□ -0.03
SCARB2-215ENST00000639145 UBE2TQ9NPD8 197 aaPredicted RBP14.83□□□□□ -0.03
SCARB2-215ENST00000639145 ZNF302Q9NR11 478 aa14.83□□□□□ -0.03
SCARB2-215ENST00000639145 UTP11Q9Y3A2 253 aaKnown RBP14.83□□□□□ -0.03
SCARB2-215ENST00000639145 CCL15-CCL14A0A0B4J2E2 113 aa14.83□□□□□ -0.04
SCARB2-215ENST00000639145 ZNF233A6NK53 670 aa14.83□□□□□ -0.04
SCARB2-215ENST00000639145 STAM2O75886 525 aa14.83□□□□□ -0.04
SCARB2-215ENST00000639145 GFPT2O94808 682 aa14.83□□□□□ -0.04
SCARB2-215ENST00000639145 P4HBP07237 508 aaKnown RBP14.83□□□□□ -0.04
SCARB2-215ENST00000639145 MESDQ14696 234 aa14.83□□□□□ -0.04
SCARB2-215ENST00000639145 CCL15Q16663 113 aa14.83□□□□□ -0.04
SCARB2-215ENST00000639145 NAA35Q5VZE5 725 aa14.83□□□□□ -0.04
SCARB2-215ENST00000639145 ACER1Q8TDN7 264 aa14.83□□□□□ -0.04
SCARB2-215ENST00000639145 CACTINQ8WUQ7 758 aaKnown RBP14.83□□□□□ -0.04
SCARB2-215ENST00000639145 GDAP1L1Q96MZ0 367 aa14.83□□□□□ -0.04
SCARB2-215ENST00000639145 LXNQ9BS40 222 aa14.83□□□□□ -0.04
SCARB2-215ENST00000639145 SNX25Q9H3E2 840 aa14.83□□□□□ -0.04
SCARB2-215ENST00000639145 RPF1Q9H9Y2 349 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms