RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ATP2A2P16615 1042 aaKnown RBP20.26■□□□□ 0.83
PNKP-230ENST00000638016 SREBF1P36956 1147 aa20.26■□□□□ 0.83
PNKP-230ENST00000638016 EVCP57679 992 aa20.26■□□□□ 0.83
PNKP-230ENST00000638016 SLC17A8Q8NDX2 589 aa20.26■□□□□ 0.83
PNKP-230ENST00000638016 EHMT1Q9H9B1 1298 aa20.26■□□□□ 0.83
PNKP-230ENST00000638016 VPS54Q9P1Q0 977 aa20.26■□□□□ 0.83
PNKP-230ENST00000638016 CYP46A1Q9Y6A2 500 aa20.26■□□□□ 0.83
PNKP-230ENST00000638016 UNC80Q8N2C7 3258 aa20.26■□□□□ 0.83
PNKP-230ENST00000638016 EPB41L2O43491 1005 aaKnown RBP20.25■□□□□ 0.83
PNKP-230ENST00000638016 ARHGEF15O94989 841 aa20.25■□□□□ 0.83
PNKP-230ENST00000638016 CTSHP09668 335 aa20.25■□□□□ 0.83
PNKP-230ENST00000638016 FOSL2P15408 326 aa20.25■□□□□ 0.83
PNKP-230ENST00000638016 THPOP40225 353 aa20.25■□□□□ 0.83
PNKP-230ENST00000638016 STK3Q13188 491 aa20.25■□□□□ 0.83
PNKP-230ENST00000638016 ITGB3BPQ13352 177 aaPredicted RBP20.25■□□□□ 0.83
PNKP-230ENST00000638016 AP3B2Q13367 1082 aa20.25■□□□□ 0.83
PNKP-230ENST00000638016 LMBR1Q8WVP7 490 aa20.25■□□□□ 0.83
PNKP-230ENST00000638016 ZBTB10Q96DT7 871 aa20.25■□□□□ 0.83
PNKP-230ENST00000638016 CDHR1Q96JP9 859 aa20.25■□□□□ 0.83
PNKP-230ENST00000638016 PCYT2Q99447 389 aa20.25■□□□□ 0.83
PNKP-230ENST00000638016 PRDM12Q9H4Q4 367 aa20.25■□□□□ 0.83
PNKP-230ENST00000638016 MSRAQ9UJ68 235 aa20.25■□□□□ 0.83
PNKP-230ENST00000638016 FAM86B1E9PN63 330 aa20.24■□□□□ 0.83
PNKP-230ENST00000638016 FOSP01100 380 aaPredicted RBP20.24■□□□□ 0.83
PNKP-230ENST00000638016 FAM86B2P0C5J1 330 aa20.24■□□□□ 0.83
PNKP-230ENST00000638016 ACTN1P12814 892 aa20.24■□□□□ 0.83
PNKP-230ENST00000638016 ARHGAP4P98171 946 aa20.24■□□□□ 0.83
PNKP-230ENST00000638016 RAB30Q15771 203 aa20.24■□□□□ 0.83
PNKP-230ENST00000638016 ERICH6BQ5W0A0 696 aa20.24■□□□□ 0.83
PNKP-230ENST00000638016 GIMAP8Q8ND71 665 aaPredicted RBP20.24■□□□□ 0.83
PNKP-230ENST00000638016 MAFAQ8NHW3 353 aaPredicted RBP20.24■□□□□ 0.83
PNKP-230ENST00000638016 SEPT1Q8WYJ6 367 aa20.24■□□□□ 0.83
PNKP-230ENST00000638016 ZMYND12Q9H0C1 365 aa20.24■□□□□ 0.83
PNKP-230ENST00000638016 AGO4Q9HCK5 861 aaKnown RBP20.24■□□□□ 0.83
PNKP-230ENST00000638016 JPH1Q9HDC5 661 aaPredicted RBP20.24■□□□□ 0.83
PNKP-230ENST00000638016 ZNF215Q9UL58 517 aaPredicted RBP20.24■□□□□ 0.83
PNKP-230ENST00000638016 SIP14410 1827 aa20.23■□□□□ 0.83
PNKP-230ENST00000638016 ESYT2A0FGR8 921 aa20.23■□□□□ 0.83
PNKP-230ENST00000638016 DDX39AO00148 427 aaKnown RBP20.23■□□□□ 0.83
PNKP-230ENST00000638016 CXCL10P02778 98 aa20.23■□□□□ 0.83
PNKP-230ENST00000638016 IFNAR1P17181 557 aa20.23■□□□□ 0.83
PNKP-230ENST00000638016 ADAM17P78536 824 aa20.23■□□□□ 0.83
PNKP-230ENST00000638016 DEFB103AP81534 67 aa20.23■□□□□ 0.83
PNKP-230ENST00000638016 CEP55Q53EZ4 464 aa20.23■□□□□ 0.83
PNKP-230ENST00000638016 RUFY4Q6ZNE9 571 aa20.23■□□□□ 0.83
PNKP-230ENST00000638016 SPRED2Q7Z698 418 aa20.23■□□□□ 0.83
PNKP-230ENST00000638016 CRYGNQ8WXF5 182 aa20.23■□□□□ 0.83
PNKP-230ENST00000638016 AIFM3Q96NN9 605 aa20.23■□□□□ 0.83
PNKP-230ENST00000638016 RNF26Q9BY78 433 aaPredicted RBP20.23■□□□□ 0.83
PNKP-230ENST00000638016 TM6SF1Q9BZW5 370 aa20.23■□□□□ 0.83
PNKP-230ENST00000638016 PDRG1Q9NUG6 133 aa20.23■□□□□ 0.83
PNKP-230ENST00000638016 MEIS1O00470 390 aa20.22■□□□□ 0.83
PNKP-230ENST00000638016 CENPBP07199 599 aaPredicted RBP20.22■□□□□ 0.83
PNKP-230ENST00000638016 WDR5P61964 334 aaKnown RBP20.22■□□□□ 0.83
PNKP-230ENST00000638016 AKAP17AQ02040 695 aaKnown RBP20.22■□□□□ 0.83
PNKP-230ENST00000638016 USP38Q8NB14 1042 aa20.22■□□□□ 0.83
PNKP-230ENST00000638016 SLC9A2Q9UBY0 812 aa20.22■□□□□ 0.83
PNKP-230ENST00000638016 MICAL3Q7RTP6 2002 aa20.22■□□□□ 0.83
PNKP-230ENST00000638016 IGLV3-22A0A075B6J6 115 aa20.21■□□□□ 0.83
PNKP-230ENST00000638016 CA3P07451 260 aa20.21■□□□□ 0.83
PNKP-230ENST00000638016 ZNF76P36508 570 aa20.21■□□□□ 0.83
PNKP-230ENST00000638016 ACTR2P61160 394 aa20.21■□□□□ 0.83
PNKP-230ENST00000638016 ADGRE1Q14246 886 aa20.21■□□□□ 0.83
PNKP-230ENST00000638016 CNKSR3Q6P9H4 555 aa20.21■□□□□ 0.83
PNKP-230ENST00000638016 REXO1Q8N1G1 1221 aaKnown RBP20.21■□□□□ 0.83
PNKP-230ENST00000638016 GLG1Q92896 1179 aa20.21■□□□□ 0.83
PNKP-230ENST00000638016 SLC28A3Q9HAS3 691 aa20.21■□□□□ 0.83
PNKP-230ENST00000638016 C6orf50Q9HD87 102 aa20.21■□□□□ 0.83
PNKP-230ENST00000638016 PCDHA11Q9Y5I1 949 aa20.21■□□□□ 0.83
PNKP-230ENST00000638016 A0A0C4DFX4 3053 aa20.2■□□□□ 0.82
PNKP-230ENST00000638016 RSPH10B2B2RC85 870 aa20.2■□□□□ 0.82
PNKP-230ENST00000638016 MAFGO15525 162 aa20.2■□□□□ 0.82
PNKP-230ENST00000638016 EDIL3O43854 480 aa20.2■□□□□ 0.82
PNKP-230ENST00000638016 CCNE2O96020 404 aa20.2■□□□□ 0.82
PNKP-230ENST00000638016 RSPH10BP0C881 870 aa20.2■□□□□ 0.82
PNKP-230ENST00000638016 IGBP1P78318 339 aa20.2■□□□□ 0.82
PNKP-230ENST00000638016 PPFIA1Q13136 1202 aa20.2■□□□□ 0.82
PNKP-230ENST00000638016 PPP2R2DQ66LE6 453 aa20.2■□□□□ 0.82
PNKP-230ENST00000638016 PLA2G4DQ86XP0 818 aa20.2■□□□□ 0.82
PNKP-230ENST00000638016 HERC6Q8IVU3 1022 aa20.2■□□□□ 0.82
PNKP-230ENST00000638016 SLC9A7Q96T83 725 aa20.2■□□□□ 0.82
PNKP-230ENST00000638016 SDF4Q9BRK5 362 aa20.2■□□□□ 0.82
PNKP-230ENST00000638016 GLT8D2Q9H1C3 349 aa20.2■□□□□ 0.82
PNKP-230ENST00000638016 CERS4Q9HA82 394 aa20.2■□□□□ 0.82
PNKP-230ENST00000638016 NFASCO94856 1347 aa20.2■□□□□ 0.82
PNKP-230ENST00000638016 EMSYQ7Z589 1322 aa20.2■□□□□ 0.82
PNKP-230ENST00000638016 LCHNA4D1U4 455 aa20.19■□□□□ 0.82
PNKP-230ENST00000638016 LGR5O75473 907 aa20.19■□□□□ 0.82
PNKP-230ENST00000638016 BAIAP3O94812 1187 aa20.19■□□□□ 0.82
PNKP-230ENST00000638016 SEC24BO95487 1268 aa20.19■□□□□ 0.82
PNKP-230ENST00000638016 GRIK4Q16099 956 aa20.19■□□□□ 0.82
PNKP-230ENST00000638016 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.19■□□□□ 0.82
PNKP-230ENST00000638016 DBF4BQ8NFT6 615 aa20.19■□□□□ 0.82
PNKP-230ENST00000638016 TRAPPC12Q8WVT3 735 aa20.19■□□□□ 0.82
PNKP-230ENST00000638016 ZNF274Q96GC6 653 aaPredicted RBP20.19■□□□□ 0.82
PNKP-230ENST00000638016 ERAP1Q9NZ08 941 aa20.19■□□□□ 0.82
PNKP-230ENST00000638016 EPOPA6NHQ4 379 aa20.18■□□□□ 0.82
PNKP-230ENST00000638016 RFXAPO00287 272 aa20.18■□□□□ 0.82
PNKP-230ENST00000638016 DHX15O43143 795 aaKnown RBP20.18■□□□□ 0.82
PNKP-230ENST00000638016 CYP3A4P08684 503 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms