RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 WDR18Q9BV38 432 aa12.76□□□□□ -0.37
CLN6-217ENST00000636964 RPAP3Q9H6T3 665 aaPredicted RBP12.76□□□□□ -0.37
CLN6-217ENST00000636964 POLD4Q9HCU8 107 aa12.76□□□□□ -0.37
CLN6-217ENST00000636964 TBC1D7Q9P0N9 293 aa12.76□□□□□ -0.37
CLN6-217ENST00000636964 KCNJ18B7U540 433 aa12.76□□□□□ -0.37
CLN6-217ENST00000636964 N4BP3O15049 544 aa12.76□□□□□ -0.37
CLN6-217ENST00000636964 WDR46O15213 610 aaKnown RBP12.76□□□□□ -0.37
CLN6-217ENST00000636964 CHMP2AO43633 222 aa12.76□□□□□ -0.37
CLN6-217ENST00000636964 PLA2G6O60733 806 aa12.76□□□□□ -0.37
CLN6-217ENST00000636964 SPIRE1Q08AE8 756 aa12.76□□□□□ -0.37
CLN6-217ENST00000636964 KCNJ12Q14500 433 aa12.76□□□□□ -0.37
CLN6-217ENST00000636964 DCAF15Q66K64 600 aa12.76□□□□□ -0.37
CLN6-217ENST00000636964 CATSPER3Q86XQ3 398 aa12.76□□□□□ -0.37
CLN6-217ENST00000636964 WNK4Q96J92 1243 aa12.76□□□□□ -0.37
CLN6-217ENST00000636964 PES1O00541 588 aaKnown RBP12.75□□□□□ -0.37
CLN6-217ENST00000636964 KIF1CO43896 1103 aaKnown RBP12.75□□□□□ -0.37
CLN6-217ENST00000636964 MTA1Q13330 715 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 ANKRD40Q6AI12 368 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 MCTP2Q6DN12 878 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 MOXD1Q6UVY6 613 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 IRF2BP1Q8IU81 584 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 GPC2Q8N158 579 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 PKD2L1Q9P0L9 805 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 PHLPP2Q6ZVD8 1323 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 IGLV3-22A0A075B6J6 115 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 ICAM1P05362 532 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 CIITAP33076 1130 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 HMGCS2P54868 508 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 TRAF1Q13077 416 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 TCP11X2Q5H9J9 407 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 SCYL3Q8IZE3 742 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 GOLGA5Q8TBA6 731 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 LPAR1Q92633 364 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 PICK1Q9NRD5 415 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 RGL1Q9NZL6 768 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 COL20A1Q9P218 1284 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 EML1O00423 815 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 PLA2G4BP0C869 781 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 PTPRAP18433 802 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 FILIP1LQ4L180 1135 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 UNC13DQ70J99 1090 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 MNS1Q8NEH6 495 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 ZHX3Q9H4I2 956 aa12.75□□□□□ -0.37
CLN6-217ENST00000636964 CYP3A4P08684 503 aa12.74□□□□□ -0.37
CLN6-217ENST00000636964 GUCY2CP25092 1073 aa12.74□□□□□ -0.37
CLN6-217ENST00000636964 PABPC4Q13310 644 aaKnown RBP eCLIP12.74□□□□□ -0.376e-9■■■□□ 15.4
CLN6-217ENST00000636964 TTI2Q6NXR4 508 aa12.74□□□□□ -0.37
CLN6-217ENST00000636964 CNNM4Q6P4Q7 775 aa12.74□□□□□ -0.37
CLN6-217ENST00000636964 APOBEC3FQ8IUX4 373 aaKnown RBP12.74□□□□□ -0.37
CLN6-217ENST00000636964 CSGALNACT2Q8N6G5 542 aa12.74□□□□□ -0.37
CLN6-217ENST00000636964 NT5C3AQ9H0P0 336 aa12.74□□□□□ -0.37
CLN6-217ENST00000636964 RNF181Q9P0P0 153 aa12.74□□□□□ -0.37
CLN6-217ENST00000636964 CTDP1Q9Y5B0 961 aaPredicted RBP12.74□□□□□ -0.37
CLN6-217ENST00000636964 ABCB11O95342 1321 aa12.74□□□□□ -0.37
CLN6-217ENST00000636964 POLR2AP24928 1970 aaKnown RBP12.74□□□□□ -0.37
CLN6-217ENST00000636964 EFCAB8A8MWE9 144 aa12.74□□□□□ -0.37
CLN6-217ENST00000636964 ARP10275 920 aa12.74□□□□□ -0.37
CLN6-217ENST00000636964 ERCC3P19447 782 aa12.74□□□□□ -0.37
CLN6-217ENST00000636964 LMAN1P49257 510 aa12.74□□□□□ -0.37
CLN6-217ENST00000636964 COPB1P53618 953 aaKnown RBP12.74□□□□□ -0.37
CLN6-217ENST00000636964 GPBP1Q86WP2 473 aa12.74□□□□□ -0.37
CLN6-217ENST00000636964 P2RX5Q93086 422 aa12.74□□□□□ -0.37
CLN6-217ENST00000636964 PURBQ96QR8 312 aaKnown RBP12.74□□□□□ -0.37
CLN6-217ENST00000636964 DUSP9Q99956 384 aaKnown RBP12.74□□□□□ -0.37
CLN6-217ENST00000636964 URI1O94763 535 aaPredicted RBP12.73□□□□□ -0.37
CLN6-217ENST00000636964 SPATA31C1P0DKV0 1188 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 KCNJ6P48051 423 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 BACE1P56817 501 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 TBX2Q13207 712 aaPredicted RBP12.73□□□□□ -0.37
CLN6-217ENST00000636964 EXOC8Q8IYI6 725 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 ZNF280CQ8ND82 737 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 DNAJC19Q96DA6 116 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 ATG4CQ96DT6 458 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 FAM20AQ96MK3 541 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 CTAGE1Q96RT6 745 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 KDM3AQ9Y4C1 1321 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 ANKRD65E5RJM6 399 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 TBX3O15119 743 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 NKRFO15226 690 aaKnown RBP eCLIP12.73□□□□□ -0.379e-7■■■■□ 22.5
CLN6-217ENST00000636964 ATP8B1O43520 1251 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 CCNE1P24864 410 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 RBL2Q08999 1139 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 RSRC2Q7L4I2 434 aaKnown RBP12.73□□□□□ -0.37
CLN6-217ENST00000636964 CLEC4DQ8WXI8 215 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 DHTKD1Q96HY7 919 aaPredicted RBP12.73□□□□□ -0.37
CLN6-217ENST00000636964 FGFBP2Q9BYJ0 223 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 SEMA6BQ9H3T3 888 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 SLC38A10Q9HBR0 1119 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 LIMA1Q9UHB6 759 aaKnown RBP12.73□□□□□ -0.37
CLN6-217ENST00000636964 VAV3Q9UKW4 847 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 PVALEFA0A1B0GWK0 134 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 DDX39AO00148 427 aaKnown RBP12.73□□□□□ -0.37
CLN6-217ENST00000636964 KRT18P05783 430 aaKnown RBP12.73□□□□□ -0.37
CLN6-217ENST00000636964 CTTNQ14247 550 aaKnown RBP12.73□□□□□ -0.37
CLN6-217ENST00000636964 HYIQ5T013 277 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 TC2NQ8N9U0 490 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 IL31RAQ8NI17 732 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 KLRG1Q96E93 195 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 WDR24Q96S15 920 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 PARD6BQ9BYG5 372 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms