RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 GIT2Q14161 759 aa17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 ARHGEF16Q5VV41 709 aa17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 CENPPQ6IPU0 288 aa17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 GADL1Q6ZQY3 521 aa17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 SAMD3Q8N6K7 520 aa17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 ZC3H15Q8WU90 426 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 ZHX3Q9H4I2 956 aa17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 TAF1DQ9H5J8 278 aaPredicted RBP17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 PCDHA2Q9Y5H9 948 aa17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 STK24Q9Y6E0 443 aa17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 ATP2A1O14983 1001 aa17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 N4BP3O15049 544 aa17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 KRT18P05783 430 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 FAM26FQ5R3K3 315 aa17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 CCDC65Q8IXS2 484 aa17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 GUF1Q8N442 669 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 RIT2Q99578 217 aa17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 RUSC1Q9BVN2 902 aa17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 TEX13BQ9BXU2 312 aa17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 GTPBP4Q9BZE4 634 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 THAP9Q9H5L6 903 aa17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 TUFT1Q9NNX1 390 aa17.66■□□□□ 0.42
CACNA1A-231ENST00000636816 BICDL2A1A5D9 508 aa17.65■□□□□ 0.42
CACNA1A-231ENST00000636816 ATP9AO75110 1047 aa17.65■□□□□ 0.42
CACNA1A-231ENST00000636816 EYA4O95677 639 aa17.65■□□□□ 0.42
CACNA1A-231ENST00000636816 POTEJP0CG39 1038 aa17.65■□□□□ 0.42
CACNA1A-231ENST00000636816 ADKP55263 362 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-231ENST00000636816 SPAG1Q07617 926 aa17.65■□□□□ 0.42
CACNA1A-231ENST00000636816 MTMR1Q13613 665 aa17.65■□□□□ 0.42
CACNA1A-231ENST00000636816 FILIP1LQ4L180 1135 aa17.65■□□□□ 0.42
CACNA1A-231ENST00000636816 HERC4Q5GLZ8 1057 aaPredicted RBP17.65■□□□□ 0.42
CACNA1A-231ENST00000636816 CEP135Q66GS9 1140 aa17.65■□□□□ 0.42
CACNA1A-231ENST00000636816 NIPA1Q7RTP0 329 aa17.65■□□□□ 0.42
CACNA1A-231ENST00000636816 ANKRD13AQ8IZ07 590 aa17.65■□□□□ 0.42
CACNA1A-231ENST00000636816 BANK1Q8NDB2 785 aa17.65■□□□□ 0.42
CACNA1A-231ENST00000636816 REEP2Q9BRK0 252 aa17.65■□□□□ 0.42
CACNA1A-231ENST00000636816 USP27XA6NNY8 438 aa17.64■□□□□ 0.41
CACNA1A-231ENST00000636816 RSPH10B2B2RC85 870 aa17.64■□□□□ 0.41
CACNA1A-231ENST00000636816 RSPH10BP0C881 870 aa17.64■□□□□ 0.41
CACNA1A-231ENST00000636816 PPP1R2P41236 205 aa17.64■□□□□ 0.41
CACNA1A-231ENST00000636816 EPHA7Q15375 998 aa17.64■□□□□ 0.41
CACNA1A-231ENST00000636816 A1CFQ9NQ94 594 aaKnown RBP17.64■□□□□ 0.41
CACNA1A-231ENST00000636816 BTBD7Q9P203 1132 aa17.64■□□□□ 0.41
CACNA1A-231ENST00000636816 FRMD3A2A2Y4 597 aa17.64■□□□□ 0.41
CACNA1A-231ENST00000636816 NF2P35240 595 aa17.64■□□□□ 0.41
CACNA1A-231ENST00000636816 PPATQ06203 517 aa17.64■□□□□ 0.41
CACNA1A-231ENST00000636816 ERO1BQ86YB8 467 aa17.64■□□□□ 0.41
CACNA1A-231ENST00000636816 CYP39A1Q9NYL5 469 aa17.64■□□□□ 0.41
CACNA1A-231ENST00000636816 A0A0G2JLL6 359 aaPredicted RBP17.63■□□□□ 0.41
CACNA1A-231ENST00000636816 TESPA1A2RU30 521 aaPredicted RBP17.63■□□□□ 0.41
CACNA1A-231ENST00000636816 NR3C2P08235 984 aa17.63■□□□□ 0.41
CACNA1A-231ENST00000636816 RINT1Q6NUQ1 792 aa17.63■□□□□ 0.41
CACNA1A-231ENST00000636816 PRRT2Q7Z6L0 340 aaPredicted RBP17.63■□□□□ 0.41
CACNA1A-231ENST00000636816 VSIG10LQ86VR7 867 aa17.63■□□□□ 0.41
CACNA1A-231ENST00000636816 MYOCDQ8IZQ8 938 aa17.63■□□□□ 0.41
CACNA1A-231ENST00000636816 TC2NQ8N9U0 490 aa17.63■□□□□ 0.41
CACNA1A-231ENST00000636816 CPLX3Q8WVH0 158 aa17.63■□□□□ 0.41
CACNA1A-231ENST00000636816 ACAD9Q9H845 621 aa17.63■□□□□ 0.41
CACNA1A-231ENST00000636816 MYPNQ86TC9 1320 aa17.63■□□□□ 0.41
CACNA1A-231ENST00000636816 KIAA1217Q5T5P2 1943 aa17.63■□□□□ 0.41
CACNA1A-231ENST00000636816 LCTP09848 1927 aa17.63■□□□□ 0.41
CACNA1A-231ENST00000636816 SFI1A8K8P3 1242 aa17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 PRKCSHP14314 528 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 EEF1GP26641 437 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 RBL2Q08999 1139 aa17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 LBX2Q6XYB7 198 aa17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 MIER3Q7Z3K6 550 aa17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 NELFCDQ8IXH7 590 aa17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 ANKRD20A12PQ8NF67 263 aa17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 NOC3LQ8WTT2 800 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 TMX1Q9H3N1 280 aa17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 LOC285556D6RIA3 1793 aa17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 SCN4AP35499 1836 aa17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 SPDYE5A6NIY4 337 aa17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 CASP5P51878 434 aa17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 SFR1Q86XK3 245 aa17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 TMEM139Q8IV31 216 aa17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 SCFD1Q8WVM8 642 aa17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 CNOT6LQ96LI5 555 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 LXNQ9BS40 222 aa17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 R3HDMLQ9H3Y0 253 aa17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 TRMT1Q9NXH9 659 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 MAGEC2Q9UBF1 373 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-231ENST00000636816 TRAF5O00463 557 aa17.61■□□□□ 0.41
CACNA1A-231ENST00000636816 HOXA7P31268 230 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-231ENST00000636816 UBXN1Q04323 297 aa17.61■□□□□ 0.41
CACNA1A-231ENST00000636816 OPTNQ96CV9 577 aa17.61■□□□□ 0.41
CACNA1A-231ENST00000636816 TUBGCP2Q9BSJ2 902 aa17.61■□□□□ 0.41
CACNA1A-231ENST00000636816 CLEC11AQ9Y240 323 aa17.61■□□□□ 0.41
CACNA1A-231ENST00000636816 DOCK5Q9H7D0 1870 aa17.61■□□□□ 0.41
CACNA1A-231ENST00000636816 RNF225M0QZC1 329 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-231ENST00000636816 RGS20O76081 388 aa17.6■□□□□ 0.41
CACNA1A-231ENST00000636816 CCND2P30279 289 aa17.6■□□□□ 0.41
CACNA1A-231ENST00000636816 FSTL1Q12841 308 aa17.6■□□□□ 0.41
CACNA1A-231ENST00000636816 MOGSQ13724 837 aa17.6■□□□□ 0.41
CACNA1A-231ENST00000636816 DNTTIP2Q5QJE6 756 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-231ENST00000636816 C1orf186Q6ZWK4 172 aa17.6■□□□□ 0.41
CACNA1A-231ENST00000636816 ZNF507Q8TCN5 953 aa17.6■□□□□ 0.41
CACNA1A-231ENST00000636816 NSUN6Q8TEA1 469 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-231ENST00000636816 NACC1Q96RE7 527 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms