RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 CTSHP09668 335 aa17.14■□□□□ 0.33
CACNA1A-230ENST00000636768 IKBKEQ14164 716 aa17.14■□□□□ 0.33
CACNA1A-230ENST00000636768 MBTPS1Q14703 1052 aa17.14■□□□□ 0.33
CACNA1A-230ENST00000636768 FBXL16Q8N461 479 aa17.14■□□□□ 0.33
CACNA1A-230ENST00000636768 CCDC12Q8WUD4 166 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-230ENST00000636768 LMBR1Q8WVP7 490 aa17.14■□□□□ 0.33
CACNA1A-230ENST00000636768 PPM1EQ8WY54 764 aa17.14■□□□□ 0.33
CACNA1A-230ENST00000636768 SDF4Q9BRK5 362 aa17.14■□□□□ 0.33
CACNA1A-230ENST00000636768 ZBED2Q9BTP6 218 aa17.14■□□□□ 0.33
CACNA1A-230ENST00000636768 KCNH7Q9NS40 1196 aa17.14■□□□□ 0.33
CACNA1A-230ENST00000636768 SCN5AQ14524 2016 aa17.14■□□□□ 0.33
CACNA1A-230ENST00000636768 NRCAMQ92823 1304 aa17.14■□□□□ 0.33
CACNA1A-230ENST00000636768 NID2Q14112 1375 aa17.14■□□□□ 0.33
CACNA1A-230ENST00000636768 GSTTP1A0A1W2PQM5 241 aa17.13■□□□□ 0.33
CACNA1A-230ENST00000636768 EPB41L2O43491 1005 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-230ENST00000636768 TLL1O43897 1013 aa17.13■□□□□ 0.33
CACNA1A-230ENST00000636768 CAND2O75155 1236 aa17.13■□□□□ 0.33
CACNA1A-230ENST00000636768 LGR5O75473 907 aa17.13■□□□□ 0.33
CACNA1A-230ENST00000636768 MARK3P27448 753 aa17.13■□□□□ 0.33
CACNA1A-230ENST00000636768 ZNF76P36508 570 aa17.13■□□□□ 0.33
CACNA1A-230ENST00000636768 SREBF1P36956 1147 aa17.13■□□□□ 0.33
CACNA1A-230ENST00000636768 DEFB103AP81534 67 aa17.13■□□□□ 0.33
CACNA1A-230ENST00000636768 PPFIA1Q13136 1202 aa17.13■□□□□ 0.33
CACNA1A-230ENST00000636768 ADGRE1Q14246 886 aa17.13■□□□□ 0.33
CACNA1A-230ENST00000636768 CEP55Q53EZ4 464 aa17.13■□□□□ 0.33
CACNA1A-230ENST00000636768 JAKMIP3Q5VZ66 844 aa17.13■□□□□ 0.33
CACNA1A-230ENST00000636768 CYP2W1Q8TAV3 490 aa17.13■□□□□ 0.33
CACNA1A-230ENST00000636768 PHKBQ93100 1093 aa17.13■□□□□ 0.33
CACNA1A-230ENST00000636768 AGXT2Q9BYV1 514 aa17.13■□□□□ 0.33
CACNA1A-230ENST00000636768 SMARCAD1Q9H4L7 1026 aa17.13■□□□□ 0.33
CACNA1A-230ENST00000636768 C6orf50Q9HD87 102 aa17.13■□□□□ 0.33
CACNA1A-230ENST00000636768 ERAP1Q9NZ08 941 aa17.13■□□□□ 0.33
CACNA1A-230ENST00000636768 SLC9A2Q9UBY0 812 aa17.13■□□□□ 0.33
CACNA1A-230ENST00000636768 MYH7BA7E2Y1 1941 aa17.12■□□□□ 0.33
CACNA1A-230ENST00000636768 PRPF3O43395 683 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-230ENST00000636768 CLK2P49760 499 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-230ENST00000636768 TCTN1Q2MV58 587 aa17.12■□□□□ 0.33
CACNA1A-230ENST00000636768 RUFY3Q7L099 469 aa17.12■□□□□ 0.33
CACNA1A-230ENST00000636768 TMCO2Q7Z6W1 182 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-230ENST00000636768 USP38Q8NB14 1042 aa17.12■□□□□ 0.33
CACNA1A-230ENST00000636768 AZI2Q9H6S1 392 aa17.12■□□□□ 0.33
CACNA1A-230ENST00000636768 CERS4Q9HA82 394 aa17.12■□□□□ 0.33
CACNA1A-230ENST00000636768 PPP4R2Q9NY27 417 aa17.12■□□□□ 0.33
CACNA1A-230ENST00000636768 ESYT2A0FGR8 921 aa17.11■□□□□ 0.33
CACNA1A-230ENST00000636768 PPFIA3O75145 1194 aa17.11■□□□□ 0.33
CACNA1A-230ENST00000636768 ARP10275 920 aa17.11■□□□□ 0.33
CACNA1A-230ENST00000636768 CCT2P78371 535 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-230ENST00000636768 GRIK4Q16099 956 aa17.11■□□□□ 0.33
CACNA1A-230ENST00000636768 MCTP2Q6DN12 878 aa17.11■□□□□ 0.33
CACNA1A-230ENST00000636768 REXO1Q8N1G1 1221 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-230ENST00000636768 DBF4BQ8NFT6 615 aa17.11■□□□□ 0.33
CACNA1A-230ENST00000636768 SLC26A6Q9BXS9 759 aa17.11■□□□□ 0.33
CACNA1A-230ENST00000636768 ZMYND12Q9H0C1 365 aa17.11■□□□□ 0.33
CACNA1A-230ENST00000636768 ZSWIM6Q9HCJ5 1215 aa17.11■□□□□ 0.33
CACNA1A-230ENST00000636768 AGO4Q9HCK5 861 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-230ENST00000636768 CYP46A1Q9Y6A2 500 aa17.11■□□□□ 0.33
CACNA1A-230ENST00000636768 NFASCO94856 1347 aa17.11■□□□□ 0.33
CACNA1A-230ENST00000636768 MEIS1O00470 390 aa17.1■□□□□ 0.33
CACNA1A-230ENST00000636768 GNA11P29992 359 aa17.1■□□□□ 0.33
CACNA1A-230ENST00000636768 PDIA3P30101 505 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-230ENST00000636768 ACTR2P61160 394 aa17.1■□□□□ 0.33
CACNA1A-230ENST00000636768 ADAM17P78536 824 aa17.1■□□□□ 0.33
CACNA1A-230ENST00000636768 TAP1Q03518 808 aa17.1■□□□□ 0.33
CACNA1A-230ENST00000636768 CCDC85BQ15834 202 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-230ENST00000636768 PKN1Q16512 942 aa17.1■□□□□ 0.33
CACNA1A-230ENST00000636768 FAM117BQ6P1L5 589 aa17.1■□□□□ 0.33
CACNA1A-230ENST00000636768 TAF2Q6P1X5 1199 aa17.1■□□□□ 0.33
CACNA1A-230ENST00000636768 MICALL1Q8N3F8 863 aa17.1■□□□□ 0.33
CACNA1A-230ENST00000636768 CCDC148Q8NFR7 591 aa17.1■□□□□ 0.33
CACNA1A-230ENST00000636768 ARNTL2Q8WYA1 636 aa17.1■□□□□ 0.33
CACNA1A-230ENST00000636768 SEPT8Q92599 483 aa17.1■□□□□ 0.33
CACNA1A-230ENST00000636768 RNF26Q9BY78 433 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-230ENST00000636768 NCOA5Q9HCD5 579 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-230ENST00000636768 TUBE1Q9UJT0 475 aa17.1■□□□□ 0.33
CACNA1A-230ENST00000636768 TRPC6Q9Y210 931 aa17.1■□□□□ 0.33
CACNA1A-230ENST00000636768 A0A0C4DFX4 3053 aa17.1■□□□□ 0.33
CACNA1A-230ENST00000636768 EYSQ5T1H1 3165 aa17.1■□□□□ 0.33
CACNA1A-230ENST00000636768 CHD9Q3L8U1 2897 aa17.09■□□□□ 0.33
CACNA1A-230ENST00000636768 RBAK-RBAKDNI3L0D1 243 aa17.09■□□□□ 0.33
CACNA1A-230ENST00000636768 DDX39AO00148 427 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-230ENST00000636768 ARHGEF15O94989 841 aa17.09■□□□□ 0.33
CACNA1A-230ENST00000636768 GJB5O95377 273 aa17.09■□□□□ 0.33
CACNA1A-230ENST00000636768 AMHP03971 560 aa17.09■□□□□ 0.33
CACNA1A-230ENST00000636768 IFNAR1P17181 557 aa17.09■□□□□ 0.33
CACNA1A-230ENST00000636768 IGBP1P78318 339 aa17.09■□□□□ 0.33
CACNA1A-230ENST00000636768 ITGB3BPQ13352 177 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-230ENST00000636768 TOB2Q14106 344 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-230ENST00000636768 PLEKHG4Q58EX7 1191 aa17.09■□□□□ 0.33
CACNA1A-230ENST00000636768 RUFY4Q6ZNE9 571 aa17.09■□□□□ 0.33
CACNA1A-230ENST00000636768 NIPA1Q7RTP0 329 aa17.09■□□□□ 0.33
CACNA1A-230ENST00000636768 RSPH3Q86UC2 560 aa17.09■□□□□ 0.33
CACNA1A-230ENST00000636768 PLA2G4DQ86XP0 818 aa17.09■□□□□ 0.33
CACNA1A-230ENST00000636768 BICD2Q8TD16 824 aa17.09■□□□□ 0.33
CACNA1A-230ENST00000636768 TNPO1Q92973 898 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-230ENST00000636768 RAD9AQ99638 391 aa17.09■□□□□ 0.33
CACNA1A-230ENST00000636768 UPF3BQ9BZI7 483 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-230ENST00000636768 LCHNA4D1U4 455 aa17.08■□□□□ 0.32
CACNA1A-230ENST00000636768 RFXAPO00287 272 aa17.08■□□□□ 0.32
CACNA1A-230ENST00000636768 CPLX1O14810 134 aa17.08■□□□□ 0.32
CACNA1A-230ENST00000636768 GTPBP6O43824 516 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms