RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 CYP4F3Q08477 520 aa5.92□□□□□ -1.46
CLN5-212ENST00000636602 PCBP1Q15365 356 aaKnown RBP eCLIP5.92□□□□□ -1.46
CLN5-212ENST00000636602 CFAP100Q494V2 611 aa5.92□□□□□ -1.46
CLN5-212ENST00000636602 DENND5AQ6IQ26 1287 aa5.92□□□□□ -1.46
CLN5-212ENST00000636602 STYK1Q6J9G0 422 aa5.92□□□□□ -1.46
CLN5-212ENST00000636602 KCNT2Q6UVM3 1135 aa5.92□□□□□ -1.46
CLN5-212ENST00000636602 UBE2R2Q712K3 238 aaPredicted RBP5.92□□□□□ -1.46
CLN5-212ENST00000636602 JMJD8Q96S16 334 aa5.92□□□□□ -1.46
CLN5-212ENST00000636602 MCMBPQ9BTE3 642 aa5.92□□□□□ -1.46
CLN5-212ENST00000636602 GPRC5CQ9NQ84 441 aa5.92□□□□□ -1.46
CLN5-212ENST00000636602 CHPF2Q9P2E5 772 aa5.92□□□□□ -1.46
CLN5-212ENST00000636602 PCDHA9Q9Y5H5 950 aa5.92□□□□□ -1.46
CLN5-212ENST00000636602 BACE2Q9Y5Z0 518 aa5.92□□□□□ -1.46
CLN5-212ENST00000636602 C2orf71A6NGG8 1288 aa5.91□□□□□ -1.46
CLN5-212ENST00000636602 B4E1Z4 1266 aa5.91□□□□□ -1.46
CLN5-212ENST00000636602 AURKAO14965 403 aa5.91□□□□□ -1.46
CLN5-212ENST00000636602 IFNGR1P15260 489 aa5.91□□□□□ -1.46
CLN5-212ENST00000636602 POU3F2P20265 443 aaPredicted RBP5.91□□□□□ -1.46
CLN5-212ENST00000636602 NOP2P46087 812 aaKnown RBP5.91□□□□□ -1.46
CLN5-212ENST00000636602 SEPHS1P49903 392 aa5.91□□□□□ -1.46
CLN5-212ENST00000636602 GUCY2FP51841 1108 aa5.91□□□□□ -1.46
CLN5-212ENST00000636602 MVKQ03426 396 aa5.91□□□□□ -1.46
CLN5-212ENST00000636602 PAQR3Q6TCH7 311 aa5.91□□□□□ -1.46
CLN5-212ENST00000636602 MTDHQ86UE4 582 aaKnown RBP5.91□□□□□ -1.46
CLN5-212ENST00000636602 ZNF761Q86XN6 746 aaPredicted RBP5.91□□□□□ -1.46
CLN5-212ENST00000636602 KREMEN2Q8NCW0 462 aa5.91□□□□□ -1.46
CLN5-212ENST00000636602 FRS2Q8WU20 508 aa5.91□□□□□ -1.46
CLN5-212ENST00000636602 PHF20Q9BVI0 1012 aa5.91□□□□□ -1.46
CLN5-212ENST00000636602 ST6GALNAC2Q9UJ37 374 aa5.91□□□□□ -1.46
CLN5-212ENST00000636602 MEFVO15553 781 aaPredicted RBP5.9□□□□□ -1.46
CLN5-212ENST00000636602 SRGAP3O43295 1099 aa5.9□□□□□ -1.46
CLN5-212ENST00000636602 NPTXRO95502 500 aa5.9□□□□□ -1.46
CLN5-212ENST00000636602 CYBBP04839 570 aa5.9□□□□□ -1.46
CLN5-212ENST00000636602 DBHP09172 617 aa5.9□□□□□ -1.46
CLN5-212ENST00000636602 NCAM1P13591 858 aa5.9□□□□□ -1.46
CLN5-212ENST00000636602 NAT1P18440 290 aa5.9□□□□□ -1.46
CLN5-212ENST00000636602 MC3RP41968 323 aa5.9□□□□□ -1.46
CLN5-212ENST00000636602 SARSP49591 514 aaKnown RBP5.9□□□□□ -1.46
CLN5-212ENST00000636602 DHCR24Q15392 516 aa5.9□□□□□ -1.46
CLN5-212ENST00000636602 SEPT7Q16181 437 aaKnown RBP5.9□□□□□ -1.46
CLN5-212ENST00000636602 TMEM52Q8NDY8 209 aa5.9□□□□□ -1.46
CLN5-212ENST00000636602 COPS5Q92905 334 aa5.9□□□□□ -1.46
CLN5-212ENST00000636602 FCRL3Q96P31 734 aaPredicted RBP5.9□□□□□ -1.46
CLN5-212ENST00000636602 ZNF747Q9BV97 191 aa5.9□□□□□ -1.46
CLN5-212ENST00000636602 CDADC1Q9BWV3 514 aa5.9□□□□□ -1.46
CLN5-212ENST00000636602 SSBP3Q9BWW4 388 aaPredicted RBP5.9□□□□□ -1.46
CLN5-212ENST00000636602 MTFR1LQ9H019 292 aa5.9□□□□□ -1.46
CLN5-212ENST00000636602 TSC22D4Q9Y3Q8 395 aa5.9□□□□□ -1.46
CLN5-212ENST00000636602 PCDHA8Q9Y5H6 950 aa5.9□□□□□ -1.46
CLN5-212ENST00000636602 EYA4O95677 639 aa5.89□□□□□ -1.47
CLN5-212ENST00000636602 PLS3P13797 630 aa5.89□□□□□ -1.47
CLN5-212ENST00000636602 VAV1P15498 845 aa5.89□□□□□ -1.47
CLN5-212ENST00000636602 BMP8BP34820 402 aa5.89□□□□□ -1.47
CLN5-212ENST00000636602 CDSNQ15517 529 aa5.89□□□□□ -1.47
CLN5-212ENST00000636602 HSP90AB2PQ58FF8 381 aa5.89□□□□□ -1.47
CLN5-212ENST00000636602 ACBD5Q5T8D3 534 aaPredicted RBP5.89□□□□□ -1.47
CLN5-212ENST00000636602 CCDC181Q5TID7 509 aa5.89□□□□□ -1.47
CLN5-212ENST00000636602 PIK3R6Q5UE93 754 aa5.89□□□□□ -1.47
CLN5-212ENST00000636602 CDCA2Q69YH5 1023 aaPredicted RBP5.89□□□□□ -1.47
CLN5-212ENST00000636602 ZCCHC8Q6NZY4 707 aaKnown RBP5.89□□□□□ -1.47
CLN5-212ENST00000636602 DDX53Q86TM3 631 aaKnown RBP5.89□□□□□ -1.47
CLN5-212ENST00000636602 FMNL3Q8IVF7 1028 aa5.89□□□□□ -1.47
CLN5-212ENST00000636602 IFNL3Q8IZI9 196 aa5.89□□□□□ -1.47
CLN5-212ENST00000636602 NPLOC4Q8TAT6 608 aa5.89□□□□□ -1.47
CLN5-212ENST00000636602 WDR66Q8TBY9 1149 aa5.89□□□□□ -1.47
CLN5-212ENST00000636602 USP7Q93009 1102 aa5.89□□□□□ -1.47
CLN5-212ENST00000636602 WNK4Q96J92 1243 aa5.89□□□□□ -1.47
CLN5-212ENST00000636602 ZFYVE21Q9BQ24 234 aa5.89□□□□□ -1.47
CLN5-212ENST00000636602 SLC12A9Q9BXP2 914 aa5.89□□□□□ -1.47
CLN5-212ENST00000636602 CLEC1BQ9P126 229 aa5.89□□□□□ -1.47
CLN5-212ENST00000636602 SAMD15Q9P1V8 674 aa5.89□□□□□ -1.47
CLN5-212ENST00000636602 A0A1W2PQ27 194 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 A0A1W2PQ64 194 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 A0A1W2PQC6 194 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 A0A1W2PQD8 194 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 KATNA1O75449 491 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 ZNF205O95201 554 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 GSTM1P09488 218 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 TGM1P22735 817 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 LTBRP36941 435 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 GPR85P60893 370 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 STAT4Q14765 748 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 EEF1DP3Q658K8 133 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 RCSD1Q6JBY9 416 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 RSPO2Q6UXX9 243 aaPredicted RBP5.88□□□□□ -1.47
CLN5-212ENST00000636602 LHFPL2Q6ZUX7 228 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 B3GNT8Q7Z7M8 397 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 ZC3H7AQ8IWR0 971 aaKnown RBP5.88□□□□□ -1.47
CLN5-212ENST00000636602 OR2W6PQ8NHA6 318 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 TTC1Q99614 292 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 VPS11Q9H270 941 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.88□□□□□ -1.47
CLN5-212ENST00000636602 GPR27Q9NS67 375 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 SLC5A4Q9NY91 659 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 NTMQ9P121 344 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 TCEAL9Q9UHQ7 104 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 TMEFF2Q9UIK5 374 aaPredicted RBP5.88□□□□□ -1.47
CLN5-212ENST00000636602 THRAP3Q9Y2W1 955 aaKnown RBP5.88□□□□□ -1.47
CLN5-212ENST00000636602 WASHC2CQ9Y4E1 1318 aa5.88□□□□□ -1.47
CLN5-212ENST00000636602 GPR39O43194 453 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms