RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	RASSF8	Q8NHQ8	419 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	NEK9	Q8TD19	979 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	EIF2AK1	Q9BQI3	630 aa	Known RBP	10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	POLR3C	Q9BUI4	534 aa	Predicted RBP	10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	NT5C3A	Q9H0P0	336 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CUEDC2	Q9H467	287 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	BCAS3	Q9H6U6	928 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	JPH1	Q9HDC5	661 aa	Predicted RBP	10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	FLRT1	Q9NZU1	646 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	DDX41	Q9UJV9	622 aa	Known RBP	10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	POTEB3	A0JP26	581 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	WDR64	B1ANS9	1081 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	FARP2	O94887	1054 aa	Predicted RBP	10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	SLITRK3	O94933	977 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	LETM1	O95202	739 aa	Predicted RBP	10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	MUT	P22033	750 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	MDM2	Q00987	491 aa	Predicted RBP	10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	MAP2K1	Q02750	393 aa	Predicted RBP	10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	NEDD9	Q14511	834 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	TTLL4	Q14679	1199 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	ZRSR1	Q15695	479 aa	Known RBP	10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CCL14	Q16627	93 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	LY6K	Q17RY6	165 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	KANK3	Q6NY19	840 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	POTEB	Q6S5H4	581 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	MIER3	Q7Z3K6	550 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CEP57L1	Q8IYX8	460 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	KCTD17	Q8N5Z5	321 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	SCFD2	Q8WU76	684 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CDK5RAP3	Q96JB5	506 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	PLIN2	Q99541	437 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	GZF1	Q9H116	711 aa	Predicted RBP	10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	ABHD16B	Q9H3Z7	469 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	MAGEF1	Q9HAY2	307 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	TUFT1	Q9NNX1	390 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	PDGFC	Q9NRA1	345 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	BLOC1S4	Q9NUP1	217 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	SLC9A2	Q9UBY0	812 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	STK17A	Q9UEE5	414 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	TCEAL9	Q9UHQ7	104 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	GABRQ	Q9UN88	632 aa		10.75	□□□□□ -0.69
CACNA1A-223	ENST00000636058	SYCE3	A1L190	88 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	POTEF	A5A3E0	1075 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	FOXN1	O15353	648 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	GGPS1	O95749	300 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	TXN	P10599	105 aa	Known RBP	10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	FLT3LG	P49771	235 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	ZNF445	P59923	1031 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	ACTR2	P61160	394 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CYP4A11	Q02928	519 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	PRKCZ	Q05513	592 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	ACVR2B	Q13705	512 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CELF3	Q5SZQ8	465 aa	Known RBP	10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	POTEG	Q6S5H5	508 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	METTL7B	Q6UX53	244 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CYFIP1	Q7L576	1253 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	KCNK18	Q7Z418	384 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CD99L2	Q8TCZ2	262 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	RAD54L	Q92698	747 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	PAGE5	Q96GU1	130 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CCDC34	Q96HJ3	373 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	DYDC2	Q96IM9	177 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	MTR	Q99707	1265 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	KBTBD4	Q9NVX7	518 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	RGL1	Q9NZL6	768 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	HOOK1	Q9UJC3	728 aa	Known RBP	10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	KIAA1024	Q9UPX6	916 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	TELO2	Q9Y4R8	837 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	PCDHA10	Q9Y5I2	948 aa		10.74	□□□□□ -0.69
CACNA1A-223	ENST00000636058	FKTN	O75072	461 aa		10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	ATG7	O95352	703 aa		10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	LYPLA2	O95372	231 aa		10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	GNRH1	P01148	92 aa		10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	P4HB	P07237	508 aa	Known RBP	10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	PRR29	P0C7W0	189 aa		10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	ZNF865	P0CJ78	1059 aa	Predicted RBP	10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CYP2C19	P33261	490 aa		10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	ADCYAP1R1	P41586	468 aa		10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	PNOC	Q13519	176 aa		10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CTTN	Q14247	550 aa	Known RBP	10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	POSTN	Q15063	836 aa		10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	TMEM63B	Q5T3F8	832 aa		10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	ABHD15	Q6UXT9	468 aa		10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CKAP2L	Q8IYA6	745 aa		10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	GRAMD1C	Q8IYS0	662 aa		10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	ZNF296	Q8WUU4	475 aa	Predicted RBP	10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	LARP4B	Q92615	738 aa	Known RBP	10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	ERO1A	Q96HE7	468 aa		10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	LXN	Q9BS40	222 aa		10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	KIAA1468	Q9P260	1216 aa		10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	WRAP73	Q9P2S5	460 aa	Predicted RBP	10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	SRRD	Q9UH36	339 aa		10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	ZHX1	Q9UKY1	873 aa	Predicted RBP	10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	SAMM50	Q9Y512	469 aa		10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	WDR81	Q562E7	1941 aa		10.73	□□□□□ -0.69
CACNA1A-223	ENST00000636058	LOXHD1	Q8IVV2	1947 aa		10.72	□□□□□ -0.69
CACNA1A-223	ENST00000636058	IGKV6D-21	A0A0A0MT36	114 aa		10.72	□□□□□ -0.69
CACNA1A-223	ENST00000636058	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	10.72	□□□□□ -0.69
CACNA1A-223	ENST00000636058	GSTTP1	A0A1W2PQM5	241 aa		10.72	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms