RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 USP17L22D6RA61 530 aa13.71□□□□□ -0.22
PTPN11-205ENST00000635625 USP17L17D6RBQ6 530 aa13.71□□□□□ -0.22
PTPN11-205ENST00000635625 USP17L19D6RCP7 530 aa13.71□□□□□ -0.22
PTPN11-205ENST00000635625 USP17L20D6RJB6 530 aa13.71□□□□□ -0.22
PTPN11-205ENST00000635625 MUTP22033 750 aa13.71□□□□□ -0.22
PTPN11-205ENST00000635625 USP17L24Q0WX57 530 aa13.71□□□□□ -0.22
PTPN11-205ENST00000635625 USP17L6PQ6QN14 398 aa13.71□□□□□ -0.22
PTPN11-205ENST00000635625 GPBP1Q86WP2 473 aa13.71□□□□□ -0.22
PTPN11-205ENST00000635625 SIAH1Q8IUQ4 282 aa13.71□□□□□ -0.22
PTPN11-205ENST00000635625 TRIM58Q8NG06 486 aa13.71□□□□□ -0.22
PTPN11-205ENST00000635625 C7orf43Q8WVR3 580 aa13.71□□□□□ -0.22
PTPN11-205ENST00000635625 CEP72Q9P209 647 aa13.71□□□□□ -0.22
PTPN11-205ENST00000635625 GUCA1BQ9UMX6 200 aa13.71□□□□□ -0.22
PTPN11-205ENST00000635625 KIAA1024Q9UPX6 916 aa13.71□□□□□ -0.22
PTPN11-205ENST00000635625 PLA2G6O60733 806 aa13.7□□□□□ -0.22
PTPN11-205ENST00000635625 CCDC40Q4G0X9 1142 aa13.7□□□□□ -0.22
PTPN11-205ENST00000635625 FKBP1CQ5VVH2 108 aa13.7□□□□□ -0.22
PTPN11-205ENST00000635625 RUBCNQ92622 972 aa13.7□□□□□ -0.22
PTPN11-205ENST00000635625 POLR3CQ9BUI4 534 aaPredicted RBP13.7□□□□□ -0.22
PTPN11-205ENST00000635625 VPS33BQ9H267 617 aa13.7□□□□□ -0.22
PTPN11-205ENST00000635625 SH2D4AQ9H788 454 aa13.7□□□□□ -0.22
PTPN11-205ENST00000635625 GOPCQ9HD26 462 aa13.7□□□□□ -0.22
PTPN11-205ENST00000635625 PPP1R1BQ9UD71 204 aaPredicted RBP13.7□□□□□ -0.22
PTPN11-205ENST00000635625 DNM3Q9UQ16 869 aa13.7□□□□□ -0.22
PTPN11-205ENST00000635625 PCDHA2Q9Y5H9 948 aa13.7□□□□□ -0.22
PTPN11-205ENST00000635625 SAR1BQ9Y6B6 198 aa13.7□□□□□ -0.22
PTPN11-205ENST00000635625 A0A0U1RQJ8 604 aa13.69□□□□□ -0.22
PTPN11-205ENST00000635625 KRT18P05783 430 aaKnown RBP13.69□□□□□ -0.22
PTPN11-205ENST00000635625 CYP11B2P19099 503 aa13.69□□□□□ -0.22
PTPN11-205ENST00000635625 SLC12A3P55017 1021 aa13.69□□□□□ -0.22
PTPN11-205ENST00000635625 SPIRE1Q08AE8 756 aa13.69□□□□□ -0.22
PTPN11-205ENST00000635625 GPS2Q13227 327 aa13.69□□□□□ -0.22
PTPN11-205ENST00000635625 ECM1Q16610 540 aa13.69□□□□□ -0.22
PTPN11-205ENST00000635625 MSL1Q68DK7 614 aa13.69□□□□□ -0.22
PTPN11-205ENST00000635625 CCDC155Q8N6L0 562 aa13.69□□□□□ -0.22
PTPN11-205ENST00000635625 SYT2Q8N9I0 419 aaPredicted RBP13.69□□□□□ -0.22
PTPN11-205ENST00000635625 ATRIPQ8WXE1 791 aa13.69□□□□□ -0.22
PTPN11-205ENST00000635625 SECISBP2LQ93073 1101 aaKnown RBP13.69□□□□□ -0.22
PTPN11-205ENST00000635625 HPS3Q969F9 1004 aa13.69□□□□□ -0.22
PTPN11-205ENST00000635625 HDAC9Q9UKV0 1011 aa13.69□□□□□ -0.22
PTPN11-205ENST00000635625 POTEB3A0JP26 581 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 TARSL2A2RTX5 802 aaKnown RBP13.68□□□□□ -0.22
PTPN11-205ENST00000635625 POTECB2RU33 542 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 TRAF5O00463 557 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 TACC1O75410 805 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 TBC1D8O95759 1140 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 PRLRP16471 622 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 GAP43P17677 238 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 ITIH3Q06033 890 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 IKQ13123 557 aaPredicted RBP13.68□□□□□ -0.22
PTPN11-205ENST00000635625 WDR93Q6P2C0 686 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 PDXDC1Q6P996 788 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 POTEBQ6S5H4 581 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 CACNA2D4Q7Z3S7 1137 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 LENG9Q96B70 501 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 ALS2CR12Q96Q35 445 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 CSRNP1Q96S65 589 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 DEF6Q9H4E7 631 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 RABGAP1Q9Y3P9 1069 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 CETN3O15182 167 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 PJA2O43164 708 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 RAD21O60216 631 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 EIF3JO75822 258 aaKnown RBP13.68□□□□□ -0.22
PTPN11-205ENST00000635625 GH2P01242 217 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 SSBP05455 408 aaKnown RBP eCLIP13.68□□□□□ -0.22
PTPN11-205ENST00000635625 KLK7P49862 253 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 STAT2P52630 851 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 KIF11P52732 1056 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 CACNB3P54284 484 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 AOC3Q16853 763 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 BMT2Q1RMZ1 405 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 HERC4Q5GLZ8 1057 aaPredicted RBP13.68□□□□□ -0.22
PTPN11-205ENST00000635625 TRIM59Q8IWR1 403 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 RTKN2Q8IZC4 609 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 PSMD1Q99460 953 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 IFIH1Q9BYX4 1025 aaKnown RBP13.68□□□□□ -0.22
PTPN11-205ENST00000635625 UBXN6Q9BZV1 441 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 KCTD10Q9H3F6 313 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 MMRN2Q9H8L6 949 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 ANKZF1Q9H8Y5 726 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 TUFT1Q9NNX1 390 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 KCNQ5Q9NR82 932 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 EMILIN3Q9NT22 766 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 PUF60Q9UHX1 559 aaKnown RBP13.68□□□□□ -0.22
PTPN11-205ENST00000635625 TSKSQ9UJT2 592 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 TRAF3IP3Q9Y228 551 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 JRKLQ9Y4A0 524 aa13.68□□□□□ -0.22
PTPN11-205ENST00000635625 ATP8B3O60423 1300 aa13.67□□□□□ -0.22
PTPN11-205ENST00000635625 UBE4BO95155 1302 aa13.67□□□□□ -0.22
PTPN11-205ENST00000635625 E9PMD0 336 aa13.67□□□□□ -0.22
PTPN11-205ENST00000635625 RBAK-RBAKDNI3L0D1 243 aa13.67□□□□□ -0.22
PTPN11-205ENST00000635625 PPIP5K2O43314 1243 aa13.67□□□□□ -0.22
PTPN11-205ENST00000635625 CALUO43852 315 aaPredicted RBP13.67□□□□□ -0.22
PTPN11-205ENST00000635625 TBC1D12O60347 775 aa13.67□□□□□ -0.22
PTPN11-205ENST00000635625 MED24O75448 989 aa13.67□□□□□ -0.22
PTPN11-205ENST00000635625 ANXA13P27216 316 aa13.67□□□□□ -0.22
PTPN11-205ENST00000635625 TERF2Q15554 542 aa13.67□□□□□ -0.22
PTPN11-205ENST00000635625 LONRF2Q1L5Z9 754 aa13.67□□□□□ -0.22
PTPN11-205ENST00000635625 MAP9Q49MG5 647 aa13.67□□□□□ -0.22
PTPN11-205ENST00000635625 PRR16Q569H4 304 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms