RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 MAMDC4Q6UXC1 1216 aa1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 PROSER1Q86XN7 944 aa1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 REXO1L1PQ8IX06 675 aa1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 Q8N1Y9 231 aa1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 CRACR2BQ8N4Y2 399 aaPredicted RBP1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 ZNF513Q8N8E2 541 aaPredicted RBP1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 RCBTB1Q8NDN9 531 aa1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 BVESQ8NE79 360 aa1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 PPIL4Q8WUA2 492 aaKnown RBP eCLIP1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 BTN2A2Q8WVV5 523 aa1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 TACO1Q9BSH4 297 aaKnown RBP1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 NR2E1Q9Y466 385 aa1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 PCDHGB7Q9Y5F8 929 aa1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 SLC12A7Q9Y666 1083 aa1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 SLC30A1Q9Y6M5 507 aa1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 ESYT3A0FGR9 886 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 MASP2O00187 686 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 ARNTLO00327 626 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 SLC27A2O14975 620 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 TBX1O43435 398 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 RPS6KA4O75676 772 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 CHGBP05060 677 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 PDE6AP16499 860 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 DNAJA1P31689 397 aaKnown RBP1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 KCNJ6P48051 423 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 GTF2A2P52657 109 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 EIF6P56537 245 aaKnown RBP1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 KRTAP10-9P60411 292 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 PFKPQ01813 784 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 HHEXQ03014 270 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 COL10A1Q03692 680 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 FOXL1Q12952 345 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 CRHR2Q13324 411 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 LSAMPQ13449 338 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 SF1Q15637 639 aaKnown RBP1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 CCDC27Q2M243 656 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 ZNF394Q53GI3 561 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 TMCO4Q5TGY1 634 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 ZKSCAN2Q63HK3 967 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 LAIR1Q6GTX8 287 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 VHLLQ6RSH7 139 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 Q6ZPA2 131 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 BHLHA9Q7RTU4 235 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 SGMS1Q86VZ5 419 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 TRIM59Q8IWR1 403 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 PPIL6Q8IXY8 311 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 GPR150Q8NGU9 434 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 PIP4K2CQ8TBX8 421 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 TMEM176AQ96HP8 235 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 APBA2Q99767 749 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 PRRX2Q99811 253 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 JAM3Q9BX67 310 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 CARD11Q9BXL7 1154 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 KATNBL1Q9H079 304 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 KIAA1683Q9H0B3 1180 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 NKX2-4Q9H2Z4 354 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 EPB41L1Q9H4G0 881 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 CYP26B1Q9NR63 512 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 KCND1Q9NSA2 647 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 CEP72Q9P209 647 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 ASH2LQ9UBL3 628 aa1.89□□□□□ -2.11
SMARCB1-209ENST00000635578 ABCC9O60706 1549 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 CAPN14A8MX76 684 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 H7BY64 318 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 MATN2O00339 956 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 KRIT1O00522 736 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 FOXN1O15353 648 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 MAFKO60675 156 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 LTFP02788 710 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 ERBB2P04626 1255 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 ITGAVP06756 1048 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 LTBRP36941 435 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 DUSP8Q13202 625 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 TUSC3Q13454 348 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 CD276Q5ZPR3 534 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 E4F1Q66K89 784 aaPredicted RBP1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 TRIM48Q8IWZ4 208 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 RPUSD2Q8IZ73 545 aaKnown RBP1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 D2HGDHQ8N465 521 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 C19orf47Q8N9M1 422 aaKnown RBP1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 PHOSPHO1Q8TCT1 267 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 CLEC4DQ8WXI8 215 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 BCL11AQ9H165 835 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 SMOC1Q9H4F8 434 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 GINM1Q9NU53 330 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 PARPBPQ9NWS1 579 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 PTGFRNQ9P2B2 879 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 HECAQ9UBI9 543 aaPredicted RBP1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 PUF60Q9UHX1 559 aaKnown RBP1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 EFR3BQ9Y2G0 817 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 GIT1Q9Y2X7 761 aa1.88□□□□□ -2.11
SMARCB1-209ENST00000635578 TMEM191CA6NGB0 347 aa1.87□□□□□ -2.11
SMARCB1-209ENST00000635578 ZNF839A8K0R7 811 aa1.87□□□□□ -2.11
SMARCB1-209ENST00000635578 KRTAP29-1A8MX34 341 aaPredicted RBP1.87□□□□□ -2.11
SMARCB1-209ENST00000635578 ARHGAP6O43182 974 aa1.87□□□□□ -2.11
SMARCB1-209ENST00000635578 IL18BPO95998 194 aa1.87□□□□□ -2.11
SMARCB1-209ENST00000635578 ENO2P09104 434 aaPredicted RBP1.87□□□□□ -2.11
SMARCB1-209ENST00000635578 NAT2P11245 290 aa1.87□□□□□ -2.11
SMARCB1-209ENST00000635578 COL6A2P12110 1019 aa1.87□□□□□ -2.11
SMARCB1-209ENST00000635578 FAHP16930 419 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms